RNA–Protein interactions for RNA: ENST00000569624.5

CDH11-217, Transcript of cadherin 11, humanhuman

TSL 4

Gene CDH11, Length 584 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH11-217ENST00000569624 DEFB128Q7Z7B8 93 aa15.38■□□□□ 0.05
CDH11-217ENST00000569624 AACSQ86V21 672 aa15.38■□□□□ 0.05
CDH11-217ENST00000569624 GJD3Q8N144 294 aa15.38■□□□□ 0.05
CDH11-217ENST00000569624 CLUAP1Q96AJ1 413 aa15.38■□□□□ 0.05
CDH11-217ENST00000569624 KCNH6Q9H252 994 aa15.38■□□□□ 0.05
CDH11-217ENST00000569624 RAVER2Q9HCJ3 691 aaKnown RBP15.38■□□□□ 0.05
CDH11-217ENST00000569624 Q9Y3F1 56 aa15.38■□□□□ 0.05
CDH11-217ENST00000569624 PTPRSQ13332 1948 aa15.38■□□□□ 0.05
CDH11-217ENST00000569624 ZBED9Q6R2W3 1325 aa15.38■□□□□ 0.05
CDH11-217ENST00000569624 ASB14A6NK59 587 aa15.37■□□□□ 0.05
CDH11-217ENST00000569624 USP17L12C9JPN9 530 aa15.37■□□□□ 0.05
CDH11-217ENST00000569624 USP17L21D6R901 530 aa15.37■□□□□ 0.05
CDH11-217ENST00000569624 F5H6K3 240 aa15.37■□□□□ 0.05
CDH11-217ENST00000569624 DYNC1LI2O43237 492 aaPredicted RBP15.37■□□□□ 0.05
CDH11-217ENST00000569624 MBD4O95243 580 aa15.37■□□□□ 0.05
CDH11-217ENST00000569624 ALADP13716 330 aa15.37■□□□□ 0.05
CDH11-217ENST00000569624 SMPD1P17405 629 aa15.37■□□□□ 0.05
CDH11-217ENST00000569624 KLRC3Q07444 240 aa15.37■□□□□ 0.05
CDH11-217ENST00000569624 FAM178BQ8IXR5 827 aa15.37■□□□□ 0.05
CDH11-217ENST00000569624 TMEM57Q8N5G2 664 aa15.37■□□□□ 0.05
CDH11-217ENST00000569624 NYAP2Q9P242 653 aa15.37■□□□□ 0.05
CDH11-217ENST00000569624 TNKSO95271 1327 aa15.37■□□□□ 0.05
CDH11-217ENST00000569624 SCN10AQ9Y5Y9 1956 aa15.36■□□□□ 0.05
CDH11-217ENST00000569624 GOLIM4O00461 696 aa15.36■□□□□ 0.05
CDH11-217ENST00000569624 CYP2C9P11712 490 aa15.36■□□□□ 0.05
CDH11-217ENST00000569624 SPRED2Q7Z698 418 aa15.36■□□□□ 0.05
CDH11-217ENST00000569624 ERC1Q8IUD2 1116 aa15.36■□□□□ 0.05
CDH11-217ENST00000569624 PPIL4Q8WUA2 492 aaKnown RBP eCLIP15.36■□□□□ 0.05
CDH11-217ENST00000569624 FRAT1Q92837 279 aaPredicted RBP15.36■□□□□ 0.05
CDH11-217ENST00000569624 KIFC2Q96AC6 838 aa15.36■□□□□ 0.05
CDH11-217ENST00000569624 DDRGK1Q96HY6 314 aa15.36■□□□□ 0.05
CDH11-217ENST00000569624 C1orf115Q9H7X2 142 aa15.36■□□□□ 0.05
CDH11-217ENST00000569624 UBE2ZQ9H832 354 aaPredicted RBP15.36■□□□□ 0.05
CDH11-217ENST00000569624 TRMT13Q9NUP7 481 aaKnown RBP15.36■□□□□ 0.05
CDH11-217ENST00000569624 ZDBF2Q9HCK1 2354 aa15.35■□□□□ 0.05
CDH11-217ENST00000569624 MYH7P12883 1935 aa15.35■□□□□ 0.05
CDH11-217ENST00000569624 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP15.35■□□□□ 0.05
CDH11-217ENST00000569624 PITPNM1O00562 1244 aa15.35■□□□□ 0.05
CDH11-217ENST00000569624 BAIAP3O94812 1187 aa15.35■□□□□ 0.05
CDH11-217ENST00000569624 PTGS1P23219 599 aa15.35■□□□□ 0.05
CDH11-217ENST00000569624 CSPP1Q1MSJ5 1256 aa15.35■□□□□ 0.05
CDH11-217ENST00000569624 LEXMQ3ZCV2 418 aa15.35■□□□□ 0.05
CDH11-217ENST00000569624 IQSEC1Q6DN90 963 aa15.35■□□□□ 0.05
CDH11-217ENST00000569624 ACAD9Q9H845 621 aa15.35■□□□□ 0.05
CDH11-217ENST00000569624 A1CFQ9NQ94 594 aaKnown RBP15.35■□□□□ 0.05
CDH11-217ENST00000569624 HOMER2Q9NSB8 354 aa15.35■□□□□ 0.05
CDH11-217ENST00000569624 FEM1BQ9UK73 627 aa15.35■□□□□ 0.05
CDH11-217ENST00000569624 C5orf42Q9H799 3197 aa15.34■□□□□ 0.05
CDH11-217ENST00000569624 SOWAHBA6NEL2 793 aa15.34■□□□□ 0.05
CDH11-217ENST00000569624 FDX1P10109 184 aa15.34■□□□□ 0.05
CDH11-217ENST00000569624 ADD2P35612 726 aa15.34■□□□□ 0.05
CDH11-217ENST00000569624 TAPT1Q6NXT6 567 aa15.34■□□□□ 0.05
CDH11-217ENST00000569624 GDPD5Q8WTR4 605 aa15.34■□□□□ 0.05
CDH11-217ENST00000569624 UIMC1Q96RL1 719 aa15.34■□□□□ 0.05
CDH11-217ENST00000569624 DNAJC2Q99543 621 aaKnown RBP15.34■□□□□ 0.05
CDH11-217ENST00000569624 POLR3EQ9NVU0 708 aa15.34■□□□□ 0.05
CDH11-217ENST00000569624 COG6Q9Y2V7 657 aa15.34■□□□□ 0.05
CDH11-217ENST00000569624 LCTP09848 1927 aa15.34■□□□□ 0.05
CDH11-217ENST00000569624 SIP14410 1827 aa15.33■□□□□ 0.05
CDH11-217ENST00000569624 CACNA1AO00555 2505 aa15.33■□□□□ 0.04
CDH11-217ENST00000569624 RASA1P20936 1047 aa15.33■□□□□ 0.04
CDH11-217ENST00000569624 SSTR3P32745 418 aaPredicted RBP15.33■□□□□ 0.04
CDH11-217ENST00000569624 CTR9Q6PD62 1173 aa15.33■□□□□ 0.04
CDH11-217ENST00000569624 FBXO16Q8IX29 292 aaPredicted RBP15.33■□□□□ 0.04
CDH11-217ENST00000569624 FBXL18Q96ME1 805 aa15.33■□□□□ 0.04
CDH11-217ENST00000569624 PDGFCQ9NRA1 345 aa15.33■□□□□ 0.04
CDH11-217ENST00000569624 ARPP21Q9UBL0 812 aaPredicted RBP15.33■□□□□ 0.04
CDH11-217ENST00000569624 SYNPO2Q9UMS6 1093 aa15.33■□□□□ 0.04
CDH11-217ENST00000569624 LCHNA4D1U4 455 aa15.32■□□□□ 0.04
CDH11-217ENST00000569624 IQCF3P0C7M6 154 aa15.32■□□□□ 0.04
CDH11-217ENST00000569624 KCNJ6P48051 423 aa15.32■□□□□ 0.04
CDH11-217ENST00000569624 PURAQ00577 322 aaKnown RBP15.32■□□□□ 0.04
CDH11-217ENST00000569624 GADD45GIP1Q8TAE8 222 aaPredicted RBP15.32■□□□□ 0.04
CDH11-217ENST00000569624 FTOQ9C0B1 505 aaKnown RBP eCLIP15.32■□□□□ 0.04
CDH11-217ENST00000569624 VTA1Q9NP79 307 aa15.32■□□□□ 0.04
CDH11-217ENST00000569624 RNF146Q9NTX7 359 aa15.32■□□□□ 0.04
CDH11-217ENST00000569624 EXOC6BQ9Y2D4 811 aa15.32■□□□□ 0.04
CDH11-217ENST00000569624 SPTBN4Q9H254 2564 aa15.32■□□□□ 0.04
CDH11-217ENST00000569624 ZNF536O15090 1300 aa15.32■□□□□ 0.04
CDH11-217ENST00000569624 TRIP12Q14669 1992 aaPredicted RBP15.31■□□□□ 0.04
CDH11-217ENST00000569624 IGKV6D-41A0A0C4DH26 115 aa15.31■□□□□ 0.04
CDH11-217ENST00000569624 DCXO43602 365 aa15.31■□□□□ 0.04
CDH11-217ENST00000569624 KCNA5P22460 613 aa15.31■□□□□ 0.04
CDH11-217ENST00000569624 TKFCQ3LXA3 575 aa15.31■□□□□ 0.04
CDH11-217ENST00000569624 SLFNL1Q499Z3 407 aa15.31■□□□□ 0.04
CDH11-217ENST00000569624 DUSP28Q4G0W2 176 aa15.31■□□□□ 0.04
CDH11-217ENST00000569624 TMEM63BQ5T3F8 832 aa15.31■□□□□ 0.04
CDH11-217ENST00000569624 RPAP2Q8IXW5 612 aaPredicted RBP15.31■□□□□ 0.04
CDH11-217ENST00000569624 RETREG2Q8NC44 543 aa15.31■□□□□ 0.04
CDH11-217ENST00000569624 GMCL1P1Q8NEA9 526 aa15.31■□□□□ 0.04
CDH11-217ENST00000569624 MKL1Q969V6 931 aa15.31■□□□□ 0.04
CDH11-217ENST00000569624 DDX24Q9GZR7 859 aaKnown RBP eCLIP15.31■□□□□ 0.04
CDH11-217ENST00000569624 CLIP2Q9UDT6 1046 aa15.31■□□□□ 0.04
CDH11-217ENST00000569624 SLC4A4Q9Y6R1 1079 aa15.31■□□□□ 0.04
CDH11-217ENST00000569624 DDX49Q9Y6V7 483 aaKnown RBP15.31■□□□□ 0.04
CDH11-217ENST00000569624 POTEB3A0JP26 581 aa15.3■□□□□ 0.04
CDH11-217ENST00000569624 IL9P15248 144 aa15.3■□□□□ 0.04
CDH11-217ENST00000569624 CPT1AP50416 773 aa15.3■□□□□ 0.04
CDH11-217ENST00000569624 WDR5P61964 334 aaKnown RBP15.3■□□□□ 0.04
CDH11-217ENST00000569624 BFSP2Q13515 415 aa15.3■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms