RNA–Protein interactions for RNA: ENST00000568820.5

LYRM1-210, Transcript of LYR motif containing 1, humanhuman

TSL 1 (best)

Gene LYRM1, Length 1,695 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LYRM1-210ENST00000568820 PCDHB6Q9Y5E3 794 aa12.78□□□□□ -0.36
LYRM1-210ENST00000568820 SLX4Q8IY92 1834 aa12.78□□□□□ -0.36
LYRM1-210ENST00000568820 RNF223E7ERA6 249 aa12.77□□□□□ -0.36
LYRM1-210ENST00000568820 hCG_1984214I3L0E3 225 aa12.77□□□□□ -0.36
LYRM1-210ENST00000568820 C21orf2O43822 256 aa12.77□□□□□ -0.36
LYRM1-210ENST00000568820 TTLL1O95922 423 aa12.77□□□□□ -0.36
LYRM1-210ENST00000568820 MSNP26038 577 aaKnown RBP12.77□□□□□ -0.36
LYRM1-210ENST00000568820 MMP16P51512 607 aa12.77□□□□□ -0.36
LYRM1-210ENST00000568820 ASPRV1Q53RT3 343 aa12.77□□□□□ -0.36
LYRM1-210ENST00000568820 KANK3Q6NY19 840 aa12.77□□□□□ -0.36
LYRM1-210ENST00000568820 BLIDQ8IZY5 108 aa12.77□□□□□ -0.36
LYRM1-210ENST00000568820 ZNF713Q8N859 430 aaPredicted RBP12.77□□□□□ -0.36
LYRM1-210ENST00000568820 TNFRSF25Q93038 417 aa12.77□□□□□ -0.36
LYRM1-210ENST00000568820 RRP36Q96EU6 259 aaKnown RBP12.77□□□□□ -0.36
LYRM1-210ENST00000568820 TRIM34Q9BYJ4 488 aa12.77□□□□□ -0.36
LYRM1-210ENST00000568820 PRDM9Q9NQV7 894 aa12.77□□□□□ -0.36
LYRM1-210ENST00000568820 BARHL2Q9NY43 387 aa12.77□□□□□ -0.36
LYRM1-210ENST00000568820 PI4KBQ9UBF8 816 aa12.77□□□□□ -0.36
LYRM1-210ENST00000568820 FBXO2Q9UK22 296 aaPredicted RBP12.77□□□□□ -0.36
LYRM1-210ENST00000568820 PCDHA4Q9UN74 947 aa12.77□□□□□ -0.36
LYRM1-210ENST00000568820 MYH6P13533 1939 aa12.77□□□□□ -0.37
LYRM1-210ENST00000568820 BECN2A8MW95 431 aa12.77□□□□□ -0.37
LYRM1-210ENST00000568820 GOLGA6L6A8MZA4 724 aa12.77□□□□□ -0.37
LYRM1-210ENST00000568820 LILRB3O75022 631 aa12.77□□□□□ -0.37
LYRM1-210ENST00000568820 ATP2B1P20020 1258 aa12.77□□□□□ -0.37
LYRM1-210ENST00000568820 NPY5RQ15761 445 aa12.77□□□□□ -0.37
LYRM1-210ENST00000568820 TTC38Q5R3I4 469 aa12.77□□□□□ -0.37
LYRM1-210ENST00000568820 LUZP1Q86V48 1076 aa12.77□□□□□ -0.37
LYRM1-210ENST00000568820 DAGLBQ8NCG7 672 aa12.77□□□□□ -0.37
LYRM1-210ENST00000568820 SHISA4Q96DD7 197 aa12.77□□□□□ -0.37
LYRM1-210ENST00000568820 CLIC6Q96NY7 704 aa12.77□□□□□ -0.37
LYRM1-210ENST00000568820 KCNQ5Q9NR82 932 aa12.77□□□□□ -0.37
LYRM1-210ENST00000568820 IGKV6D-41A0A0C4DH26 115 aa12.76□□□□□ -0.37
LYRM1-210ENST00000568820 RGS20O76081 388 aa12.76□□□□□ -0.37
LYRM1-210ENST00000568820 DXOO77932 396 aaKnown RBP12.76□□□□□ -0.37
LYRM1-210ENST00000568820 TPM3P06753 285 aa12.76□□□□□ -0.37
LYRM1-210ENST00000568820 GNA11P29992 359 aa12.76□□□□□ -0.37
LYRM1-210ENST00000568820 HEATR3Q7Z4Q2 680 aa12.76□□□□□ -0.37
LYRM1-210ENST00000568820 DEFB132Q7Z7B7 95 aa12.76□□□□□ -0.37
LYRM1-210ENST00000568820 FOXP4Q8IVH2 680 aaPredicted RBP12.76□□□□□ -0.37
LYRM1-210ENST00000568820 CNNM3Q8NE01 707 aa12.76□□□□□ -0.37
LYRM1-210ENST00000568820 PIBF1Q8WXW3 757 aa12.76□□□□□ -0.37
LYRM1-210ENST00000568820 PYM1Q9BRP8 204 aaKnown RBP12.76□□□□□ -0.37
LYRM1-210ENST00000568820 HDAC9Q9UKV0 1011 aa12.76□□□□□ -0.37
LYRM1-210ENST00000568820 MTMR7Q9Y216 660 aa12.76□□□□□ -0.37
LYRM1-210ENST00000568820 CCDC194A0A1B0GVG4 234 aa12.75□□□□□ -0.37
LYRM1-210ENST00000568820 ENTPD3O75355 529 aa12.75□□□□□ -0.37
LYRM1-210ENST00000568820 AKR1B1P15121 316 aa12.75□□□□□ -0.37
LYRM1-210ENST00000568820 SHMT1P34896 483 aa12.75□□□□□ -0.37
LYRM1-210ENST00000568820 KRBA2Q6ZNG9 492 aa12.75□□□□□ -0.37
LYRM1-210ENST00000568820 PIK3AP1Q6ZUJ8 805 aa12.75□□□□□ -0.37
LYRM1-210ENST00000568820 ANKLE1Q8NAG6 615 aa12.75□□□□□ -0.37
LYRM1-210ENST00000568820 BPIFA3Q9BQP9 254 aa12.75□□□□□ -0.37
LYRM1-210ENST00000568820 TMOD2Q9NZR1 351 aa12.75□□□□□ -0.37
LYRM1-210ENST00000568820 STXBP3O00186 592 aa12.74□□□□□ -0.37
LYRM1-210ENST00000568820 CYTH3O43739 400 aa12.74□□□□□ -0.37
LYRM1-210ENST00000568820 PDHBP11177 359 aa12.74□□□□□ -0.37
LYRM1-210ENST00000568820 NLRP12P59046 1061 aa12.74□□□□□ -0.37
LYRM1-210ENST00000568820 TGFB2P61812 414 aa12.74□□□□□ -0.37
LYRM1-210ENST00000568820 TPM4P67936 248 aa12.74□□□□□ -0.37
LYRM1-210ENST00000568820 NFIAQ12857 509 aa12.74□□□□□ -0.37
LYRM1-210ENST00000568820 QPCTQ16769 361 aa12.74□□□□□ -0.37
LYRM1-210ENST00000568820 GPATCH4Q5T3I0 446 aaKnown RBP12.74□□□□□ -0.37
LYRM1-210ENST00000568820 WWC2Q6AWC2 1192 aa12.74□□□□□ -0.37
LYRM1-210ENST00000568820 USP17L2Q6R6M4 530 aa12.74□□□□□ -0.37
LYRM1-210ENST00000568820 ZSCAN29Q8IWY8 852 aaPredicted RBP12.74□□□□□ -0.37
LYRM1-210ENST00000568820 C6orf50Q9HD87 102 aa12.74□□□□□ -0.37
LYRM1-210ENST00000568820 CLIP2Q9UDT6 1046 aa12.74□□□□□ -0.37
LYRM1-210ENST00000568820 MPHOSPH10O00566 681 aaKnown RBP12.73□□□□□ -0.37
LYRM1-210ENST00000568820 GOLGA8HP0CJ92 632 aa12.73□□□□□ -0.37
LYRM1-210ENST00000568820 SNHG28P0DPA3 235 aa12.73□□□□□ -0.37
LYRM1-210ENST00000568820 JUNDP17535 347 aa12.73□□□□□ -0.37
LYRM1-210ENST00000568820 NAPAP54920 295 aa12.73□□□□□ -0.37
LYRM1-210ENST00000568820 ATP2C1P98194 919 aaPredicted RBP12.73□□□□□ -0.37
LYRM1-210ENST00000568820 EARS2Q5JPH6 523 aaKnown RBP12.73□□□□□ -0.37
LYRM1-210ENST00000568820 ARL6IP4Q66PJ3 421 aaKnown RBP12.73□□□□□ -0.37
LYRM1-210ENST00000568820 ARHGAP30Q7Z6I6 1101 aaPredicted RBP12.73□□□□□ -0.37
LYRM1-210ENST00000568820 LARGE2Q8N3Y3 721 aa12.73□□□□□ -0.37
LYRM1-210ENST00000568820 OGFOD1Q8N543 542 aa12.73□□□□□ -0.37
LYRM1-210ENST00000568820 GPKOWQ92917 476 aaPredicted RBP eCLIP12.73□□□□□ -0.37
LYRM1-210ENST00000568820 ZMYND12Q9H0C1 365 aa12.73□□□□□ -0.37
LYRM1-210ENST00000568820 RIOX1Q9H6W3 641 aa12.73□□□□□ -0.37
LYRM1-210ENST00000568820 KANSL2Q9H9L4 492 aa12.73□□□□□ -0.37
LYRM1-210ENST00000568820 TUBE1Q9UJT0 475 aa12.73□□□□□ -0.37
LYRM1-210ENST00000568820 ESYT2A0FGR8 921 aa12.73□□□□□ -0.37
LYRM1-210ENST00000568820 SMTNL1A8MU46 457 aa12.73□□□□□ -0.37
LYRM1-210ENST00000568820 USP17L5A8MUK1 530 aa12.73□□□□□ -0.37
LYRM1-210ENST00000568820 LAD1O00515 517 aa12.73□□□□□ -0.37
LYRM1-210ENST00000568820 DPEP1P16444 411 aa12.73□□□□□ -0.37
LYRM1-210ENST00000568820 POLD1P28340 1107 aa12.73□□□□□ -0.37
LYRM1-210ENST00000568820 TCP10Q12799 353 aa12.73□□□□□ -0.37
LYRM1-210ENST00000568820 IQCB1Q15051 598 aa12.73□□□□□ -0.37
LYRM1-210ENST00000568820 CFAP100Q494V2 611 aa12.73□□□□□ -0.37
LYRM1-210ENST00000568820 CERKLQ49MI3 558 aaPredicted RBP12.73□□□□□ -0.37
LYRM1-210ENST00000568820 C11orf57Q6ZUT1 292 aaPredicted RBP12.73□□□□□ -0.37
LYRM1-210ENST00000568820 KRT25Q7Z3Z0 450 aa12.73□□□□□ -0.37
LYRM1-210ENST00000568820 PROCA1Q8NCQ7 364 aaPredicted RBP12.73□□□□□ -0.37
LYRM1-210ENST00000568820 PRR7Q8TB68 274 aa12.73□□□□□ -0.37
LYRM1-210ENST00000568820 CSRNP2Q9H175 543 aa12.73□□□□□ -0.37
LYRM1-210ENST00000568820 PIM2Q9P1W9 311 aa12.73□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 71.3 ms