RNA–Protein interactions for RNA: ENST00000566811.5

RNF40-210, Transcript of ring finger protein 40, humanhuman

TSL 2

Gene RNF40, Length 569 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF40-210ENST00000566811 CPVLQ9H3G5 476 aa23.5■■□□□ 1.35
RNF40-210ENST00000566811 RNF146Q9NTX7 359 aa23.5■■□□□ 1.35
RNF40-210ENST00000566811 LIMCH1Q9UPQ0 1083 aa23.5■■□□□ 1.35
RNF40-210ENST00000566811 SMCHD1A6NHR9 2005 aa23.5■■□□□ 1.35
RNF40-210ENST00000566811 CPLX1O14810 134 aa23.49■■□□□ 1.35
RNF40-210ENST00000566811 PEX10O60683 326 aa23.49■■□□□ 1.35
RNF40-210ENST00000566811 PFKFB2O60825 505 aa23.49■■□□□ 1.35
RNF40-210ENST00000566811 XRCC5P13010 732 aaKnown RBP23.49■■□□□ 1.35
RNF40-210ENST00000566811 ALAS1P13196 640 aa23.49■■□□□ 1.35
RNF40-210ENST00000566811 IFNAR1P17181 557 aa23.49■■□□□ 1.35
RNF40-210ENST00000566811 CTGFP29279 349 aa23.49■■□□□ 1.35
RNF40-210ENST00000566811 HOMER1Q86YM7 354 aa23.49■■□□□ 1.35
RNF40-210ENST00000566811 RAB11FIP4Q86YS3 637 aa23.49■■□□□ 1.35
RNF40-210ENST00000566811 TRMT44Q8IYL2 757 aaKnown RBP23.49■■□□□ 1.35
RNF40-210ENST00000566811 ZSCAN31Q96LW9 406 aaPredicted RBP23.49■■□□□ 1.35
RNF40-210ENST00000566811 TRERF1Q96PN7 1200 aa23.49■■□□□ 1.35
RNF40-210ENST00000566811 MMP19Q99542 508 aa23.49■■□□□ 1.35
RNF40-210ENST00000566811 VAT1LQ9HCJ6 419 aa23.49■■□□□ 1.35
RNF40-210ENST00000566811 SH2B1Q9NRF2 756 aaPredicted RBP23.49■■□□□ 1.35
RNF40-210ENST00000566811 FAM217BQ9NTX9 383 aaPredicted RBP23.49■■□□□ 1.35
RNF40-210ENST00000566811 MRPL11Q9Y3B7 192 aaKnown RBP23.49■■□□□ 1.35
RNF40-210ENST00000566811 CDC27P30260 824 aa23.48■■□□□ 1.35
RNF40-210ENST00000566811 RGS2P41220 211 aa23.48■■□□□ 1.35
RNF40-210ENST00000566811 NBPF11Q86T75 865 aa23.48■■□□□ 1.35
RNF40-210ENST00000566811 PIGSQ96S52 555 aa23.48■■□□□ 1.35
RNF40-210ENST00000566811 APBA2Q99767 749 aa23.48■■□□□ 1.35
RNF40-210ENST00000566811 RNF26Q9BY78 433 aaPredicted RBP23.48■■□□□ 1.35
RNF40-210ENST00000566811 TPCN1Q9ULQ1 816 aa23.48■■□□□ 1.35
RNF40-210ENST00000566811 HOXC6P09630 235 aa23.47■■□□□ 1.35
RNF40-210ENST00000566811 ADD1P35611 737 aaKnown RBP23.47■■□□□ 1.35
RNF40-210ENST00000566811 FUT2Q10981 343 aa23.47■■□□□ 1.35
RNF40-210ENST00000566811 MAP2K5Q13163 448 aa23.47■■□□□ 1.35
RNF40-210ENST00000566811 MORN1Q5T089 497 aa23.47■■□□□ 1.35
RNF40-210ENST00000566811 MCF2L2Q86YR7 1114 aa23.47■■□□□ 1.35
RNF40-210ENST00000566811 TRIM22Q8IYM9 498 aa23.47■■□□□ 1.35
RNF40-210ENST00000566811 RGS22Q8NE09 1264 aa23.47■■□□□ 1.35
RNF40-210ENST00000566811 MAP3K20Q9NYL2 800 aaKnown RBP23.47■■□□□ 1.35
RNF40-210ENST00000566811 RIPK3Q9Y572 518 aa23.47■■□□□ 1.35
RNF40-210ENST00000566811 ADORA2AP29274 412 aa23.46■■□□□ 1.35
RNF40-210ENST00000566811 SNAP25P60880 206 aa23.46■■□□□ 1.35
RNF40-210ENST00000566811 AKAP17AQ02040 695 aaKnown RBP23.46■■□□□ 1.35
RNF40-210ENST00000566811 PRKCZQ05513 592 aa23.46■■□□□ 1.35
RNF40-210ENST00000566811 SLC35G1Q2M3R5 365 aa23.46■■□□□ 1.35
RNF40-210ENST00000566811 PPP1R18Q6NYC8 613 aa23.46■■□□□ 1.35
RNF40-210ENST00000566811 ANKRD35Q8N283 1001 aa23.46■■□□□ 1.35
RNF40-210ENST00000566811 RAET1EQ8TD07 263 aa23.46■■□□□ 1.35
RNF40-210ENST00000566811 USP6NLQ92738 828 aa23.46■■□□□ 1.35
RNF40-210ENST00000566811 GTF3C6Q969F1 213 aa23.46■■□□□ 1.35
RNF40-210ENST00000566811 GJD2Q9UKL4 321 aa23.46■■□□□ 1.35
RNF40-210ENST00000566811 DIS3Q9Y2L1 958 aaKnown RBP23.46■■□□□ 1.35
RNF40-210ENST00000566811 PTPN22Q9Y2R2 807 aa23.46■■□□□ 1.35
RNF40-210ENST00000566811 PCDHA1Q9Y5I3 950 aa23.46■■□□□ 1.35
RNF40-210ENST00000566811 FLT3LGP49771 235 aa23.45■■□□□ 1.34
RNF40-210ENST00000566811 CCT2P78371 535 aaKnown RBP23.45■■□□□ 1.34
RNF40-210ENST00000566811 NTRK3Q16288 839 aa23.45■■□□□ 1.34
RNF40-210ENST00000566811 USH1GQ495M9 461 aa23.45■■□□□ 1.34
RNF40-210ENST00000566811 FAM177A1Q8N128 213 aaPredicted RBP23.45■■□□□ 1.34
RNF40-210ENST00000566811 SLAIN1Q8ND83 568 aa23.45■■□□□ 1.34
RNF40-210ENST00000566811 PXYLP1Q8TE99 480 aa23.45■■□□□ 1.34
RNF40-210ENST00000566811 HOMER2Q9NSB8 354 aa23.45■■□□□ 1.34
RNF40-210ENST00000566811 STK36Q9NRP7 1315 aa23.44■■□□□ 1.34
RNF40-210ENST00000566811 LCTP09848 1927 aa23.44■■□□□ 1.34
RNF40-210ENST00000566811 LOC102724159A0A0B4J2E5 919 aa23.44■■□□□ 1.34
RNF40-210ENST00000566811 PRPF3O43395 683 aaKnown RBP23.44■■□□□ 1.34
RNF40-210ENST00000566811 SLC4A3P48751 1232 aa23.44■■□□□ 1.34
RNF40-210ENST00000566811 CAP1Q01518 475 aa23.44■■□□□ 1.34
RNF40-210ENST00000566811 GHRHRQ02643 423 aa23.44■■□□□ 1.34
RNF40-210ENST00000566811 SCRN1Q12765 414 aa23.44■■□□□ 1.34
RNF40-210ENST00000566811 PWP2Q15269 919 aaKnown RBP23.44■■□□□ 1.34
RNF40-210ENST00000566811 DPP9Q86TI2 863 aa23.44■■□□□ 1.34
RNF40-210ENST00000566811 DDX11Q96FC9 970 aa23.44■■□□□ 1.34
RNF40-210ENST00000566811 STK3Q13188 491 aa23.43■■□□□ 1.34
RNF40-210ENST00000566811 ME3Q16798 604 aa23.43■■□□□ 1.34
RNF40-210ENST00000566811 CMTR1Q8N1G2 835 aaKnown RBP23.43■■□□□ 1.34
RNF40-210ENST00000566811 CCDC82Q8N4S0 544 aa23.43■■□□□ 1.34
RNF40-210ENST00000566811 MSL3Q8N5Y2 521 aaKnown RBP23.43■■□□□ 1.34
RNF40-210ENST00000566811 CCDC12Q8WUD4 166 aaPredicted RBP23.43■■□□□ 1.34
RNF40-210ENST00000566811 A1CFQ9NQ94 594 aaKnown RBP23.43■■□□□ 1.34
RNF40-210ENST00000566811 DNAJC25-GNG10A0A024R161 153 aa23.42■■□□□ 1.34
RNF40-210ENST00000566811 PPP1R11O60927 126 aaPredicted RBP23.42■■□□□ 1.34
RNF40-210ENST00000566811 SSRP1Q08945 709 aaKnown RBP23.42■■□□□ 1.34
RNF40-210ENST00000566811 PFKFB3Q16875 520 aaPredicted RBP23.42■■□□□ 1.34
RNF40-210ENST00000566811 ZNF467Q7Z7K2 595 aaPredicted RBP23.42■■□□□ 1.34
RNF40-210ENST00000566811 CLEC4DQ8WXI8 215 aa23.42■■□□□ 1.34
RNF40-210ENST00000566811 GLT8D2Q9H1C3 349 aa23.42■■□□□ 1.34
RNF40-210ENST00000566811 NCOA5Q9HCD5 579 aaKnown RBP23.42■■□□□ 1.34
RNF40-210ENST00000566811 CYP39A1Q9NYL5 469 aa23.42■■□□□ 1.34
RNF40-210ENST00000566811 HTTP42858 3142 aa23.42■■□□□ 1.34
RNF40-210ENST00000566811 SCG2P13521 617 aa23.41■■□□□ 1.34
RNF40-210ENST00000566811 MUM1L1Q5H9M0 696 aa23.41■■□□□ 1.34
RNF40-210ENST00000566811 RNF207Q6ZRF8 634 aa23.41■■□□□ 1.34
RNF40-210ENST00000566811 NOL8Q76FK4 1167 aaKnown RBP23.41■■□□□ 1.34
RNF40-210ENST00000566811 LARP6Q9BRS8 491 aaKnown RBP23.41■■□□□ 1.34
RNF40-210ENST00000566811 GABRQQ9UN88 632 aa23.41■■□□□ 1.34
RNF40-210ENST00000566811 V9GY48 417 aaPredicted RBP23.41■■□□□ 1.34
RNF40-210ENST00000566811 POTEB2H3BUK9 544 aa23.4■■□□□ 1.34
RNF40-210ENST00000566811 NFIBO00712 420 aa23.4■■□□□ 1.34
RNF40-210ENST00000566811 DEXIO95424 95 aa23.4■■□□□ 1.34
RNF40-210ENST00000566811 OLFML2BQ68BL8 750 aa23.4■■□□□ 1.34
RNF40-210ENST00000566811 HEATR3Q7Z4Q2 680 aa23.4■■□□□ 1.34
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms