RNA–Protein interactions for RNA: ENST00000570845.5

ATP2A3-208, Transcript of ATPase sarcoplasmic/endoplasmic reticulum Ca2+ transporting 3, human

TSL 1 (best)

Gene ATP2A3, Length 604 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ATP2A3-208	ENST00000570845	MTMR8	Q96EF0	704 aa		13.42	□□□□□ -0.26
ATP2A3-208	ENST00000570845	TBC1D32	Q96NH3	1257 aa		13.42	□□□□□ -0.26
ATP2A3-208	ENST00000570845	KIF2C	Q99661	725 aa		13.42	□□□□□ -0.26
ATP2A3-208	ENST00000570845	FBXO40	Q9UH90	709 aa		13.42	□□□□□ -0.26
ATP2A3-208	ENST00000570845	GJD2	Q9UKL4	321 aa		13.42	□□□□□ -0.26
ATP2A3-208	ENST00000570845	PNMA2	Q9UL42	364 aa		13.42	□□□□□ -0.26
ATP2A3-208	ENST00000570845	HPS5	Q9UPZ3	1129 aa		13.42	□□□□□ -0.26
ATP2A3-208	ENST00000570845	PNMA6F	A0A0J9YX94	578 aa		13.41	□□□□□ -0.26
ATP2A3-208	ENST00000570845	CYP2B6	P20813	491 aa		13.41	□□□□□ -0.26
ATP2A3-208	ENST00000570845	PDIA3	P30101	505 aa	Known RBP	13.41	□□□□□ -0.26
ATP2A3-208	ENST00000570845	CDC27	P30260	824 aa		13.41	□□□□□ -0.26
ATP2A3-208	ENST00000570845	RGS2	P41220	211 aa		13.41	□□□□□ -0.26
ATP2A3-208	ENST00000570845	STK3	Q13188	491 aa		13.41	□□□□□ -0.26
ATP2A3-208	ENST00000570845	PPP2R5B	Q15173	497 aa		13.41	□□□□□ -0.26
ATP2A3-208	ENST00000570845	NOL8	Q76FK4	1167 aa	Known RBP	13.41	□□□□□ -0.26
ATP2A3-208	ENST00000570845	USP6NL	Q92738	828 aa		13.41	□□□□□ -0.26
ATP2A3-208	ENST00000570845	RRP36	Q96EU6	259 aa	Known RBP	13.41	□□□□□ -0.26
ATP2A3-208	ENST00000570845	ZNF274	Q96GC6	653 aa	Predicted RBP	13.41	□□□□□ -0.26
ATP2A3-208	ENST00000570845	APBA2	Q99767	749 aa		13.41	□□□□□ -0.26
ATP2A3-208	ENST00000570845	AMN	Q9BXJ7	453 aa		13.41	□□□□□ -0.26
ATP2A3-208	ENST00000570845	SEC63	Q9UGP8	760 aa	Known RBP	13.41	□□□□□ -0.26
ATP2A3-208	ENST00000570845	ABCB11	O95342	1321 aa		13.4	□□□□□ -0.26
ATP2A3-208	ENST00000570845	CNTNAP5	Q8WYK1	1306 aa		13.4	□□□□□ -0.26
ATP2A3-208	ENST00000570845	CCDC196	A0A1B0GTZ2	297 aa		13.4	□□□□□ -0.26
ATP2A3-208	ENST00000570845	ADCY3	O60266	1144 aa		13.4	□□□□□ -0.26
ATP2A3-208	ENST00000570845	PPP1R11	O60927	126 aa	Predicted RBP	13.4	□□□□□ -0.26
ATP2A3-208	ENST00000570845	ADD1	P35611	737 aa	Known RBP	13.4	□□□□□ -0.26
ATP2A3-208	ENST00000570845	CCT2	P78371	535 aa	Known RBP	13.4	□□□□□ -0.26
ATP2A3-208	ENST00000570845	IRF5	Q13568	498 aa		13.4	□□□□□ -0.26
ATP2A3-208	ENST00000570845	SLC9C1	Q4G0N8	1177 aa		13.4	□□□□□ -0.26
ATP2A3-208	ENST00000570845	DHX30	Q7L2E3	1194 aa	Known RBP eCLIP	13.4	□□□□□ -0.26
ATP2A3-208	ENST00000570845	DPP9	Q86TI2	863 aa		13.4	□□□□□ -0.26
ATP2A3-208	ENST00000570845	ANKRD35	Q8N283	1001 aa		13.4	□□□□□ -0.26
ATP2A3-208	ENST00000570845	DDX11	Q96FC9	970 aa		13.4	□□□□□ -0.26
ATP2A3-208	ENST00000570845	NCOA5	Q9HCD5	579 aa	Known RBP	13.4	□□□□□ -0.26
ATP2A3-208	ENST00000570845	FAM217B	Q9NTX9	383 aa	Predicted RBP	13.4	□□□□□ -0.26
ATP2A3-208	ENST00000570845	PFAS	O15067	1338 aa		13.39	□□□□□ -0.27
ATP2A3-208	ENST00000570845	hCG_1642624	A0A1W2PR95	340 aa		13.39	□□□□□ -0.27
ATP2A3-208	ENST00000570845	NFIB	O00712	420 aa		13.39	□□□□□ -0.27
ATP2A3-208	ENST00000570845	COBL	O75128	1261 aa		13.39	□□□□□ -0.27
ATP2A3-208	ENST00000570845	PGK2	P07205	417 aa		13.39	□□□□□ -0.27
ATP2A3-208	ENST00000570845	XRCC5	P13010	732 aa	Known RBP	13.39	□□□□□ -0.27
ATP2A3-208	ENST00000570845	ELN	P15502	786 aa		13.39	□□□□□ -0.27
ATP2A3-208	ENST00000570845	GRK4	P32298	578 aa		13.39	□□□□□ -0.27
ATP2A3-208	ENST00000570845	RABEP1	Q15276	862 aa		13.39	□□□□□ -0.27
ATP2A3-208	ENST00000570845	NSMF	Q6X4W1	530 aa		13.39	□□□□□ -0.27
ATP2A3-208	ENST00000570845	TNS4	Q8IZW8	715 aa		13.39	□□□□□ -0.27
ATP2A3-208	ENST00000570845	SLAIN1	Q8ND83	568 aa		13.39	□□□□□ -0.27
ATP2A3-208	ENST00000570845	NPLOC4	Q8TAT6	608 aa		13.39	□□□□□ -0.27
ATP2A3-208	ENST00000570845	A1CF	Q9NQ94	594 aa	Known RBP	13.39	□□□□□ -0.27
ATP2A3-208	ENST00000570845	SLC5A4	Q9NY91	659 aa		13.39	□□□□□ -0.27
ATP2A3-208	ENST00000570845	TPCN1	Q9ULQ1	816 aa		13.39	□□□□□ -0.27
ATP2A3-208	ENST00000570845	PCDHA1	Q9Y5I3	950 aa		13.39	□□□□□ -0.27
ATP2A3-208	ENST00000570845	PTPDC1	A2A3K4	754 aa		13.38	□□□□□ -0.27
ATP2A3-208	ENST00000570845	FUT2	Q10981	343 aa		13.38	□□□□□ -0.27
ATP2A3-208	ENST00000570845	TRAF1	Q13077	416 aa		13.38	□□□□□ -0.27
ATP2A3-208	ENST00000570845	CCL14	Q16627	93 aa		13.38	□□□□□ -0.27
ATP2A3-208	ENST00000570845	PXYLP1	Q8TE99	480 aa		13.38	□□□□□ -0.27
ATP2A3-208	ENST00000570845	SH3TC2	Q8TF17	1288 aa		13.38	□□□□□ -0.27
ATP2A3-208	ENST00000570845	CLEC4D	Q8WXI8	215 aa		13.38	□□□□□ -0.27
ATP2A3-208	ENST00000570845	TRIB2	Q92519	343 aa		13.38	□□□□□ -0.27
ATP2A3-208	ENST00000570845	SLK	Q9H2G2	1235 aa	Predicted RBP	13.38	□□□□□ -0.27
ATP2A3-208	ENST00000570845	BIN2	Q9UBW5	565 aa	Predicted RBP	13.38	□□□□□ -0.27
ATP2A3-208	ENST00000570845	MRPL11	Q9Y3B7	192 aa	Known RBP	13.38	□□□□□ -0.27
ATP2A3-208	ENST00000570845	DNAJC25-GNG10	A0A024R161	153 aa		13.37	□□□□□ -0.27
ATP2A3-208	ENST00000570845	CPLX1	O14810	134 aa		13.37	□□□□□ -0.27
ATP2A3-208	ENST00000570845	LARGE1	O95461	756 aa		13.37	□□□□□ -0.27
ATP2A3-208	ENST00000570845	HOXC6	P09630	235 aa		13.37	□□□□□ -0.27
ATP2A3-208	ENST00000570845	ZNF792	Q3KQV3	632 aa		13.37	□□□□□ -0.27
ATP2A3-208	ENST00000570845	SLC30A10	Q6XR72	485 aa		13.37	□□□□□ -0.27
ATP2A3-208	ENST00000570845	RNF207	Q6ZRF8	634 aa		13.37	□□□□□ -0.27
ATP2A3-208	ENST00000570845	TRMT44	Q8IYL2	757 aa	Known RBP	13.37	□□□□□ -0.27
ATP2A3-208	ENST00000570845	MAML3	Q96JK9	1138 aa		13.37	□□□□□ -0.27
ATP2A3-208	ENST00000570845	CYP39A1	Q9NYL5	469 aa		13.37	□□□□□ -0.27
ATP2A3-208	ENST00000570845	FLRT1	Q9NZU1	646 aa		13.37	□□□□□ -0.27
ATP2A3-208	ENST00000570845		V9GY48	417 aa	Predicted RBP	13.37	□□□□□ -0.27
ATP2A3-208	ENST00000570845	BRCA2	P51587	3418 aa		13.37	□□□□□ -0.27
ATP2A3-208	ENST00000570845	MYH9	P35579	1960 aa	Known RBP	13.36	□□□□□ -0.27
ATP2A3-208	ENST00000570845	KAT6A	Q92794	2004 aa		13.36	□□□□□ -0.27
ATP2A3-208	ENST00000570845	POTEB2	H3BUK9	544 aa		13.36	□□□□□ -0.27
ATP2A3-208	ENST00000570845	ST18	O60284	1047 aa		13.36	□□□□□ -0.27
ATP2A3-208	ENST00000570845	PFKFB2	O60825	505 aa		13.36	□□□□□ -0.27
ATP2A3-208	ENST00000570845	PPFIA3	O75145	1194 aa		13.36	□□□□□ -0.27
ATP2A3-208	ENST00000570845	HMGCR	P04035	888 aa		13.36	□□□□□ -0.27
ATP2A3-208	ENST00000570845	INHA	P05111	366 aa		13.36	□□□□□ -0.27
ATP2A3-208	ENST00000570845	IFNAR1	P17181	557 aa		13.36	□□□□□ -0.27
ATP2A3-208	ENST00000570845	CALML3	P27482	149 aa		13.36	□□□□□ -0.27
ATP2A3-208	ENST00000570845	CNTN2	Q02246	1040 aa		13.36	□□□□□ -0.27
ATP2A3-208	ENST00000570845	SCRN1	Q12765	414 aa		13.36	□□□□□ -0.27
ATP2A3-208	ENST00000570845	BAAT	Q14032	418 aa	Predicted RBP	13.36	□□□□□ -0.27
ATP2A3-208	ENST00000570845	NTRK3	Q16288	839 aa		13.36	□□□□□ -0.27
ATP2A3-208	ENST00000570845	ME3	Q16798	604 aa		13.36	□□□□□ -0.27
ATP2A3-208	ENST00000570845	HEATR3	Q7Z4Q2	680 aa		13.36	□□□□□ -0.27
ATP2A3-208	ENST00000570845	MCF2L2	Q86YR7	1114 aa		13.36	□□□□□ -0.27
ATP2A3-208	ENST00000570845	GPKOW	Q92917	476 aa	Predicted RBP eCLIP	13.36	□□□□□ -0.27
ATP2A3-208	ENST00000570845	PHKB	Q93100	1093 aa		13.36	□□□□□ -0.27
ATP2A3-208	ENST00000570845	DIS3	Q9Y2L1	958 aa	Known RBP	13.36	□□□□□ -0.27
ATP2A3-208	ENST00000570845	MYH15	Q9Y2K3	1946 aa		13.36	□□□□□ -0.27
ATP2A3-208	ENST00000570845	OPLAH	O14841	1288 aa		13.35	□□□□□ -0.27
ATP2A3-208	ENST00000570845	CFB	P00751	764 aa		13.35	□□□□□ -0.27

Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms