RNA–Protein interactions for RNA: ENST00000569899.5

GDE1-205, Transcript of glycerophosphodiester phosphodiesterase 1, humanhuman

TSL 4

Gene GDE1, Length 1,618 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GDE1-205ENST00000569899 CABP5Q9NP86 173 aa11.59□□□□□ -0.55
GDE1-205ENST00000569899 NYAP2Q9P242 653 aa11.59□□□□□ -0.55
GDE1-205ENST00000569899 FZD1Q9UP38 647 aa11.59□□□□□ -0.55
GDE1-205ENST00000569899 PPP2R3BQ9Y5P8 575 aa11.59□□□□□ -0.55
GDE1-205ENST00000569899 PTPRFP10586 1907 aa11.58□□□□□ -0.56
GDE1-205ENST00000569899 FRMPD2Q68DX3 1309 aaPredicted RBP11.58□□□□□ -0.56
GDE1-205ENST00000569899 hCG_1642624A0A1W2PR95 340 aa11.58□□□□□ -0.56
GDE1-205ENST00000569899 USP17L5A8MUK1 530 aa11.58□□□□□ -0.56
GDE1-205ENST00000569899 PHF20L1A8MW92 1017 aa11.58□□□□□ -0.56
GDE1-205ENST00000569899 POTECB2RU33 542 aa11.58□□□□□ -0.56
GDE1-205ENST00000569899 F13A1P00488 732 aa11.58□□□□□ -0.56
GDE1-205ENST00000569899 GOLGA8HP0CJ92 632 aa11.58□□□□□ -0.56
GDE1-205ENST00000569899 CAP2P40123 477 aa11.58□□□□□ -0.56
GDE1-205ENST00000569899 SLC35G1Q2M3R5 365 aa11.58□□□□□ -0.56
GDE1-205ENST00000569899 OTUD7BQ6GQQ9 843 aa11.58□□□□□ -0.56
GDE1-205ENST00000569899 USP17L2Q6R6M4 530 aa11.58□□□□□ -0.56
GDE1-205ENST00000569899 DLK2Q6UY11 383 aa11.58□□□□□ -0.56
GDE1-205ENST00000569899 USP50Q70EL3 339 aaPredicted RBP11.58□□□□□ -0.56
GDE1-205ENST00000569899 CCDC84Q86UT8 332 aaPredicted RBP11.58□□□□□ -0.56
GDE1-205ENST00000569899 FERMT3Q86UX7 667 aa11.58□□□□□ -0.56
GDE1-205ENST00000569899 SIAH1Q8IUQ4 282 aa11.58□□□□□ -0.56
GDE1-205ENST00000569899 TRIM22Q8IYM9 498 aa11.58□□□□□ -0.56
GDE1-205ENST00000569899 ALG1Q9BT22 464 aa11.58□□□□□ -0.56
GDE1-205ENST00000569899 RNF26Q9BY78 433 aaPredicted RBP11.58□□□□□ -0.56
GDE1-205ENST00000569899 TAF1DQ9H5J8 278 aaPredicted RBP11.58□□□□□ -0.56
GDE1-205ENST00000569899 GJB4Q9NTQ9 266 aa11.58□□□□□ -0.56
GDE1-205ENST00000569899 PARP14Q460N5 1801 aa11.58□□□□□ -0.56
GDE1-205ENST00000569899 IQCA1LA6NCM1 817 aa11.57□□□□□ -0.56
GDE1-205ENST00000569899 PALM3A6NDB9 673 aaPredicted RBP11.57□□□□□ -0.56
GDE1-205ENST00000569899 H3BQV1 296 aa11.57□□□□□ -0.56
GDE1-205ENST00000569899 PARP1P09874 1014 aaKnown RBP11.57□□□□□ -0.56
GDE1-205ENST00000569899 SNHG28P0DPA3 235 aa11.57□□□□□ -0.56
GDE1-205ENST00000569899 EAPPQ56P03 285 aaPredicted RBP11.57□□□□□ -0.56
GDE1-205ENST00000569899 DCAF15Q66K64 600 aa11.57□□□□□ -0.56
GDE1-205ENST00000569899 DCPSQ96C86 337 aaKnown RBP11.57□□□□□ -0.56
GDE1-205ENST00000569899 C8orf76Q96K31 380 aa11.57□□□□□ -0.56
GDE1-205ENST00000569899 UNC93B1Q9H1C4 597 aa11.57□□□□□ -0.56
GDE1-205ENST00000569899 CPVLQ9H3G5 476 aa11.57□□□□□ -0.56
GDE1-205ENST00000569899 GDPD2Q9HCC8 539 aa11.57□□□□□ -0.56
GDE1-205ENST00000569899 A0A1W2PRG0 241 aa11.57□□□□□ -0.56
GDE1-205ENST00000569899 DEXIO95424 95 aa11.57□□□□□ -0.56
GDE1-205ENST00000569899 INPP5BP32019 993 aa11.57□□□□□ -0.56
GDE1-205ENST00000569899 ECE1P42892 770 aa11.57□□□□□ -0.56
GDE1-205ENST00000569899 NFKBIBQ15653 356 aa11.57□□□□□ -0.56
GDE1-205ENST00000569899 CCDC96Q2M329 555 aa11.57□□□□□ -0.56
GDE1-205ENST00000569899 FOXD4L6Q3SYB3 417 aaPredicted RBP11.57□□□□□ -0.56
GDE1-205ENST00000569899 FOXD4L3Q6VB84 417 aaPredicted RBP11.57□□□□□ -0.56
GDE1-205ENST00000569899 PIBF1Q8WXW3 757 aa11.57□□□□□ -0.56
GDE1-205ENST00000569899 ZNF341Q9BYN7 854 aa11.57□□□□□ -0.56
GDE1-205ENST00000569899 PRPF3O43395 683 aaKnown RBP11.56□□□□□ -0.56
GDE1-205ENST00000569899 CYTH3O43739 400 aa11.56□□□□□ -0.56
GDE1-205ENST00000569899 RAD21O60216 631 aa11.56□□□□□ -0.56
GDE1-205ENST00000569899 GPR37L1O60883 481 aa11.56□□□□□ -0.56
GDE1-205ENST00000569899 BAG4O95429 457 aaKnown RBP11.56□□□□□ -0.56
GDE1-205ENST00000569899 ASNSP08243 561 aa11.56□□□□□ -0.56
GDE1-205ENST00000569899 GNAQP50148 359 aa11.56□□□□□ -0.56
GDE1-205ENST00000569899 ZNF543Q08ER8 600 aa11.56□□□□□ -0.56
GDE1-205ENST00000569899 RESTQ13127 1097 aa11.56□□□□□ -0.56
GDE1-205ENST00000569899 PKN1Q16512 942 aa11.56□□□□□ -0.56
GDE1-205ENST00000569899 ASPRV1Q53RT3 343 aa11.56□□□□□ -0.56
GDE1-205ENST00000569899 KRT26Q7Z3Y9 468 aa11.56□□□□□ -0.56
GDE1-205ENST00000569899 ACER1Q8TDN7 264 aa11.56□□□□□ -0.56
GDE1-205ENST00000569899 MKL1Q969V6 931 aa11.56□□□□□ -0.56
GDE1-205ENST00000569899 SHISA4Q96DD7 197 aa11.56□□□□□ -0.56
GDE1-205ENST00000569899 HOOK2Q96ED9 719 aa11.56□□□□□ -0.56
GDE1-205ENST00000569899 WRNIP1Q96S55 665 aa11.56□□□□□ -0.56
GDE1-205ENST00000569899 GLIS2Q9BZE0 524 aaPredicted RBP11.56□□□□□ -0.56
GDE1-205ENST00000569899 ARHGEF10LQ9HCE6 1279 aa11.56□□□□□ -0.56
GDE1-205ENST00000569899 KLRF2D3W0D1 207 aa11.55□□□□□ -0.56
GDE1-205ENST00000569899 NDUFB10O96000 172 aa11.55□□□□□ -0.56
GDE1-205ENST00000569899 AKAP17AQ02040 695 aaKnown RBP11.55□□□□□ -0.56
GDE1-205ENST00000569899 SLFN13Q68D06 897 aa11.55□□□□□ -0.56
GDE1-205ENST00000569899 KRT40Q6A162 431 aa11.55□□□□□ -0.56
GDE1-205ENST00000569899 KCTD1Q719H9 257 aa11.55□□□□□ -0.56
GDE1-205ENST00000569899 FBXO18Q8NFZ0 1043 aa11.55□□□□□ -0.56
GDE1-205ENST00000569899 WASF1Q92558 559 aa11.55□□□□□ -0.56
GDE1-205ENST00000569899 GBP4Q96PP9 640 aa11.55□□□□□ -0.56
GDE1-205ENST00000569899 SPZ1Q9BXG8 430 aa11.55□□□□□ -0.56
GDE1-205ENST00000569899 ISY1Q9ULR0 285 aaKnown RBP11.55□□□□□ -0.56
GDE1-205ENST00000569899 V9GY48 417 aaPredicted RBP11.55□□□□□ -0.56
GDE1-205ENST00000569899 CTNND1O60716 968 aaKnown RBP11.54□□□□□ -0.56
GDE1-205ENST00000569899 PDIA4P13667 645 aaKnown RBP11.54□□□□□ -0.56
GDE1-205ENST00000569899 PRKG1Q13976 671 aa11.54□□□□□ -0.56
GDE1-205ENST00000569899 ZYXQ15942 572 aaKnown RBP11.54□□□□□ -0.56
GDE1-205ENST00000569899 KIAA1755Q5JYT7 1200 aa11.54□□□□□ -0.56
GDE1-205ENST00000569899 TTBK2Q6IQ55 1244 aa11.54□□□□□ -0.56
GDE1-205ENST00000569899 FAM173BQ6P4H8 233 aa11.54□□□□□ -0.56
GDE1-205ENST00000569899 CLEC17AQ6ZS10 378 aa11.54□□□□□ -0.56
GDE1-205ENST00000569899 USP48Q86UV5 1035 aa11.54□□□□□ -0.56
GDE1-205ENST00000569899 GMCL1P1Q8NEA9 526 aa11.54□□□□□ -0.56
GDE1-205ENST00000569899 DCAF4Q8WV16 495 aa11.54□□□□□ -0.56
GDE1-205ENST00000569899 NUP88Q99567 741 aaPredicted RBP11.54□□□□□ -0.56
GDE1-205ENST00000569899 UBA5Q9GZZ9 404 aa11.54□□□□□ -0.56
GDE1-205ENST00000569899 VPS54Q9P1Q0 977 aa11.54□□□□□ -0.56
GDE1-205ENST00000569899 FKBPLQ9UIM3 349 aa11.54□□□□□ -0.56
GDE1-205ENST00000569899 ZNF112Q9UJU3 913 aa11.54□□□□□ -0.56
GDE1-205ENST00000569899 KIF28PB7ZC32 967 aa11.53□□□□□ -0.56
GDE1-205ENST00000569899 F5H6K3 240 aa11.53□□□□□ -0.56
GDE1-205ENST00000569899 SCG2P13521 617 aa11.53□□□□□ -0.56
GDE1-205ENST00000569899 VEGFAP15692 232 aaPredicted RBP11.53□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 64.8 ms