RNA–Protein interactions for RNA: ENST00000568290.1

ATXN3-250, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 671 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-250ENST00000568290 STRCP1A6NGW2 1772 aa8.56□□□□□ -1.04
ATXN3-250ENST00000568290 CNTNAP5Q8WYK1 1306 aa8.55□□□□□ -1.04
ATXN3-250ENST00000568290 ITGB4P16144 1822 aa8.55□□□□□ -1.04
ATXN3-250ENST00000568290 PVALEFA0A1B0GWK0 134 aa8.55□□□□□ -1.04
ATXN3-250ENST00000568290 LGALS16A8MUM7 142 aa8.55□□□□□ -1.04
ATXN3-250ENST00000568290 C3orf80F5H4A9 247 aa8.55□□□□□ -1.04
ATXN3-250ENST00000568290 TK2O00142 265 aa8.55□□□□□ -1.04
ATXN3-250ENST00000568290 TACC1O75410 805 aa8.55□□□□□ -1.04
ATXN3-250ENST00000568290 RHOBTB3O94955 611 aa8.55□□□□□ -1.04
ATXN3-250ENST00000568290 LDHBP07195 334 aaKnown RBP8.55□□□□□ -1.04
ATXN3-250ENST00000568290 TSPY3P0CV98 308 aa8.55□□□□□ -1.04
ATXN3-250ENST00000568290 TSPY8P0CW00 308 aa8.55□□□□□ -1.04
ATXN3-250ENST00000568290 CASP14P31944 242 aa8.55□□□□□ -1.04
ATXN3-250ENST00000568290 GUCY1A2P33402 732 aa8.55□□□□□ -1.04
ATXN3-250ENST00000568290 KRT9P35527 623 aa8.55□□□□□ -1.04
ATXN3-250ENST00000568290 LSM11P83369 360 aaKnown RBP eCLIP8.55□□□□□ -1.04
ATXN3-250ENST00000568290 FMR1Q06787 632 aaKnown RBP eCLIP8.55□□□□□ -1.04
ATXN3-250ENST00000568290 FUT2Q10981 343 aa8.55□□□□□ -1.04
ATXN3-250ENST00000568290 TRAF1Q13077 416 aa8.55□□□□□ -1.04
ATXN3-250ENST00000568290 GRM4Q14833 912 aa8.55□□□□□ -1.04
ATXN3-250ENST00000568290 NONOQ15233 471 aaKnown RBP eCLIP8.55□□□□□ -1.04
ATXN3-250ENST00000568290 KRT31Q15323 416 aa8.55□□□□□ -1.04
ATXN3-250ENST00000568290 PPP1R18Q6NYC8 613 aa8.55□□□□□ -1.04
ATXN3-250ENST00000568290 WDR93Q6P2C0 686 aa8.55□□□□□ -1.04
ATXN3-250ENST00000568290 PIK3AP1Q6ZUJ8 805 aa8.55□□□□□ -1.04
ATXN3-250ENST00000568290 TMC4Q7Z404 712 aa8.55□□□□□ -1.04
ATXN3-250ENST00000568290 KIAA1328Q86T90 577 aa8.55□□□□□ -1.04
ATXN3-250ENST00000568290 FNBP4Q8N3X1 1017 aaPredicted RBP8.55□□□□□ -1.04
ATXN3-250ENST00000568290 KCTD17Q8N5Z5 321 aa8.55□□□□□ -1.04
ATXN3-250ENST00000568290 MSANTD4Q8NCY6 345 aa8.55□□□□□ -1.04
ATXN3-250ENST00000568290 PNMA1Q8ND90 353 aa8.55□□□□□ -1.04
ATXN3-250ENST00000568290 TRIM58Q8NG06 486 aa8.55□□□□□ -1.04
ATXN3-250ENST00000568290 TBC1D22AQ8WUA7 517 aa8.55□□□□□ -1.04
ATXN3-250ENST00000568290 TNFRSF25Q93038 417 aa8.55□□□□□ -1.04
ATXN3-250ENST00000568290 NSUN4Q96CB9 384 aaKnown RBP8.55□□□□□ -1.04
ATXN3-250ENST00000568290 RRP36Q96EU6 259 aaKnown RBP8.55□□□□□ -1.04
ATXN3-250ENST00000568290 CDK5RAP3Q96JB5 506 aa8.55□□□□□ -1.04
ATXN3-250ENST00000568290 TRIM47Q96LD4 638 aa8.55□□□□□ -1.04
ATXN3-250ENST00000568290 SPZ1Q9BXG8 430 aa8.55□□□□□ -1.04
ATXN3-250ENST00000568290 DCP1AQ9NPI6 582 aaPredicted RBP8.55□□□□□ -1.04
ATXN3-250ENST00000568290 SEC31BQ9NQW1 1179 aa8.55□□□□□ -1.04
ATXN3-250ENST00000568290 SAMSN1Q9NSI8 373 aaKnown RBP8.55□□□□□ -1.04
ATXN3-250ENST00000568290 MKRN1Q9UHC7 482 aaKnown RBP8.55□□□□□ -1.04
ATXN3-250ENST00000568290 RAB21Q9UL25 225 aa8.55□□□□□ -1.04
ATXN3-250ENST00000568290 MYO6Q9UM54 1294 aa8.55□□□□□ -1.04
ATXN3-250ENST00000568290 CAPN11Q9UMQ6 739 aa8.55□□□□□ -1.04
ATXN3-250ENST00000568290 MINPP1Q9UNW1 487 aa8.55□□□□□ -1.04
ATXN3-250ENST00000568290 CTNND2Q9UQB3 1225 aa8.55□□□□□ -1.04
ATXN3-250ENST00000568290 FHOD1Q9Y613 1164 aa8.55□□□□□ -1.04
ATXN3-250ENST00000568290 EPN1Q9Y6I3 576 aaPredicted RBP8.55□□□□□ -1.04
ATXN3-250ENST00000568290 ZNF831Q5JPB2 1677 aa8.55□□□□□ -1.04
ATXN3-250ENST00000568290 SPATA31A1Q5TZJ5 1347 aa8.54□□□□□ -1.04
ATXN3-250ENST00000568290 BCORQ6W2J9 1755 aa8.54□□□□□ -1.04
ATXN3-250ENST00000568290 ROBO3Q96MS0 1386 aa8.54□□□□□ -1.04
ATXN3-250ENST00000568290 ESYT2A0FGR8 921 aa8.54□□□□□ -1.04
ATXN3-250ENST00000568290 TMEM232C9JQI7 657 aa8.54□□□□□ -1.04
ATXN3-250ENST00000568290 BHMG1C9JSJ3 638 aaPredicted RBP8.54□□□□□ -1.04
ATXN3-250ENST00000568290 PSMD14O00487 310 aa8.54□□□□□ -1.04
ATXN3-250ENST00000568290 PES1O00541 588 aaKnown RBP8.54□□□□□ -1.04
ATXN3-250ENST00000568290 GNA14O95837 355 aa8.54□□□□□ -1.04
ATXN3-250ENST00000568290 TRIM21P19474 475 aaKnown RBP8.54□□□□□ -1.04
ATXN3-250ENST00000568290 BMP6P22004 513 aa8.54□□□□□ -1.04
ATXN3-250ENST00000568290 CCNE1P24864 410 aa8.54□□□□□ -1.04
ATXN3-250ENST00000568290 CYP2C19P33261 490 aa8.54□□□□□ -1.04
ATXN3-250ENST00000568290 MCM7P33993 719 aa8.54□□□□□ -1.04
ATXN3-250ENST00000568290 PPP4CP60510 307 aa8.54□□□□□ -1.04
ATXN3-250ENST00000568290 ZBED6P86452 979 aa8.54□□□□□ -1.04
ATXN3-250ENST00000568290 ITIH3Q06033 890 aa8.54□□□□□ -1.04
ATXN3-250ENST00000568290 KIF5AQ12840 1032 aa8.54□□□□□ -1.04
ATXN3-250ENST00000568290 PROX2Q3B8N5 592 aa8.54□□□□□ -1.04
ATXN3-250ENST00000568290 SPECC1Q5M775 1068 aa8.54□□□□□ -1.04
ATXN3-250ENST00000568290 PADI6Q6TGC4 694 aa8.54□□□□□ -1.04
ATXN3-250ENST00000568290 C15orf52Q6ZUT6 534 aaKnown RBP8.54□□□□□ -1.04
ATXN3-250ENST00000568290 NBPF5PQ86XG9 351 aaPredicted RBP8.54□□□□□ -1.04
ATXN3-250ENST00000568290 CDAN1Q8IWY9 1227 aa8.54□□□□□ -1.04
ATXN3-250ENST00000568290 ADSSL1Q8N142 457 aa8.54□□□□□ -1.04
ATXN3-250ENST00000568290 FAM71BQ8TC56 605 aa8.54□□□□□ -1.04
ATXN3-250ENST00000568290 SDR42E1Q8WUS8 393 aa8.54□□□□□ -1.04
ATXN3-250ENST00000568290 KIFC2Q96AC6 838 aa8.54□□□□□ -1.04
ATXN3-250ENST00000568290 EPSTI1Q96J88 318 aa8.54□□□□□ -1.04
ATXN3-250ENST00000568290 FAM84BQ96KN1 310 aaPredicted RBP8.54□□□□□ -1.04
ATXN3-250ENST00000568290 PARD6BQ9BYG5 372 aa8.54□□□□□ -1.04
ATXN3-250ENST00000568290 SENP2Q9HC62 589 aa8.54□□□□□ -1.04
ATXN3-250ENST00000568290 RIC8AQ9NPQ8 531 aa8.54□□□□□ -1.04
ATXN3-250ENST00000568290 MCM9Q9NXL9 1143 aa8.54□□□□□ -1.04
ATXN3-250ENST00000568290 BARHL2Q9NY43 387 aa8.54□□□□□ -1.04
ATXN3-250ENST00000568290 NOL12Q9UGY1 213 aaKnown RBP eCLIP8.54□□□□□ -1.04
ATXN3-250ENST00000568290 VPS9D1Q9Y2B5 631 aa8.54□□□□□ -1.04
ATXN3-250ENST00000568290 RREB1Q92766 1687 aa8.53□□□□□ -1.04
ATXN3-250ENST00000568290 A0A087WWV3 80 aa8.53□□□□□ -1.04
ATXN3-250ENST00000568290 A0A0G2JS52 829 aa8.53□□□□□ -1.04
ATXN3-250ENST00000568290 EIF3CLB5ME19 914 aaKnown RBP8.53□□□□□ -1.04
ATXN3-250ENST00000568290 HRO43593 1189 aa8.53□□□□□ -1.04
ATXN3-250ENST00000568290 NDUFA10O95299 355 aa8.53□□□□□ -1.04
ATXN3-250ENST00000568290 PARP1P09874 1014 aaKnown RBP8.53□□□□□ -1.04
ATXN3-250ENST00000568290 OR52Z1P0C646 297 aa8.53□□□□□ -1.04
ATXN3-250ENST00000568290 GCFC2P16383 781 aaKnown RBP8.53□□□□□ -1.04
ATXN3-250ENST00000568290 PRLRP16471 622 aa8.53□□□□□ -1.04
ATXN3-250ENST00000568290 PAFAH1B1P43034 410 aa8.53□□□□□ -1.04
ATXN3-250ENST00000568290 MECOMQ03112 1051 aa8.53□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms