RNA–Protein interactions for RNA: ENST00000566915.5

LPCAT2-208, Transcript of lysophosphatidylcholine acyltransferase 2, humanhuman

TSL 1 (best)

Gene LPCAT2, Length 5,285 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LPCAT2-208ENST00000566915 AOC3Q16853 763 aa4.79□□□□□ -1.64
LPCAT2-208ENST00000566915 LONRF2Q1L5Z9 754 aa4.79□□□□□ -1.64
LPCAT2-208ENST00000566915 HERC4Q5GLZ8 1057 aaPredicted RBP4.79□□□□□ -1.64
LPCAT2-208ENST00000566915 H2AFVQ71UI9 128 aa4.79□□□□□ -1.64
LPCAT2-208ENST00000566915 CCDC25Q86WR0 208 aa4.79□□□□□ -1.64
LPCAT2-208ENST00000566915 VPS52Q8N1B4 723 aa4.79□□□□□ -1.64
LPCAT2-208ENST00000566915 LARGE2Q8N3Y3 721 aa4.79□□□□□ -1.64
LPCAT2-208ENST00000566915 TTLL6Q8N841 843 aa4.79□□□□□ -1.64
LPCAT2-208ENST00000566915 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP4.79□□□□□ -1.64
LPCAT2-208ENST00000566915 PBKQ96KB5 322 aa4.79□□□□□ -1.64
LPCAT2-208ENST00000566915 JRKLQ9Y4A0 524 aa4.79□□□□□ -1.64
LPCAT2-208ENST00000566915 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP4.78□□□□□ -1.64
LPCAT2-208ENST00000566915 ANO9A1A5B4 782 aa4.78□□□□□ -1.64
LPCAT2-208ENST00000566915 CCNT1O60563 726 aaKnown RBP4.78□□□□□ -1.64
LPCAT2-208ENST00000566915 JAK2O60674 1132 aa4.78□□□□□ -1.64
LPCAT2-208ENST00000566915 SUN1O94901 812 aa4.78□□□□□ -1.64
LPCAT2-208ENST00000566915 HSPD1P10809 573 aaKnown RBP4.78□□□□□ -1.64
LPCAT2-208ENST00000566915 PDIA3P30101 505 aaKnown RBP4.78□□□□□ -1.64
LPCAT2-208ENST00000566915 TIMM10P62072 90 aa4.78□□□□□ -1.64
LPCAT2-208ENST00000566915 PSMD2Q13200 908 aa4.78□□□□□ -1.64
LPCAT2-208ENST00000566915 ORC2Q13416 577 aaPredicted RBP4.78□□□□□ -1.64
LPCAT2-208ENST00000566915 NBPF9Q3BBW0 867 aa4.78□□□□□ -1.64
LPCAT2-208ENST00000566915 ZMYM1Q5SVZ6 1142 aa4.78□□□□□ -1.64
LPCAT2-208ENST00000566915 BLIDQ8IZY5 108 aa4.78□□□□□ -1.64
LPCAT2-208ENST00000566915 MIPOL1Q8TD10 442 aa4.78□□□□□ -1.64
LPCAT2-208ENST00000566915 ARHGEF10LQ9HCE6 1279 aa4.78□□□□□ -1.64
LPCAT2-208ENST00000566915 ZNF219Q9P2Y4 722 aaPredicted RBP4.78□□□□□ -1.64
LPCAT2-208ENST00000566915 STK17AQ9UEE5 414 aa4.78□□□□□ -1.64
LPCAT2-208ENST00000566915 ASIC3Q9UHC3 531 aa4.78□□□□□ -1.64
LPCAT2-208ENST00000566915 LCMT1Q9UIC8 334 aa4.78□□□□□ -1.64
LPCAT2-208ENST00000566915 ABCC12Q96J65 1359 aa4.78□□□□□ -1.64
LPCAT2-208ENST00000566915 ARHGEF35A5YM69 484 aa4.78□□□□□ -1.64
LPCAT2-208ENST00000566915 CCDC160A6NGH7 325 aa4.78□□□□□ -1.64
LPCAT2-208ENST00000566915 FOSP01100 380 aaPredicted RBP4.78□□□□□ -1.64
LPCAT2-208ENST00000566915 LMNB1P20700 586 aa4.78□□□□□ -1.64
LPCAT2-208ENST00000566915 STX2P32856 288 aa4.78□□□□□ -1.64
LPCAT2-208ENST00000566915 COPB1P53618 953 aaKnown RBP4.78□□□□□ -1.64
LPCAT2-208ENST00000566915 BPIFB4P59827 614 aa4.78□□□□□ -1.64
LPCAT2-208ENST00000566915 TGFB2P61812 414 aa4.78□□□□□ -1.64
LPCAT2-208ENST00000566915 ITIH3Q06033 890 aa4.78□□□□□ -1.64
LPCAT2-208ENST00000566915 SNCBQ16143 134 aa4.78□□□□□ -1.64
LPCAT2-208ENST00000566915 VSTM4Q8IW00 320 aa4.78□□□□□ -1.64
LPCAT2-208ENST00000566915 CCDC105Q8IYK2 499 aa4.78□□□□□ -1.64
LPCAT2-208ENST00000566915 NCOA5Q9HCD5 579 aaKnown RBP4.78□□□□□ -1.64
LPCAT2-208ENST00000566915 VCX3AQ9NNX9 186 aa4.78□□□□□ -1.64
LPCAT2-208ENST00000566915 KNDC1Q76NI1 1749 aa4.78□□□□□ -1.64
LPCAT2-208ENST00000566915 TNS2Q63HR2 1409 aa4.78□□□□□ -1.64
LPCAT2-208ENST00000566915 SART1O43290 800 aaKnown RBP4.78□□□□□ -1.64
LPCAT2-208ENST00000566915 PCCAP05165 728 aaPredicted RBP4.78□□□□□ -1.64
LPCAT2-208ENST00000566915 SLFN14P0C7P3 912 aa4.78□□□□□ -1.64
LPCAT2-208ENST00000566915 GCFC2P16383 781 aaKnown RBP4.78□□□□□ -1.64
LPCAT2-208ENST00000566915 LIFRP42702 1097 aa4.78□□□□□ -1.64
LPCAT2-208ENST00000566915 PPARAQ07869 468 aa4.78□□□□□ -1.64
LPCAT2-208ENST00000566915 PNOCQ13519 176 aa4.78□□□□□ -1.64
LPCAT2-208ENST00000566915 CDC37Q16543 378 aaPredicted RBP4.78□□□□□ -1.64
LPCAT2-208ENST00000566915 ARL6IP4Q66PJ3 421 aaKnown RBP4.78□□□□□ -1.64
LPCAT2-208ENST00000566915 FAM173BQ6P4H8 233 aa4.78□□□□□ -1.64
LPCAT2-208ENST00000566915 RRAGAQ7L523 313 aa4.78□□□□□ -1.64
LPCAT2-208ENST00000566915 TEX11Q8IYF3 940 aa4.78□□□□□ -1.64
LPCAT2-208ENST00000566915 ZNF579Q8NAF0 562 aaKnown RBP4.78□□□□□ -1.64
LPCAT2-208ENST00000566915 SMC1BQ8NDV3 1235 aa4.78□□□□□ -1.64
LPCAT2-208ENST00000566915 TCHPQ9BT92 498 aa4.78□□□□□ -1.64
LPCAT2-208ENST00000566915 PPP1R12CQ9BZL4 782 aa4.78□□□□□ -1.64
LPCAT2-208ENST00000566915 OSBPL5Q9H0X9 879 aaPredicted RBP4.78□□□□□ -1.64
LPCAT2-208ENST00000566915 THAP9Q9H5L6 903 aa4.78□□□□□ -1.64
LPCAT2-208ENST00000566915 FANCLQ9NW38 375 aa4.78□□□□□ -1.64
LPCAT2-208ENST00000566915 ARMCX3Q9UH62 379 aaPredicted RBP4.78□□□□□ -1.64
LPCAT2-208ENST00000566915 CAPN7Q9Y6W3 813 aa4.78□□□□□ -1.64
LPCAT2-208ENST00000566915 PASKQ96RG2 1323 aa4.78□□□□□ -1.64
LPCAT2-208ENST00000566915 ZNF532Q9HCE3 1301 aa4.78□□□□□ -1.64
LPCAT2-208ENST00000566915 CD163L1Q9NR16 1453 aa4.78□□□□□ -1.64
LPCAT2-208ENST00000566915 CCDC188H7C350 402 aa4.78□□□□□ -1.64
LPCAT2-208ENST00000566915 OR52Z1P0C646 297 aa4.78□□□□□ -1.64
LPCAT2-208ENST00000566915 ZBED6P86452 979 aa4.78□□□□□ -1.64
LPCAT2-208ENST00000566915 OTUD7BQ6GQQ9 843 aa4.78□□□□□ -1.64
LPCAT2-208ENST00000566915 DEFB132Q7Z7B7 95 aa4.78□□□□□ -1.64
LPCAT2-208ENST00000566915 PNMA8AQ86V59 439 aaPredicted RBP4.78□□□□□ -1.64
LPCAT2-208ENST00000566915 LINC00301Q8NCQ3 95 aa4.78□□□□□ -1.64
LPCAT2-208ENST00000566915 EAF2Q96CJ1 260 aaPredicted RBP4.78□□□□□ -1.64
LPCAT2-208ENST00000566915 HAUS1Q96CS2 278 aa4.78□□□□□ -1.64
LPCAT2-208ENST00000566915 RWDD2AQ9UIY3 292 aa4.78□□□□□ -1.64
LPCAT2-208ENST00000566915 CARMIL3Q8ND23 1372 aa4.77□□□□□ -1.65
LPCAT2-208ENST00000566915 RPN1P04843 607 aaKnown RBP4.77□□□□□ -1.65
LPCAT2-208ENST00000566915 SCG2P13521 617 aa4.77□□□□□ -1.65
LPCAT2-208ENST00000566915 NPR1P16066 1061 aa4.77□□□□□ -1.65
LPCAT2-208ENST00000566915 CUL1Q13616 776 aa4.77□□□□□ -1.65
LPCAT2-208ENST00000566915 CCDC197Q8NCU1 140 aa4.77□□□□□ -1.65
LPCAT2-208ENST00000566915 TBC1D31Q96DN5 1066 aa4.77□□□□□ -1.65
LPCAT2-208ENST00000566915 ZSCAN10Q96SZ4 725 aaPredicted RBP4.77□□□□□ -1.65
LPCAT2-208ENST00000566915 DDX23Q9BUQ8 820 aaKnown RBP4.77□□□□□ -1.65
LPCAT2-208ENST00000566915 PALD1Q9ULE6 856 aa4.77□□□□□ -1.65
LPCAT2-208ENST00000566915 AGTPBP1Q9UPW5 1226 aa4.77□□□□□ -1.65
LPCAT2-208ENST00000566915 RRP15Q9Y3B9 282 aaKnown RBP4.77□□□□□ -1.65
LPCAT2-208ENST00000566915 TMEM110-MUSTN1A8MSY1 372 aa4.77□□□□□ -1.65
LPCAT2-208ENST00000566915 KRIT1O00522 736 aa4.77□□□□□ -1.65
LPCAT2-208ENST00000566915 FMNL1O95466 1100 aaPredicted RBP4.77□□□□□ -1.65
LPCAT2-208ENST00000566915 IFNAR1P17181 557 aa4.77□□□□□ -1.65
LPCAT2-208ENST00000566915 TXKP42681 527 aa4.77□□□□□ -1.65
LPCAT2-208ENST00000566915 CRKLP46109 303 aaKnown RBP4.77□□□□□ -1.65
LPCAT2-208ENST00000566915 ADKP55263 362 aaKnown RBP4.77□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms