RNA–Protein interactions for RNA: ENST00000568881.1

NEIL1-220, Transcript of nei like DNA glycosylase 1, humanhuman

TSL 3

Gene NEIL1, Length 587 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEIL1-220ENST00000568881 TTBK2Q6IQ55 1244 aa16.02■□□□□ 0.16
NEIL1-220ENST00000568881 MAMDC4Q6UXC1 1216 aa16.02■□□□□ 0.16
NEIL1-220ENST00000568881 TMTC2Q8N394 836 aa16.02■□□□□ 0.16
NEIL1-220ENST00000568881 TM6SF1Q9BZW5 370 aa16.02■□□□□ 0.16
NEIL1-220ENST00000568881 PLXNA1Q9UIW2 1896 aa16.01■□□□□ 0.15
NEIL1-220ENST00000568881 B4DLN1 442 aa16.01■□□□□ 0.15
NEIL1-220ENST00000568881 DNM1LO00429 736 aa16.01■□□□□ 0.15
NEIL1-220ENST00000568881 AKR1A1P14550 325 aa16.01■□□□□ 0.15
NEIL1-220ENST00000568881 CASTP20810 708 aaKnown RBP16.01■□□□□ 0.15
NEIL1-220ENST00000568881 MRPL12P52815 198 aaKnown RBP16.01■□□□□ 0.15
NEIL1-220ENST00000568881 FGD1P98174 961 aa16.01■□□□□ 0.15
NEIL1-220ENST00000568881 TRAF1Q13077 416 aa16.01■□□□□ 0.15
NEIL1-220ENST00000568881 SEC23AQ15436 765 aa16.01■□□□□ 0.15
NEIL1-220ENST00000568881 NSMFQ6X4W1 530 aa16.01■□□□□ 0.15
NEIL1-220ENST00000568881 TRPV1Q8NER1 839 aa16.01■□□□□ 0.15
NEIL1-220ENST00000568881 C22orf23Q9BZE7 217 aa16.01■□□□□ 0.15
NEIL1-220ENST00000568881 MAF1Q9H063 256 aa16.01■□□□□ 0.15
NEIL1-220ENST00000568881 ABHD16BQ9H3Z7 469 aa16.01■□□□□ 0.15
NEIL1-220ENST00000568881 A1CFQ9NQ94 594 aaKnown RBP16.01■□□□□ 0.15
NEIL1-220ENST00000568881 ADD3Q9UEY8 706 aaKnown RBP16.01■□□□□ 0.15
NEIL1-220ENST00000568881 FAM184BQ9ULE4 1060 aa16.01■□□□□ 0.15
NEIL1-220ENST00000568881 CYP46A1Q9Y6A2 500 aa16.01■□□□□ 0.15
NEIL1-220ENST00000568881 SNAP25P60880 206 aa16■□□□□ 0.15
NEIL1-220ENST00000568881 EXOSC10Q01780 885 aaKnown RBP16■□□□□ 0.15
NEIL1-220ENST00000568881 RUFY3Q7L099 469 aa16■□□□□ 0.15
NEIL1-220ENST00000568881 CATIPQ7Z7H3 387 aa16■□□□□ 0.15
NEIL1-220ENST00000568881 RNF180Q86T96 592 aa16■□□□□ 0.15
NEIL1-220ENST00000568881 IGDCC4Q8TDY8 1250 aa16■□□□□ 0.15
NEIL1-220ENST00000568881 SPC25Q9HBM1 224 aa16■□□□□ 0.15
NEIL1-220ENST00000568881 ZSWIM6Q9HCJ5 1215 aa16■□□□□ 0.15
NEIL1-220ENST00000568881 ZHX1Q9UKY1 873 aaPredicted RBP16■□□□□ 0.15
NEIL1-220ENST00000568881 LOC102724159A0A0B4J2E5 919 aa15.99■□□□□ 0.15
NEIL1-220ENST00000568881 GOLGA8HP0CJ92 632 aa15.99■□□□□ 0.15
NEIL1-220ENST00000568881 RPS6KB1P23443 525 aa15.99■□□□□ 0.15
NEIL1-220ENST00000568881 LIFRP42702 1097 aa15.99■□□□□ 0.15
NEIL1-220ENST00000568881 PWP2Q15269 919 aaKnown RBP15.99■□□□□ 0.15
NEIL1-220ENST00000568881 PRAMEF19Q5SWL8 479 aa15.99■□□□□ 0.15
NEIL1-220ENST00000568881 XPNPEP3Q9NQH7 507 aa15.99■□□□□ 0.15
NEIL1-220ENST00000568881 CDKN2AIPQ9NXV6 580 aaPredicted RBP15.99■□□□□ 0.15
NEIL1-220ENST00000568881 CYP39A1Q9NYL5 469 aa15.99■□□□□ 0.15
NEIL1-220ENST00000568881 PTPDC1A2A3K4 754 aa15.98■□□□□ 0.15
NEIL1-220ENST00000568881 CCDC69A6NI79 296 aa15.98■□□□□ 0.15
NEIL1-220ENST00000568881 SH2B2O14492 632 aaPredicted RBP15.98■□□□□ 0.15
NEIL1-220ENST00000568881 MYCNP04198 464 aaPredicted RBP15.98■□□□□ 0.15
NEIL1-220ENST00000568881 CPA1P15085 419 aa15.98■□□□□ 0.15
NEIL1-220ENST00000568881 ACVR2BQ13705 512 aa15.98■□□□□ 0.15
NEIL1-220ENST00000568881 COL9A3Q14050 684 aaPredicted RBP15.98■□□□□ 0.15
NEIL1-220ENST00000568881 CDC37Q16543 378 aaPredicted RBP15.98■□□□□ 0.15
NEIL1-220ENST00000568881 NFXL1Q6ZNB6 911 aa15.98■□□□□ 0.15
NEIL1-220ENST00000568881 ARMCX2Q7L311 632 aa15.98■□□□□ 0.15
NEIL1-220ENST00000568881 MCF2L2Q86YR7 1114 aa15.98■□□□□ 0.15
NEIL1-220ENST00000568881 ADGRF4Q8IZF3 695 aa15.98■□□□□ 0.15
NEIL1-220ENST00000568881 FAM133AQ8N9E0 248 aa15.98■□□□□ 0.15
NEIL1-220ENST00000568881 IL17RAQ96F46 866 aa15.98■□□□□ 0.15
NEIL1-220ENST00000568881 TCEANC2Q96MN5 208 aa15.98■□□□□ 0.15
NEIL1-220ENST00000568881 LRRC2Q9BYS8 371 aa15.98■□□□□ 0.15
NEIL1-220ENST00000568881 UBA5Q9GZZ9 404 aa15.98■□□□□ 0.15
NEIL1-220ENST00000568881 LY9Q9HBG7 655 aa15.98■□□□□ 0.15
NEIL1-220ENST00000568881 ABCB11O95342 1321 aa15.97■□□□□ 0.15
NEIL1-220ENST00000568881 KLRF2D3W0D1 207 aa15.97■□□□□ 0.15
NEIL1-220ENST00000568881 KIF5BP33176 963 aa15.97■□□□□ 0.15
NEIL1-220ENST00000568881 RBM25P49756 843 aaKnown RBP15.97■□□□□ 0.15
NEIL1-220ENST00000568881 CNTN2Q02246 1040 aa15.97■□□□□ 0.15
NEIL1-220ENST00000568881 MUM1L1Q5H9M0 696 aa15.97■□□□□ 0.15
NEIL1-220ENST00000568881 SYNE3Q6ZMZ3 975 aa15.97■□□□□ 0.15
NEIL1-220ENST00000568881 RNF207Q6ZRF8 634 aa15.97■□□□□ 0.15
NEIL1-220ENST00000568881 CCDC144CPQ8IYA2 1237 aa15.97■□□□□ 0.15
NEIL1-220ENST00000568881 UPF3BQ9BZI7 483 aaKnown RBP15.97■□□□□ 0.15
NEIL1-220ENST00000568881 GPHNQ9NQX3 736 aaPredicted RBP15.97■□□□□ 0.15
NEIL1-220ENST00000568881 MRPL11Q9Y3B7 192 aaKnown RBP15.97■□□□□ 0.15
NEIL1-220ENST00000568881 H0YGN5 161 aa15.96■□□□□ 0.15
NEIL1-220ENST00000568881 ZNF865P0CJ78 1059 aaPredicted RBP15.96■□□□□ 0.15
NEIL1-220ENST00000568881 COL6A1P12109 1028 aa15.96■□□□□ 0.15
NEIL1-220ENST00000568881 BAATQ14032 418 aaPredicted RBP15.96■□□□□ 0.15
NEIL1-220ENST00000568881 USH1GQ495M9 461 aa15.96■□□□□ 0.15
NEIL1-220ENST00000568881 ANO1Q5XXA6 986 aa15.96■□□□□ 0.15
NEIL1-220ENST00000568881 Q6ZUG5 572 aa15.96■□□□□ 0.15
NEIL1-220ENST00000568881 FBXO11Q86XK2 927 aa15.96■□□□□ 0.15
NEIL1-220ENST00000568881 RGS22Q8NE09 1264 aa15.96■□□□□ 0.15
NEIL1-220ENST00000568881 CTCFLQ8NI51 663 aaPredicted RBP15.96■□□□□ 0.15
NEIL1-220ENST00000568881 MAP3K14Q99558 947 aa15.96■□□□□ 0.15
NEIL1-220ENST00000568881 SENP6Q9GZR1 1112 aaPredicted RBP15.96■□□□□ 0.15
NEIL1-220ENST00000568881 SENP2Q9HC62 589 aa15.96■□□□□ 0.15
NEIL1-220ENST00000568881 VAT1LQ9HCJ6 419 aa15.96■□□□□ 0.15
NEIL1-220ENST00000568881 SLC12A7Q9Y666 1083 aa15.96■□□□□ 0.15
NEIL1-220ENST00000568881 FRMPD3Q5JV73 1810 aa15.96■□□□□ 0.14
NEIL1-220ENST00000568881 ALPK3Q96L96 1907 aa15.96■□□□□ 0.14
NEIL1-220ENST00000568881 DUSP11O75319 330 aaKnown RBP15.95■□□□□ 0.14
NEIL1-220ENST00000568881 SNAI1O95863 264 aaPredicted RBP15.95■□□□□ 0.14
NEIL1-220ENST00000568881 CALM1P0DP23 149 aa15.95■□□□□ 0.14
NEIL1-220ENST00000568881 CALM2P0DP24 149 aa15.95■□□□□ 0.14
NEIL1-220ENST00000568881 CALM3P0DP25 149 aa15.95■□□□□ 0.14
NEIL1-220ENST00000568881 GRM4Q14833 912 aa15.95■□□□□ 0.14
NEIL1-220ENST00000568881 HABP4Q5JVS0 413 aaKnown RBP15.95■□□□□ 0.14
NEIL1-220ENST00000568881 GJC2Q5T442 439 aaPredicted RBP15.95■□□□□ 0.14
NEIL1-220ENST00000568881 SGMS1Q86VZ5 419 aa15.95■□□□□ 0.14
NEIL1-220ENST00000568881 ZNF654Q8IZM8 581 aa15.95■□□□□ 0.14
NEIL1-220ENST00000568881 FBXL16Q8N461 479 aa15.95■□□□□ 0.14
NEIL1-220ENST00000568881 DNERQ8NFT8 737 aa15.95■□□□□ 0.14
NEIL1-220ENST00000568881 AMNQ9BXJ7 453 aa15.95■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms