RNA–Protein interactions for RNA: ENST00000568238.1

TSC2-220, Transcript of TSC complex subunit 2, humanhuman

TSL 3

Gene TSC2, Length 422 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSC2-220ENST00000568238 ADCY6O43306 1168 aa15.12■□□□□ 0.01
TSC2-220ENST00000568238 CDC45O75419 566 aa15.12■□□□□ 0.01
TSC2-220ENST00000568238 MUM1L1Q5H9M0 696 aa15.12■□□□□ 0.01
TSC2-220ENST00000568238 NSMFQ6X4W1 530 aa15.12■□□□□ 0.01
TSC2-220ENST00000568238 KLHDC9Q8NEP7 349 aa15.12■□□□□ 0.01
TSC2-220ENST00000568238 NUP133Q8WUM0 1156 aa15.12■□□□□ 0.01
TSC2-220ENST00000568238 RUFY2Q8WXA3 655 aa15.12■□□□□ 0.01
TSC2-220ENST00000568238 DSCC1Q9BVC3 393 aa15.12■□□□□ 0.01
TSC2-220ENST00000568238 KATNBL1Q9H079 304 aa15.12■□□□□ 0.01
TSC2-220ENST00000568238 SPC25Q9HBM1 224 aa15.12■□□□□ 0.01
TSC2-220ENST00000568238 CYP39A1Q9NYL5 469 aa15.12■□□□□ 0.01
TSC2-220ENST00000568238 RAD50Q92878 1312 aa15.12■□□□□ 0.01
TSC2-220ENST00000568238 SOWAHBA6NEL2 793 aa15.11■□□□□ 0.01
TSC2-220ENST00000568238 MOXD2PA6NHM9 499 aa15.11■□□□□ 0.01
TSC2-220ENST00000568238 ASB14A6NK59 587 aa15.11■□□□□ 0.01
TSC2-220ENST00000568238 PQBP1O60828 265 aaKnown RBP15.11■□□□□ 0.01
TSC2-220ENST00000568238 C6orf222P0C671 652 aaPredicted RBP15.11■□□□□ 0.01
TSC2-220ENST00000568238 CST5P28325 142 aaPredicted RBP15.11■□□□□ 0.01
TSC2-220ENST00000568238 ACLYP53396 1101 aa15.11■□□□□ 0.01
TSC2-220ENST00000568238 TLE2Q04725 743 aa15.11■□□□□ 0.01
TSC2-220ENST00000568238 ZNF543Q08ER8 600 aa15.11■□□□□ 0.01
TSC2-220ENST00000568238 IMMTQ16891 758 aaKnown RBP15.11■□□□□ 0.01
TSC2-220ENST00000568238 GPR153Q6NV75 609 aa15.11■□□□□ 0.01
TSC2-220ENST00000568238 IQCA1Q86XH1 822 aa15.11■□□□□ 0.01
TSC2-220ENST00000568238 ZKSCAN3Q9BRR0 538 aa15.11■□□□□ 0.01
TSC2-220ENST00000568238 UPF3AQ9H1J1 476 aaKnown RBP15.11■□□□□ 0.01
TSC2-220ENST00000568238 STARD7Q9NQZ5 370 aa15.11■□□□□ 0.01
TSC2-220ENST00000568238 ASTN1O14525 1302 aa15.11■□□□□ 0.01
TSC2-220ENST00000568238 A0A0C4DFX4 3053 aa15.1■□□□□ 0.01
TSC2-220ENST00000568238 MYADML2A6NDP7 307 aa15.1■□□□□ 0.01
TSC2-220ENST00000568238 KDM4AO75164 1064 aa15.1■□□□□ 0.01
TSC2-220ENST00000568238 CLTBP09497 229 aa15.1■□□□□ 0.01
TSC2-220ENST00000568238 SNHG28P0DPA3 235 aa15.1■□□□□ 0.01
TSC2-220ENST00000568238 GJA9P57773 515 aa15.1■□□□□ 0.01
TSC2-220ENST00000568238 KCNA10Q16322 511 aa15.1■□□□□ 0.01
TSC2-220ENST00000568238 CCDC178Q5BJE1 867 aa15.1■□□□□ 0.01
TSC2-220ENST00000568238 CASC1Q6TDU7 716 aa15.1■□□□□ 0.01
TSC2-220ENST00000568238 DGKHQ86XP1 1220 aa15.1■□□□□ 0.01
TSC2-220ENST00000568238 PCSK9Q8NBP7 692 aaKnown RBP15.1■□□□□ 0.01
TSC2-220ENST00000568238 CTNNA3Q9UI47 895 aa15.1■□□□□ 0.01
TSC2-220ENST00000568238 PNMA2Q9UL42 364 aa15.1■□□□□ 0.01
TSC2-220ENST00000568238 CDH23Q9H251 3354 aa15.1■□□□□ 0.01
TSC2-220ENST00000568238 TRIM43BA6NCK2 446 aa15.09■□□□□ 0.01
TSC2-220ENST00000568238 B4E1Z4 1266 aa15.09■□□□□ 0.01
TSC2-220ENST00000568238 NFIBO00712 420 aa15.09■□□□□ 0.01
TSC2-220ENST00000568238 SGSM2O43147 1006 aa15.09■□□□□ 0.01
TSC2-220ENST00000568238 GPATCH4Q5T3I0 446 aaKnown RBP15.09■□□□□ 0.01
TSC2-220ENST00000568238 CCSAPQ6IQ19 270 aaPredicted RBP15.09■□□□□ 0.01
TSC2-220ENST00000568238 NOL8Q76FK4 1167 aaKnown RBP15.09■□□□□ 0.01
TSC2-220ENST00000568238 SH3RF1Q7Z6J0 888 aa15.09■□□□□ 0.01
TSC2-220ENST00000568238 TRIM43Q96BQ3 446 aaPredicted RBP15.09■□□□□ 0.01
TSC2-220ENST00000568238 GLT1D1Q96MS3 346 aa15.09■□□□□ 0.01
TSC2-220ENST00000568238 ESYT1Q9BSJ8 1104 aa15.09■□□□□ 0.01
TSC2-220ENST00000568238 TNFAIP2Q03169 654 aa15.08■□□□□ 0
TSC2-220ENST00000568238 GNASQ5JWF2 1037 aa15.08■□□□□ 0
TSC2-220ENST00000568238 ANKRD33Q7Z3H0 272 aa15.08■□□□□ 0
TSC2-220ENST00000568238 TLK2Q86UE8 772 aa15.08■□□□□ 0
TSC2-220ENST00000568238 FBXO16Q8IX29 292 aaPredicted RBP15.08■□□□□ 0
TSC2-220ENST00000568238 PNMA1Q8ND90 353 aa15.08■□□□□ 0
TSC2-220ENST00000568238 BADQ92934 168 aa15.08■□□□□ 0
TSC2-220ENST00000568238 KAT14Q9H8E8 782 aa15.08■□□□□ 0
TSC2-220ENST00000568238 CNNM2Q9H8M5 875 aa15.08■□□□□ 0
TSC2-220ENST00000568238 EYSQ5T1H1 3165 aa15.08■□□□□ 0
TSC2-220ENST00000568238 ELP1O95163 1332 aa15.08■□□□□ 0
TSC2-220ENST00000568238 MROH7Q68CQ1 1323 aa15.08■□□□□ 0
TSC2-220ENST00000568238 WDR19Q8NEZ3 1342 aa15.08■□□□□ 0
TSC2-220ENST00000568238 UNC80Q8N2C7 3258 aa15.07■□□□□ 0
TSC2-220ENST00000568238 C11orf97A0A1B0GVM6 126 aaPredicted RBP15.07■□□□□ 0
TSC2-220ENST00000568238 PTPDC1A2A3K4 754 aa15.07■□□□□ 0
TSC2-220ENST00000568238 DCDC2CA8MYV0 355 aa15.07■□□□□ 0
TSC2-220ENST00000568238 KIAA0355O15063 1070 aa15.07■□□□□ 0
TSC2-220ENST00000568238 ASGR1P07306 291 aa15.07■□□□□ 0
TSC2-220ENST00000568238 GOLGA8HP0CJ92 632 aa15.07■□□□□ 0
TSC2-220ENST00000568238 IRX5P78411 483 aaPredicted RBP15.07■□□□□ 0
TSC2-220ENST00000568238 BAATQ14032 418 aaPredicted RBP15.07■□□□□ 0
TSC2-220ENST00000568238 SLC30A10Q6XR72 485 aa15.07■□□□□ 0
TSC2-220ENST00000568238 ENAHQ8N8S7 591 aaPredicted RBP15.07■□□□□ 0
TSC2-220ENST00000568238 TOX2Q96NM4 488 aa15.07■□□□□ 0
TSC2-220ENST00000568238 PURBQ96QR8 312 aaKnown RBP15.07■□□□□ 0
TSC2-220ENST00000568238 ZSCAN10Q96SZ4 725 aaPredicted RBP15.07■□□□□ 0
TSC2-220ENST00000568238 UBAC1Q9BSL1 405 aa15.07■□□□□ 0
TSC2-220ENST00000568238 KRT23Q9C075 422 aa15.07■□□□□ 0
TSC2-220ENST00000568238 VTA1Q9NP79 307 aa15.07■□□□□ 0
TSC2-220ENST00000568238 ADD3Q9UEY8 706 aaKnown RBP15.07■□□□□ 0
TSC2-220ENST00000568238 DDX49Q9Y6V7 483 aaKnown RBP15.07■□□□□ 0
TSC2-220ENST00000568238 TNKSO95271 1327 aa15.07■□□□□ 0
TSC2-220ENST00000568238 LOC102724159A0A0B4J2E5 919 aa15.06■□□□□ 0
TSC2-220ENST00000568238 ALDH5A1P51649 535 aaPredicted RBP15.06■□□□□ 0
TSC2-220ENST00000568238 NKX3-2P78367 333 aa15.06■□□□□ 0
TSC2-220ENST00000568238 PTH1RQ03431 593 aa15.06■□□□□ 0
TSC2-220ENST00000568238 PWP2Q15269 919 aaKnown RBP15.06■□□□□ 0
TSC2-220ENST00000568238 ASPRV1Q53RT3 343 aa15.06■□□□□ 0
TSC2-220ENST00000568238 EEPD1Q7L9B9 569 aa15.06■□□□□ 0
TSC2-220ENST00000568238 DEFB123Q8N688 67 aa15.06■□□□□ 0
TSC2-220ENST00000568238 MORC4Q8TE76 937 aa15.06■□□□□ 0
TSC2-220ENST00000568238 CLEC4DQ8WXI8 215 aa15.06■□□□□ 0
TSC2-220ENST00000568238 ANKS1AQ92625 1134 aa15.06■□□□□ 0
TSC2-220ENST00000568238 VTI1AQ96AJ9 217 aa15.06■□□□□ 0
TSC2-220ENST00000568238 TMEM39AQ9NV64 488 aa15.06■□□□□ 0
TSC2-220ENST00000568238 GNEQ9Y223 722 aaKnown RBP15.06■□□□□ 0
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms