RNA–Protein interactions for RNA: ENST00000570668.1

SMG6-206, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 4

Gene SMG6, Length 547 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-206ENST00000570668 MAD2L2Q9UI95 211 aa13□□□□□ -0.33
SMG6-206ENST00000570668 CNPY2Q9Y2B0 182 aa13□□□□□ -0.33
SMG6-206ENST00000570668 FRMPD3Q5JV73 1810 aa12.99□□□□□ -0.33
SMG6-206ENST00000570668 SOWAHBA6NEL2 793 aa12.99□□□□□ -0.33
SMG6-206ENST00000570668 KLRF2D3W0D1 207 aa12.99□□□□□ -0.33
SMG6-206ENST00000570668 NFIBO00712 420 aa12.99□□□□□ -0.33
SMG6-206ENST00000570668 PRC1O43663 620 aa12.99□□□□□ -0.33
SMG6-206ENST00000570668 GRM4Q14833 912 aa12.99□□□□□ -0.33
SMG6-206ENST00000570668 CDC37Q16543 378 aaPredicted RBP12.99□□□□□ -0.33
SMG6-206ENST00000570668 NSMFQ6X4W1 530 aa12.99□□□□□ -0.33
SMG6-206ENST00000570668 TMTC2Q8N394 836 aa12.99□□□□□ -0.33
SMG6-206ENST00000570668 LY9Q9HBG7 655 aa12.99□□□□□ -0.33
SMG6-206ENST00000570668 CDKN2AIPQ9NXV6 580 aaPredicted RBP12.99□□□□□ -0.33
SMG6-206ENST00000570668 MCM3APO60318 1980 aa12.98□□□□□ -0.33
SMG6-206ENST00000570668 SH2B2O14492 632 aaPredicted RBP12.98□□□□□ -0.33
SMG6-206ENST00000570668 DHX16O60231 1041 aaKnown RBP12.98□□□□□ -0.33
SMG6-206ENST00000570668 COL6A1P12109 1028 aa12.98□□□□□ -0.33
SMG6-206ENST00000570668 LIFRP42702 1097 aa12.98□□□□□ -0.33
SMG6-206ENST00000570668 BAATQ14032 418 aaPredicted RBP12.98□□□□□ -0.33
SMG6-206ENST00000570668 QRICH1Q2TAL8 776 aa12.98□□□□□ -0.33
SMG6-206ENST00000570668 ANO1Q5XXA6 986 aa12.98□□□□□ -0.33
SMG6-206ENST00000570668 ARMCX2Q7L311 632 aa12.98□□□□□ -0.33
SMG6-206ENST00000570668 CATIPQ7Z7H3 387 aa12.98□□□□□ -0.33
SMG6-206ENST00000570668 CCDC144CPQ8IYA2 1237 aa12.98□□□□□ -0.33
SMG6-206ENST00000570668 RASEFQ8IZ41 740 aa12.98□□□□□ -0.33
SMG6-206ENST00000570668 ARRDC4Q8NCT1 418 aa12.98□□□□□ -0.33
SMG6-206ENST00000570668 RGS22Q8NE09 1264 aa12.98□□□□□ -0.33
SMG6-206ENST00000570668 MTMR8Q96EF0 704 aa12.98□□□□□ -0.33
SMG6-206ENST00000570668 NEK1Q96PY6 1258 aa12.98□□□□□ -0.33
SMG6-206ENST00000570668 MAP3K14Q99558 947 aa12.98□□□□□ -0.33
SMG6-206ENST00000570668 MAF1Q9H063 256 aa12.98□□□□□ -0.33
SMG6-206ENST00000570668 ABHD16BQ9H3Z7 469 aa12.98□□□□□ -0.33
SMG6-206ENST00000570668 C11orf49Q9H6J7 331 aa12.98□□□□□ -0.33
SMG6-206ENST00000570668 VAT1LQ9HCJ6 419 aa12.98□□□□□ -0.33
SMG6-206ENST00000570668 GPHNQ9NQX3 736 aaPredicted RBP12.98□□□□□ -0.33
SMG6-206ENST00000570668 DNAH12Q6ZR08 3092 aa12.98□□□□□ -0.33
SMG6-206ENST00000570668 ASTN1O14525 1302 aa12.97□□□□□ -0.33
SMG6-206ENST00000570668 LOC102724159A0A0B4J2E5 919 aa12.97□□□□□ -0.33
SMG6-206ENST00000570668 ASB14A6NK59 587 aa12.97□□□□□ -0.33
SMG6-206ENST00000570668 DNM1LO00429 736 aa12.97□□□□□ -0.33
SMG6-206ENST00000570668 DDAH1O94760 285 aa12.97□□□□□ -0.33
SMG6-206ENST00000570668 REC8O95072 547 aa12.97□□□□□ -0.33
SMG6-206ENST00000570668 RARBP10826 455 aa12.97□□□□□ -0.33
SMG6-206ENST00000570668 AKR1A1P14550 325 aa12.97□□□□□ -0.33
SMG6-206ENST00000570668 ACVR2BQ13705 512 aa12.97□□□□□ -0.33
SMG6-206ENST00000570668 KRT32Q14532 448 aa12.97□□□□□ -0.33
SMG6-206ENST00000570668 PWP2Q15269 919 aaKnown RBP12.97□□□□□ -0.33
SMG6-206ENST00000570668 SLC35G1Q2M3R5 365 aa12.97□□□□□ -0.33
SMG6-206ENST00000570668 USH1GQ495M9 461 aa12.97□□□□□ -0.33
SMG6-206ENST00000570668 RNF207Q6ZRF8 634 aa12.97□□□□□ -0.33
SMG6-206ENST00000570668 ZNF654Q8IZM8 581 aa12.97□□□□□ -0.33
SMG6-206ENST00000570668 DPF3Q92784 378 aa12.97□□□□□ -0.33
SMG6-206ENST00000570668 KCNB2Q92953 911 aa12.97□□□□□ -0.33
SMG6-206ENST00000570668 KATNBL1Q9H079 304 aa12.97□□□□□ -0.33
SMG6-206ENST00000570668 RIOX1Q9H6W3 641 aa12.97□□□□□ -0.33
SMG6-206ENST00000570668 BAZ2BQ9UIF8 2168 aaKnown RBP12.97□□□□□ -0.33
SMG6-206ENST00000570668 LCTP09848 1927 aa12.96□□□□□ -0.33
SMG6-206ENST00000570668 MYH6P13533 1939 aa12.96□□□□□ -0.33
SMG6-206ENST00000570668 ABCB11O95342 1321 aa12.96□□□□□ -0.33
SMG6-206ENST00000570668 PTPDC1A2A3K4 754 aa12.96□□□□□ -0.33
SMG6-206ENST00000570668 ZBTB5O15062 677 aa12.96□□□□□ -0.33
SMG6-206ENST00000570668 EPB41L2O43491 1005 aaKnown RBP12.96□□□□□ -0.33
SMG6-206ENST00000570668 CYTH3O43739 400 aa12.96□□□□□ -0.33
SMG6-206ENST00000570668 HSPA4P34932 840 aa12.96□□□□□ -0.33
SMG6-206ENST00000570668 RPS6P62753 249 aaKnown RBP12.96□□□□□ -0.33
SMG6-206ENST00000570668 EXOSC10Q01780 885 aaKnown RBP12.96□□□□□ -0.33
SMG6-206ENST00000570668 ADCK5Q3MIX3 580 aa12.96□□□□□ -0.33
SMG6-206ENST00000570668 SLC30A10Q6XR72 485 aa12.96□□□□□ -0.33
SMG6-206ENST00000570668 SGMS1Q86VZ5 419 aa12.96□□□□□ -0.33
SMG6-206ENST00000570668 FBXO11Q86XK2 927 aa12.96□□□□□ -0.33
SMG6-206ENST00000570668 MORC4Q8TE76 937 aa12.96□□□□□ -0.33
SMG6-206ENST00000570668 NUP133Q8WUM0 1156 aa12.96□□□□□ -0.33
SMG6-206ENST00000570668 PURBQ96QR8 312 aaKnown RBP12.96□□□□□ -0.33
SMG6-206ENST00000570668 AMNQ9BXJ7 453 aa12.96□□□□□ -0.33
SMG6-206ENST00000570668 ADD3Q9UEY8 706 aaKnown RBP12.96□□□□□ -0.33
SMG6-206ENST00000570668 ZHX1Q9UKY1 873 aaPredicted RBP12.96□□□□□ -0.33
SMG6-206ENST00000570668 FAM184BQ9ULE4 1060 aa12.96□□□□□ -0.33
SMG6-206ENST00000570668 CCDC69A6NI79 296 aa12.95□□□□□ -0.34
SMG6-206ENST00000570668 SMARCA1P28370 1054 aa12.95□□□□□ -0.34
SMG6-206ENST00000570668 KIF5BP33176 963 aa12.95□□□□□ -0.34
SMG6-206ENST00000570668 GJC2Q5T442 439 aaPredicted RBP12.95□□□□□ -0.34
SMG6-206ENST00000570668 NFXL1Q6ZNB6 911 aa12.95□□□□□ -0.34
SMG6-206ENST00000570668 DHX32Q7L7V1 743 aaKnown RBP12.95□□□□□ -0.34
SMG6-206ENST00000570668 CTCFLQ8NI51 663 aaPredicted RBP12.95□□□□□ -0.34
SMG6-206ENST00000570668 MYL10Q9BUA6 226 aa12.95□□□□□ -0.34
SMG6-206ENST00000570668 LRRC2Q9BYS8 371 aa12.95□□□□□ -0.34
SMG6-206ENST00000570668 XPNPEP3Q9NQH7 507 aa12.95□□□□□ -0.34
SMG6-206ENST00000570668 MRPL11Q9Y3B7 192 aaKnown RBP12.95□□□□□ -0.34
SMG6-206ENST00000570668 NR2E3Q9Y5X4 410 aa12.95□□□□□ -0.34
SMG6-206ENST00000570668 EVI5O60447 810 aa12.94□□□□□ -0.34
SMG6-206ENST00000570668 PPP1R11O60927 126 aaPredicted RBP12.94□□□□□ -0.34
SMG6-206ENST00000570668 ADAMTS4O75173 837 aa12.94□□□□□ -0.34
SMG6-206ENST00000570668 DUSP11O75319 330 aaKnown RBP12.94□□□□□ -0.34
SMG6-206ENST00000570668 HMGB1P09429 215 aaKnown RBP12.94□□□□□ -0.34
SMG6-206ENST00000570668 CALM1P0DP23 149 aa12.94□□□□□ -0.34
SMG6-206ENST00000570668 CALM2P0DP24 149 aa12.94□□□□□ -0.34
SMG6-206ENST00000570668 CALM3P0DP25 149 aa12.94□□□□□ -0.34
SMG6-206ENST00000570668 CALML3P27482 149 aa12.94□□□□□ -0.34
SMG6-206ENST00000570668 ALDH5A1P51649 535 aaPredicted RBP12.94□□□□□ -0.34
SMG6-206ENST00000570668 TRAF1Q13077 416 aa12.94□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms