RNA–Protein interactions for RNA: ENST00000567399.5

COMMD4-219, Transcript of COMM domain containing 4, humanhuman

TSL 5

Gene COMMD4, Length 976 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-219ENST00000567399 ANKRD1Q15327 319 aa17.57■□□□□ 0.4
COMMD4-219ENST00000567399 MUM1L1Q5H9M0 696 aa17.57■□□□□ 0.4
COMMD4-219ENST00000567399 MFSD14CQ5VZR4 134 aa17.57■□□□□ 0.4
COMMD4-219ENST00000567399 FBXL16Q8N461 479 aa17.57■□□□□ 0.4
COMMD4-219ENST00000567399 NPLOC4Q8TAT6 608 aa17.57■□□□□ 0.4
COMMD4-219ENST00000567399 USP6NLQ92738 828 aa17.57■□□□□ 0.4
COMMD4-219ENST00000567399 LARP6Q9BRS8 491 aaKnown RBP17.57■□□□□ 0.4
COMMD4-219ENST00000567399 TMEM106CQ9BVX2 250 aa17.57■□□□□ 0.4
COMMD4-219ENST00000567399 MRPL11Q9Y3B7 192 aaKnown RBP17.57■□□□□ 0.4
COMMD4-219ENST00000567399 PFASO15067 1338 aa17.56■□□□□ 0.4
COMMD4-219ENST00000567399 PNMA6FA0A0J9YX94 578 aa17.56■□□□□ 0.4
COMMD4-219ENST00000567399 INHAP05111 366 aa17.56■□□□□ 0.4
COMMD4-219ENST00000567399 NEK4P51957 841 aa17.56■□□□□ 0.4
COMMD4-219ENST00000567399 RCAN1P53805 252 aa17.56■□□□□ 0.4
COMMD4-219ENST00000567399 CCL14Q16627 93 aa17.56■□□□□ 0.4
COMMD4-219ENST00000567399 SRBD1Q8N5C6 995 aaKnown RBP17.56■□□□□ 0.4
COMMD4-219ENST00000567399 SPZ1Q9BXG8 430 aa17.56■□□□□ 0.4
COMMD4-219ENST00000567399 PCDHA1Q9Y5I3 950 aa17.56■□□□□ 0.4
COMMD4-219ENST00000567399 CYTH3O43739 400 aa17.55■□□□□ 0.4
COMMD4-219ENST00000567399 CAPN15O75808 1086 aa17.55■□□□□ 0.4
COMMD4-219ENST00000567399 HOXC6P09630 235 aa17.55■□□□□ 0.4
COMMD4-219ENST00000567399 CALML3P27482 149 aa17.55■□□□□ 0.4
COMMD4-219ENST00000567399 TOB2Q14106 344 aaPredicted RBP17.55■□□□□ 0.4
COMMD4-219ENST00000567399 RNF207Q6ZRF8 634 aa17.55■□□□□ 0.4
COMMD4-219ENST00000567399 TMTC3Q6ZXV5 915 aa17.55■□□□□ 0.4
COMMD4-219ENST00000567399 NOL8Q76FK4 1167 aaKnown RBP17.55■□□□□ 0.4
COMMD4-219ENST00000567399 MCF2L2Q86YR7 1114 aa17.55■□□□□ 0.4
COMMD4-219ENST00000567399 TRIB2Q92519 343 aa17.55■□□□□ 0.4
COMMD4-219ENST00000567399 ARMC5Q96C12 935 aa17.55■□□□□ 0.4
COMMD4-219ENST00000567399 AGXT2Q9BYV1 514 aa17.55■□□□□ 0.4
COMMD4-219ENST00000567399 PLXNB2O15031 1838 aa17.54■□□□□ 0.4
COMMD4-219ENST00000567399 CCT2P78371 535 aaKnown RBP17.54■□□□□ 0.4
COMMD4-219ENST00000567399 AKAP17AQ02040 695 aaKnown RBP17.54■□□□□ 0.4
COMMD4-219ENST00000567399 STK3Q13188 491 aa17.54■□□□□ 0.4
COMMD4-219ENST00000567399 BAATQ14032 418 aaPredicted RBP17.54■□□□□ 0.4
COMMD4-219ENST00000567399 MTMR8Q96EF0 704 aa17.54■□□□□ 0.4
COMMD4-219ENST00000567399 MAML3Q96JK9 1138 aa17.54■□□□□ 0.4
COMMD4-219ENST00000567399 ZNF333Q96JL9 665 aa17.54■□□□□ 0.4
COMMD4-219ENST00000567399 A1CFQ9NQ94 594 aaKnown RBP17.54■□□□□ 0.4
COMMD4-219ENST00000567399 DIS3Q9Y2L1 958 aaKnown RBP17.54■□□□□ 0.4
COMMD4-219ENST00000567399 NFIBO00712 420 aa17.53■□□□□ 0.4
COMMD4-219ENST00000567399 CPLX1O14810 134 aa17.53■□□□□ 0.4
COMMD4-219ENST00000567399 PDIA3P30101 505 aaKnown RBP17.53■□□□□ 0.4
COMMD4-219ENST00000567399 ADD1P35611 737 aaKnown RBP17.53■□□□□ 0.4
COMMD4-219ENST00000567399 ZNF792Q3KQV3 632 aa17.53■□□□□ 0.4
COMMD4-219ENST00000567399 OLFML2BQ68BL8 750 aa17.53■□□□□ 0.4
COMMD4-219ENST00000567399 CPLX2Q6PUV4 134 aaKnown RBP17.53■□□□□ 0.4
COMMD4-219ENST00000567399 ZNF274Q96GC6 653 aaPredicted RBP17.53■□□□□ 0.4
COMMD4-219ENST00000567399 RNF208Q9H0X6 261 aa17.53■□□□□ 0.4
COMMD4-219ENST00000567399 HMX1Q9NP08 348 aaPredicted RBP17.53■□□□□ 0.4
COMMD4-219ENST00000567399 CYP39A1Q9NYL5 469 aa17.53■□□□□ 0.4
COMMD4-219ENST00000567399 hCG_1642624A0A1W2PR95 340 aa17.52■□□□□ 0.4
COMMD4-219ENST00000567399 CFBP00751 764 aa17.52■□□□□ 0.4
COMMD4-219ENST00000567399 CCL5P13501 91 aa17.52■□□□□ 0.4
COMMD4-219ENST00000567399 PRKAR2AP13861 404 aaKnown RBP17.52■□□□□ 0.4
COMMD4-219ENST00000567399 CNGA1P29973 690 aa17.52■□□□□ 0.4
COMMD4-219ENST00000567399 CDC27P30260 824 aa17.52■□□□□ 0.4
COMMD4-219ENST00000567399 CYP2C19P33261 490 aa17.52■□□□□ 0.4
COMMD4-219ENST00000567399 AK2P54819 239 aa17.52■□□□□ 0.4
COMMD4-219ENST00000567399 TRIM32Q13049 653 aa17.52■□□□□ 0.4
COMMD4-219ENST00000567399 SLC35G1Q2M3R5 365 aa17.52■□□□□ 0.4
COMMD4-219ENST00000567399 DHX30Q7L2E3 1194 aaKnown RBP eCLIP17.52■□□□□ 0.4
COMMD4-219ENST00000567399 CLEC4DQ8WXI8 215 aa17.52■□□□□ 0.4
COMMD4-219ENST00000567399 MPHOSPH6Q99547 160 aaKnown RBP17.52■□□□□ 0.4
COMMD4-219ENST00000567399 ALDH8A1Q9H2A2 487 aaPredicted RBP17.52■□□□□ 0.4
COMMD4-219ENST00000567399 SLKQ9H2G2 1235 aaPredicted RBP17.52■□□□□ 0.4
COMMD4-219ENST00000567399 FLRT1Q9NZU1 646 aa17.52■□□□□ 0.4
COMMD4-219ENST00000567399 ADD3Q9UEY8 706 aaKnown RBP17.52■□□□□ 0.4
COMMD4-219ENST00000567399 V9GY48 417 aaPredicted RBP17.52■□□□□ 0.4
COMMD4-219ENST00000567399 DNAJC25-GNG10A0A024R161 153 aa17.51■□□□□ 0.39
COMMD4-219ENST00000567399 RBM25P49756 843 aaKnown RBP17.51■□□□□ 0.39
COMMD4-219ENST00000567399 CNTN2Q02246 1040 aa17.51■□□□□ 0.39
COMMD4-219ENST00000567399 CACNB2Q08289 660 aaPredicted RBP17.51■□□□□ 0.39
COMMD4-219ENST00000567399 MTFR1Q15390 333 aa17.51■□□□□ 0.39
COMMD4-219ENST00000567399 HEATR3Q7Z4Q2 680 aa17.51■□□□□ 0.39
COMMD4-219ENST00000567399 IL17RAQ96F46 866 aa17.51■□□□□ 0.39
COMMD4-219ENST00000567399 TINF2Q9BSI4 451 aa17.51■□□□□ 0.39
COMMD4-219ENST00000567399 BACH2Q9BYV9 841 aa17.51■□□□□ 0.39
COMMD4-219ENST00000567399 CNPY2Q9Y2B0 182 aa17.51■□□□□ 0.39
COMMD4-219ENST00000567399 RPTORQ8N122 1335 aa17.5■□□□□ 0.39
COMMD4-219ENST00000567399 B4DLN1 442 aa17.5■□□□□ 0.39
COMMD4-219ENST00000567399 PPP1R11O60927 126 aaPredicted RBP17.5■□□□□ 0.39
COMMD4-219ENST00000567399 MRPL12P52815 198 aaKnown RBP17.5■□□□□ 0.39
COMMD4-219ENST00000567399 EVCP57679 992 aa17.5■□□□□ 0.39
COMMD4-219ENST00000567399 RPS6P62753 249 aaKnown RBP17.5■□□□□ 0.39
COMMD4-219ENST00000567399 RGS22Q8NE09 1264 aa17.5■□□□□ 0.39
COMMD4-219ENST00000567399 CUL5Q93034 780 aa17.5■□□□□ 0.39
COMMD4-219ENST00000567399 UNC93B1Q9H1C4 597 aa17.5■□□□□ 0.39
COMMD4-219ENST00000567399 NCOA5Q9HCD5 579 aaKnown RBP17.5■□□□□ 0.39
COMMD4-219ENST00000567399 FAM217BQ9NTX9 383 aaPredicted RBP17.5■□□□□ 0.39
COMMD4-219ENST00000567399 ASB14A6NK59 587 aa17.49■□□□□ 0.39
COMMD4-219ENST00000567399 GCOM1H8Y6P7 765 aaPredicted RBP17.49■□□□□ 0.39
COMMD4-219ENST00000567399 POLR2MP0CAP2 368 aa17.49■□□□□ 0.39
COMMD4-219ENST00000567399 SOX10P56693 466 aa17.49■□□□□ 0.39
COMMD4-219ENST00000567399 SLC30A10Q6XR72 485 aa17.49■□□□□ 0.39
COMMD4-219ENST00000567399 ZNF467Q7Z7K2 595 aaPredicted RBP17.49■□□□□ 0.39
COMMD4-219ENST00000567399 TRIM22Q8IYM9 498 aa17.49■□□□□ 0.39
COMMD4-219ENST00000567399 MSL3Q8N5Y2 521 aaKnown RBP17.49■□□□□ 0.39
COMMD4-219ENST00000567399 FAM133AQ8N9E0 248 aa17.49■□□□□ 0.39
COMMD4-219ENST00000567399 SLC26A6Q9BXS9 759 aa17.49■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms