RNA–Protein interactions for RNA: ENST00000567250.5

SF3B3-208, Transcript of splicing factor 3b subunit 3, humanhuman

TSL 3

Gene SF3B3, Length 1,084 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-208ENST00000567250 FLT3LGP49771 235 aa14.1□□□□□ -0.15
SF3B3-208ENST00000567250 SNAP25P60880 206 aa14.1□□□□□ -0.15
SF3B3-208ENST00000567250 MAP2K5Q13163 448 aa14.1□□□□□ -0.15
SF3B3-208ENST00000567250 USH1GQ495M9 461 aa14.1□□□□□ -0.15
SF3B3-208ENST00000567250 MORN1Q5T089 497 aa14.1□□□□□ -0.15
SF3B3-208ENST00000567250 TRMT44Q8IYL2 757 aaKnown RBP14.1□□□□□ -0.15
SF3B3-208ENST00000567250 ANKRD35Q8N283 1001 aa14.1□□□□□ -0.15
SF3B3-208ENST00000567250 SLAIN1Q8ND83 568 aa14.1□□□□□ -0.15
SF3B3-208ENST00000567250 MTMR8Q96EF0 704 aa14.1□□□□□ -0.15
SF3B3-208ENST00000567250 TRERF1Q96PN7 1200 aa14.1□□□□□ -0.15
SF3B3-208ENST00000567250 MAF1Q9H063 256 aa14.1□□□□□ -0.15
SF3B3-208ENST00000567250 BAZ2BQ9UIF8 2168 aaKnown RBP14.1□□□□□ -0.15
SF3B3-208ENST00000567250 CNTNAP5Q8WYK1 1306 aa14.1□□□□□ -0.15
SF3B3-208ENST00000567250 SMCHD1A6NHR9 2005 aa14.09□□□□□ -0.15
SF3B3-208ENST00000567250 PNMA6FA0A0J9YX94 578 aa14.09□□□□□ -0.15
SF3B3-208ENST00000567250 CPLX1O14810 134 aa14.09□□□□□ -0.15
SF3B3-208ENST00000567250 CYTH3O43739 400 aa14.09□□□□□ -0.15
SF3B3-208ENST00000567250 XRCC5P13010 732 aaKnown RBP14.09□□□□□ -0.15
SF3B3-208ENST00000567250 ADORA2AP29274 412 aa14.09□□□□□ -0.15
SF3B3-208ENST00000567250 PDIA3P30101 505 aaKnown RBP14.09□□□□□ -0.15
SF3B3-208ENST00000567250 DPP9Q86TI2 863 aa14.09□□□□□ -0.15
SF3B3-208ENST00000567250 PXYLP1Q8TE99 480 aa14.09□□□□□ -0.15
SF3B3-208ENST00000567250 DDX11Q96FC9 970 aa14.09□□□□□ -0.15
SF3B3-208ENST00000567250 PIGSQ96S52 555 aa14.09□□□□□ -0.15
SF3B3-208ENST00000567250 MRPL11Q9Y3B7 192 aaKnown RBP14.09□□□□□ -0.15
SF3B3-208ENST00000567250 RIPK3Q9Y572 518 aa14.09□□□□□ -0.15
SF3B3-208ENST00000567250 HTTP42858 3142 aa14.09□□□□□ -0.15
SF3B3-208ENST00000567250 LCTP09848 1927 aa14.09□□□□□ -0.15
SF3B3-208ENST00000567250 hCG_1984214I3L0E3 225 aa14.08□□□□□ -0.16
SF3B3-208ENST00000567250 CDKL5O76039 1030 aa14.08□□□□□ -0.16
SF3B3-208ENST00000567250 HOXC6P09630 235 aa14.08□□□□□ -0.16
SF3B3-208ENST00000567250 CAP1Q01518 475 aa14.08□□□□□ -0.16
SF3B3-208ENST00000567250 SLC9C1Q4G0N8 1177 aa14.08□□□□□ -0.16
SF3B3-208ENST00000567250 NBPF11Q86T75 865 aa14.08□□□□□ -0.16
SF3B3-208ENST00000567250 MCF2L2Q86YR7 1114 aa14.08□□□□□ -0.16
SF3B3-208ENST00000567250 SRBD1Q8N5C6 995 aaKnown RBP14.08□□□□□ -0.16
SF3B3-208ENST00000567250 ZNF713Q8N859 430 aaPredicted RBP14.08□□□□□ -0.16
SF3B3-208ENST00000567250 KIF2CQ99661 725 aa14.08□□□□□ -0.16
SF3B3-208ENST00000567250 MCOLN1Q9GZU1 580 aa14.08□□□□□ -0.16
SF3B3-208ENST00000567250 SLKQ9H2G2 1235 aaPredicted RBP14.08□□□□□ -0.16
SF3B3-208ENST00000567250 GABRQQ9UN88 632 aa14.08□□□□□ -0.16
SF3B3-208ENST00000567250 HPS5Q9UPZ3 1129 aa14.08□□□□□ -0.16
SF3B3-208ENST00000567250 PTCH2Q9Y6C5 1203 aa14.08□□□□□ -0.16
SF3B3-208ENST00000567250 CDC27P30260 824 aa14.07□□□□□ -0.16
SF3B3-208ENST00000567250 GRK4P32298 578 aa14.07□□□□□ -0.16
SF3B3-208ENST00000567250 AKAP17AQ02040 695 aaKnown RBP14.07□□□□□ -0.16
SF3B3-208ENST00000567250 COL13A1Q5TAT6 717 aaPredicted RBP14.07□□□□□ -0.16
SF3B3-208ENST00000567250 NSMFQ6X4W1 530 aa14.07□□□□□ -0.16
SF3B3-208ENST00000567250 TRIM22Q8IYM9 498 aa14.07□□□□□ -0.16
SF3B3-208ENST00000567250 USP6NLQ92738 828 aa14.07□□□□□ -0.16
SF3B3-208ENST00000567250 RNF26Q9BY78 433 aaPredicted RBP14.07□□□□□ -0.16
SF3B3-208ENST00000567250 A1CFQ9NQ94 594 aaKnown RBP14.07□□□□□ -0.16
SF3B3-208ENST00000567250 GJD2Q9UKL4 321 aa14.07□□□□□ -0.16
SF3B3-208ENST00000567250 DIS3Q9Y2L1 958 aaKnown RBP14.07□□□□□ -0.16
SF3B3-208ENST00000567250 PCDHA1Q9Y5I3 950 aa14.07□□□□□ -0.16
SF3B3-208ENST00000567250 LRRC37A2A6NM11 1700 aa14.07□□□□□ -0.16
SF3B3-208ENST00000567250 PTPDC1A2A3K4 754 aa14.06□□□□□ -0.16
SF3B3-208ENST00000567250 ADCY3O60266 1144 aa14.06□□□□□ -0.16
SF3B3-208ENST00000567250 HMGCRP04035 888 aa14.06□□□□□ -0.16
SF3B3-208ENST00000567250 IFNAR1P17181 557 aa14.06□□□□□ -0.16
SF3B3-208ENST00000567250 CYP2B6P20813 491 aa14.06□□□□□ -0.16
SF3B3-208ENST00000567250 MCM2P49736 904 aa14.06□□□□□ -0.16
SF3B3-208ENST00000567250 UBXN2AP68543 259 aa14.06□□□□□ -0.16
SF3B3-208ENST00000567250 STK3Q13188 491 aa14.06□□□□□ -0.16
SF3B3-208ENST00000567250 SLC35G1Q2M3R5 365 aa14.06□□□□□ -0.16
SF3B3-208ENST00000567250 MUM1L1Q5H9M0 696 aa14.06□□□□□ -0.16
SF3B3-208ENST00000567250 PPP1R18Q6NYC8 613 aa14.06□□□□□ -0.16
SF3B3-208ENST00000567250 RNF207Q6ZRF8 634 aa14.06□□□□□ -0.16
SF3B3-208ENST00000567250 NOL8Q76FK4 1167 aaKnown RBP14.06□□□□□ -0.16
SF3B3-208ENST00000567250 CMTR1Q8N1G2 835 aaKnown RBP14.06□□□□□ -0.16
SF3B3-208ENST00000567250 CCDC82Q8N4S0 544 aa14.06□□□□□ -0.16
SF3B3-208ENST00000567250 SAMD3Q8N6K7 520 aa14.06□□□□□ -0.16
SF3B3-208ENST00000567250 PIBF1Q8WXW3 757 aa14.06□□□□□ -0.16
SF3B3-208ENST00000567250 MPHOSPH6Q99547 160 aaKnown RBP14.06□□□□□ -0.16
SF3B3-208ENST00000567250 MAP3K20Q9NYL2 800 aaKnown RBP14.06□□□□□ -0.16
SF3B3-208ENST00000567250 TPCN1Q9ULQ1 816 aa14.06□□□□□ -0.16
SF3B3-208ENST00000567250 POTEB2H3BUK9 544 aa14.05□□□□□ -0.16
SF3B3-208ENST00000567250 NFIBO00712 420 aa14.05□□□□□ -0.16
SF3B3-208ENST00000567250 PFKFB2O60825 505 aa14.05□□□□□ -0.16
SF3B3-208ENST00000567250 ADD1P35611 737 aaKnown RBP14.05□□□□□ -0.16
SF3B3-208ENST00000567250 CCT2P78371 535 aaKnown RBP14.05□□□□□ -0.16
SF3B3-208ENST00000567250 OLFML2BQ68BL8 750 aa14.05□□□□□ -0.16
SF3B3-208ENST00000567250 TNS4Q8IZW8 715 aa14.05□□□□□ -0.16
SF3B3-208ENST00000567250 RGS22Q8NE09 1264 aa14.05□□□□□ -0.16
SF3B3-208ENST00000567250 CCDC12Q8WUD4 166 aaPredicted RBP14.05□□□□□ -0.16
SF3B3-208ENST00000567250 GTF3C6Q969F1 213 aa14.05□□□□□ -0.16
SF3B3-208ENST00000567250 ZSCAN31Q96LW9 406 aaPredicted RBP14.05□□□□□ -0.16
SF3B3-208ENST00000567250 NCOA5Q9HCD5 579 aaKnown RBP14.05□□□□□ -0.16
SF3B3-208ENST00000567250 FAM217BQ9NTX9 383 aaPredicted RBP14.05□□□□□ -0.16
SF3B3-208ENST00000567250 CYP39A1Q9NYL5 469 aa14.05□□□□□ -0.16
SF3B3-208ENST00000567250 BIN2Q9UBW5 565 aaPredicted RBP14.05□□□□□ -0.16
SF3B3-208ENST00000567250 ADD3Q9UEY8 706 aaKnown RBP14.05□□□□□ -0.16
SF3B3-208ENST00000567250 LIMCH1Q9UPQ0 1083 aa14.05□□□□□ -0.16
SF3B3-208ENST00000567250 FRMPD3Q5JV73 1810 aa14.04□□□□□ -0.16
SF3B3-208ENST00000567250 DNAJC25-GNG10A0A024R161 153 aa14.04□□□□□ -0.16
SF3B3-208ENST00000567250 LOC102724159A0A0B4J2E5 919 aa14.04□□□□□ -0.16
SF3B3-208ENST00000567250 PPP1R11O60927 126 aaPredicted RBP14.04□□□□□ -0.16
SF3B3-208ENST00000567250 FUT2Q10981 343 aa14.04□□□□□ -0.16
SF3B3-208ENST00000567250 PWP2Q15269 919 aaKnown RBP14.04□□□□□ -0.16
SF3B3-208ENST00000567250 ZNF792Q3KQV3 632 aa14.04□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 84.9 ms