RNA–Protein interactions for RNA: ENST00000567674.1

CDH3-206, Transcript of cadherin 3, humanhuman

TSL 3

Gene CDH3, Length 892 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH3-206ENST00000567674 GJA9P57773 515 aa13.1□□□□□ -0.31
CDH3-206ENST00000567674 SART3Q15020 963 aaKnown RBP13.1□□□□□ -0.31
CDH3-206ENST00000567674 CCDC96Q2M329 555 aa13.1□□□□□ -0.31
CDH3-206ENST00000567674 FAM109BQ6ICB4 259 aaPredicted RBP13.1□□□□□ -0.31
CDH3-206ENST00000567674 KLHDC9Q8NEP7 349 aa13.1□□□□□ -0.31
CDH3-206ENST00000567674 AGBL1Q96MI9 1066 aa13.1□□□□□ -0.31
CDH3-206ENST00000567674 UPF3AQ9H1J1 476 aaKnown RBP13.1□□□□□ -0.31
CDH3-206ENST00000567674 VTA1Q9NP79 307 aa13.1□□□□□ -0.31
CDH3-206ENST00000567674 PRKAG2Q9UGJ0 569 aa13.1□□□□□ -0.31
CDH3-206ENST00000567674 NEDD4P46934 1319 aa13.1□□□□□ -0.31
CDH3-206ENST00000567674 MROH7Q68CQ1 1323 aa13.1□□□□□ -0.31
CDH3-206ENST00000567674 LAMA4Q16363 1823 aa13.09□□□□□ -0.31
CDH3-206ENST00000567674 ADAMTS4O75173 837 aa13.09□□□□□ -0.31
CDH3-206ENST00000567674 CABYRO75952 493 aa13.09□□□□□ -0.31
CDH3-206ENST00000567674 ALAS1P13196 640 aa13.09□□□□□ -0.31
CDH3-206ENST00000567674 LRRC26Q2I0M4 334 aa13.09□□□□□ -0.31
CDH3-206ENST00000567674 CCSAPQ6IQ19 270 aaPredicted RBP13.09□□□□□ -0.31
CDH3-206ENST00000567674 ARMCX2Q7L311 632 aa13.09□□□□□ -0.31
CDH3-206ENST00000567674 ANKRD33Q7Z3H0 272 aa13.09□□□□□ -0.31
CDH3-206ENST00000567674 MCF2L2Q86YR7 1114 aa13.09□□□□□ -0.31
CDH3-206ENST00000567674 C7orf61Q8IZ16 206 aa13.09□□□□□ -0.31
CDH3-206ENST00000567674 TMTC2Q8N394 836 aa13.09□□□□□ -0.31
CDH3-206ENST00000567674 ENAHQ8N8S7 591 aaPredicted RBP13.09□□□□□ -0.31
CDH3-206ENST00000567674 NCOA7Q8NI08 942 aa13.09□□□□□ -0.31
CDH3-206ENST00000567674 FGD4Q96M96 766 aa13.09□□□□□ -0.31
CDH3-206ENST00000567674 PLXNA1Q9UIW2 1896 aa13.09□□□□□ -0.31
CDH3-206ENST00000567674 ISY1Q9ULR0 285 aaKnown RBP13.09□□□□□ -0.31
CDH3-206ENST00000567674 TNKSO95271 1327 aa13.09□□□□□ -0.31
CDH3-206ENST00000567674 ERICH2A1L162 156 aa13.08□□□□□ -0.32
CDH3-206ENST00000567674 B4E1Z4 1266 aa13.08□□□□□ -0.32
CDH3-206ENST00000567674 SMARCA1P28370 1054 aa13.08□□□□□ -0.32
CDH3-206ENST00000567674 MAGEA10P43363 369 aaPredicted RBP13.08□□□□□ -0.32
CDH3-206ENST00000567674 GHRHRQ02643 423 aa13.08□□□□□ -0.32
CDH3-206ENST00000567674 BMP2KLQ5H9B9 411 aa13.08□□□□□ -0.32
CDH3-206ENST00000567674 PRAMEF19Q5SWL8 479 aa13.08□□□□□ -0.32
CDH3-206ENST00000567674 GJC2Q5T442 439 aaPredicted RBP13.08□□□□□ -0.32
CDH3-206ENST00000567674 IFIT1BQ5T764 474 aaKnown RBP13.08□□□□□ -0.32
CDH3-206ENST00000567674 KIAA1211Q6ZU35 1233 aa13.08□□□□□ -0.32
CDH3-206ENST00000567674 CCDC144CPQ8IYA2 1237 aa13.08□□□□□ -0.32
CDH3-206ENST00000567674 SYMPKQ92797 1274 aaKnown RBP13.08□□□□□ -0.32
CDH3-206ENST00000567674 GUCD1Q96NT3 240 aa13.08□□□□□ -0.32
CDH3-206ENST00000567674 UBE2OQ9C0C9 1292 aaKnown RBP13.08□□□□□ -0.32
CDH3-206ENST00000567674 KATNBL1Q9H079 304 aa13.08□□□□□ -0.32
CDH3-206ENST00000567674 ZMYND8Q9ULU4 1186 aaPredicted RBP13.08□□□□□ -0.32
CDH3-206ENST00000567674 FRMPD3Q5JV73 1810 aa13.08□□□□□ -0.32
CDH3-206ENST00000567674 ABCB11O95342 1321 aa13.08□□□□□ -0.32
CDH3-206ENST00000567674 RBM47A0AV96 593 aaKnown RBP13.07□□□□□ -0.32
CDH3-206ENST00000567674 NKRFO15226 690 aaKnown RBP eCLIP13.07□□□□□ -0.32
CDH3-206ENST00000567674 ZEB2O60315 1214 aa13.07□□□□□ -0.32
CDH3-206ENST00000567674 CYP21A2P08686 494 aa13.07□□□□□ -0.32
CDH3-206ENST00000567674 PARP1P09874 1014 aaKnown RBP13.07□□□□□ -0.32
CDH3-206ENST00000567674 SEC23AQ15436 765 aa13.07□□□□□ -0.32
CDH3-206ENST00000567674 CCDC144BQ3MJ40 725 aa13.07□□□□□ -0.32
CDH3-206ENST00000567674 TEX2Q8IWB9 1127 aa13.07□□□□□ -0.32
CDH3-206ENST00000567674 GLT1D1Q96MS3 346 aa13.07□□□□□ -0.32
CDH3-206ENST00000567674 IWS1Q96ST2 819 aa13.07□□□□□ -0.32
CDH3-206ENST00000567674 LBHD1Q9BQE6 289 aaPredicted RBP13.07□□□□□ -0.32
CDH3-206ENST00000567674 SOWAHBA6NEL2 793 aa13.06□□□□□ -0.32
CDH3-206ENST00000567674 EDNRBP24530 442 aa13.06□□□□□ -0.32
CDH3-206ENST00000567674 ADCYAP1R1P41586 468 aa13.06□□□□□ -0.32
CDH3-206ENST00000567674 ACLYP53396 1101 aa13.06□□□□□ -0.32
CDH3-206ENST00000567674 RTP1P59025 263 aa13.06□□□□□ -0.32
CDH3-206ENST00000567674 MUM1L1Q5H9M0 696 aa13.06□□□□□ -0.32
CDH3-206ENST00000567674 TTBK2Q6IQ55 1244 aa13.06□□□□□ -0.32
CDH3-206ENST00000567674 CCDC174Q6PII3 467 aa13.06□□□□□ -0.32
CDH3-206ENST00000567674 CASC1Q6TDU7 716 aa13.06□□□□□ -0.32
CDH3-206ENST00000567674 RNF207Q6ZRF8 634 aa13.06□□□□□ -0.32
CDH3-206ENST00000567674 RALYLQ86SE5 291 aaKnown RBP13.06□□□□□ -0.32
CDH3-206ENST00000567674 CLEC4DQ8WXI8 215 aa13.06□□□□□ -0.32
CDH3-206ENST00000567674 MTMR8Q96EF0 704 aa13.06□□□□□ -0.32
CDH3-206ENST00000567674 GPCPD1Q9NPB8 672 aa13.06□□□□□ -0.32
CDH3-206ENST00000567674 HOMER2Q9NSB8 354 aa13.06□□□□□ -0.32
CDH3-206ENST00000567674 GNEQ9Y223 722 aaKnown RBP13.06□□□□□ -0.32
CDH3-206ENST00000567674 MRPL11Q9Y3B7 192 aaKnown RBP13.06□□□□□ -0.32
CDH3-206ENST00000567674 EYSQ5T1H1 3165 aa13.05□□□□□ -0.32
CDH3-206ENST00000567674 A0A1W2PQ45 241 aaPredicted RBP13.05□□□□□ -0.32
CDH3-206ENST00000567674 A0A1W2PQY0 241 aa13.05□□□□□ -0.32
CDH3-206ENST00000567674 PALM3A6NDB9 673 aaPredicted RBP13.05□□□□□ -0.32
CDH3-206ENST00000567674 KPNA6O60684 536 aa13.05□□□□□ -0.32
CDH3-206ENST00000567674 TAL1P17542 331 aaPredicted RBP13.05□□□□□ -0.32
CDH3-206ENST00000567674 SLC16A2P36021 539 aa13.05□□□□□ -0.32
CDH3-206ENST00000567674 SLC4A3P48751 1232 aa13.05□□□□□ -0.32
CDH3-206ENST00000567674 CNTN2Q02246 1040 aa13.05□□□□□ -0.32
CDH3-206ENST00000567674 TNFAIP2Q03169 654 aa13.05□□□□□ -0.32
CDH3-206ENST00000567674 BAATQ14032 418 aaPredicted RBP13.05□□□□□ -0.32
CDH3-206ENST00000567674 RNF20Q5VTR2 975 aa13.05□□□□□ -0.32
CDH3-206ENST00000567674 ADGRF4Q8IZF3 695 aa13.05□□□□□ -0.32
CDH3-206ENST00000567674 TMEM87BQ96K49 555 aa13.05□□□□□ -0.32
CDH3-206ENST00000567674 ZHX1Q9UKY1 873 aaPredicted RBP13.05□□□□□ -0.32
CDH3-206ENST00000567674 SYNRGQ9UMZ2 1314 aa13.05□□□□□ -0.32
CDH3-206ENST00000567674 DCDC2CA8MYV0 355 aa13.04□□□□□ -0.32
CDH3-206ENST00000567674 E7EWF7 191 aa13.04□□□□□ -0.32
CDH3-206ENST00000567674 EPB41L2O43491 1005 aaKnown RBP13.04□□□□□ -0.32
CDH3-206ENST00000567674 PGK1P00558 417 aa13.04□□□□□ -0.32
CDH3-206ENST00000567674 SYN1P17600 705 aa13.04□□□□□ -0.32
CDH3-206ENST00000567674 PLA2G5P39877 138 aa13.04□□□□□ -0.32
CDH3-206ENST00000567674 CDK7P50613 346 aa13.04□□□□□ -0.32
CDH3-206ENST00000567674 ALDH5A1P51649 535 aaPredicted RBP13.04□□□□□ -0.32
CDH3-206ENST00000567674 KCNA10Q16322 511 aa13.04□□□□□ -0.32
CDH3-206ENST00000567674 DUSP28Q4G0W2 176 aa13.04□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 67.5 ms