RNA–Protein interactions for RNA: ENST00000566600.1

NME3-209, Transcript of NME/NM23 nucleoside diphosphate kinase 3, humanhuman

TSL 2

Gene NME3, Length 913 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NME3-209ENST00000566600 PNMA6FA0A0J9YX94 578 aa30.31■■■□□ 2.44
NME3-209ENST00000566600 CCDC196A0A1B0GTZ2 297 aa30.31■■■□□ 2.44
NME3-209ENST00000566600 CYTH3O43739 400 aa30.31■■■□□ 2.44
NME3-209ENST00000566600 USH1GQ495M9 461 aa30.31■■■□□ 2.44
NME3-209ENST00000566600 MUM1L1Q5H9M0 696 aa30.31■■■□□ 2.44
NME3-209ENST00000566600 TMTC3Q6ZXV5 915 aa30.31■■■□□ 2.44
NME3-209ENST00000566600 NPLOC4Q8TAT6 608 aa30.31■■■□□ 2.44
NME3-209ENST00000566600 TRIB2Q92519 343 aa30.31■■■□□ 2.44
NME3-209ENST00000566600 RRP36Q96EU6 259 aaKnown RBP30.31■■■□□ 2.44
NME3-209ENST00000566600 PIGSQ96S52 555 aa30.31■■■□□ 2.44
NME3-209ENST00000566600 C22orf23Q9BZE7 217 aa30.31■■■□□ 2.44
NME3-209ENST00000566600 MAF1Q9H063 256 aa30.31■■■□□ 2.44
NME3-209ENST00000566600 ALDH8A1Q9H2A2 487 aaPredicted RBP30.31■■■□□ 2.44
NME3-209ENST00000566600 PLEKHA8P1O95397 391 aa30.3■■■□□ 2.44
NME3-209ENST00000566600 PGK2P07205 417 aa30.3■■■□□ 2.44
NME3-209ENST00000566600 METAP2P50579 478 aaKnown RBP eCLIP30.3■■■□□ 2.44
NME3-209ENST00000566600 TOB2Q14106 344 aaPredicted RBP30.3■■■□□ 2.44
NME3-209ENST00000566600 SLC35G1Q2M3R5 365 aa30.3■■■□□ 2.44
NME3-209ENST00000566600 OLFML2BQ68BL8 750 aa30.3■■■□□ 2.44
NME3-209ENST00000566600 HOMER1Q86YM7 354 aa30.3■■■□□ 2.44
NME3-209ENST00000566600 SRBD1Q8N5C6 995 aaKnown RBP30.3■■■□□ 2.44
NME3-209ENST00000566600 A1CFQ9NQ94 594 aaKnown RBP30.3■■■□□ 2.44
NME3-209ENST00000566600 MRPL11Q9Y3B7 192 aaKnown RBP30.3■■■□□ 2.44
NME3-209ENST00000566600 MYH6P13533 1939 aa30.3■■■□□ 2.44
NME3-209ENST00000566600 DNAJC25-GNG10A0A024R161 153 aa30.29■■■□□ 2.44
NME3-209ENST00000566600 INHAP05111 366 aa30.29■■■□□ 2.44
NME3-209ENST00000566600 ANKRD1Q15327 319 aa30.29■■■□□ 2.44
NME3-209ENST00000566600 CCL14Q16627 93 aa30.29■■■□□ 2.44
NME3-209ENST00000566600 ZNF792Q3KQV3 632 aa30.29■■■□□ 2.44
NME3-209ENST00000566600 MFSD14CQ5VZR4 134 aa30.29■■■□□ 2.44
NME3-209ENST00000566600 SEC63Q9UGP8 760 aaKnown RBP30.29■■■□□ 2.44
NME3-209ENST00000566600 NSMFQ6X4W1 530 aa30.28■■■□□ 2.44
NME3-209ENST00000566600 CLEC4DQ8WXI8 215 aa30.28■■■□□ 2.44
NME3-209ENST00000566600 MAML3Q96JK9 1138 aa30.28■■■□□ 2.44
NME3-209ENST00000566600 NID2Q14112 1375 aa30.28■■■□□ 2.44
NME3-209ENST00000566600 CCDC85CA6NKD9 419 aa30.27■■■□□ 2.44
NME3-209ENST00000566600 POTEB2H3BUK9 544 aa30.27■■■□□ 2.44
NME3-209ENST00000566600 RBM25P49756 843 aaKnown RBP30.27■■■□□ 2.44
NME3-209ENST00000566600 RGS22Q8NE09 1264 aa30.27■■■□□ 2.44
NME3-209ENST00000566600 ZNF274Q96GC6 653 aaPredicted RBP30.27■■■□□ 2.44
NME3-209ENST00000566600 PCDHA1Q9Y5I3 950 aa30.27■■■□□ 2.44
NME3-209ENST00000566600 NFIBO00712 420 aa30.26■■■□□ 2.43
NME3-209ENST00000566600 TAL1P17542 331 aaPredicted RBP30.26■■■□□ 2.43
NME3-209ENST00000566600 MCF2L2Q86YR7 1114 aa30.26■■■□□ 2.43
NME3-209ENST00000566600 CMTR1Q8N1G2 835 aaKnown RBP30.26■■■□□ 2.43
NME3-209ENST00000566600 MSL3Q8N5Y2 521 aaKnown RBP30.26■■■□□ 2.43
NME3-209ENST00000566600 CYP39A1Q9NYL5 469 aa30.26■■■□□ 2.43
NME3-209ENST00000566600 BAZ2BQ9UIF8 2168 aaKnown RBP30.25■■■□□ 2.43
NME3-209ENST00000566600 SMCHD1A6NHR9 2005 aa30.25■■■□□ 2.43
NME3-209ENST00000566600 PDIA3P30101 505 aaKnown RBP30.25■■■□□ 2.43
NME3-209ENST00000566600 ZNF467Q7Z7K2 595 aaPredicted RBP30.25■■■□□ 2.43
NME3-209ENST00000566600 TMEM106CQ9BVX2 250 aa30.25■■■□□ 2.43
NME3-209ENST00000566600 FLRT1Q9NZU1 646 aa30.25■■■□□ 2.43
NME3-209ENST00000566600 PLXNA1Q9UIW2 1896 aa30.25■■■□□ 2.43
NME3-209ENST00000566600 PTPDC1A2A3K4 754 aa30.24■■■□□ 2.43
NME3-209ENST00000566600 PPP1R11O60927 126 aaPredicted RBP30.24■■■□□ 2.43
NME3-209ENST00000566600 NEK4P51957 841 aa30.24■■■□□ 2.43
NME3-209ENST00000566600 RNF207Q6ZRF8 634 aa30.24■■■□□ 2.43
NME3-209ENST00000566600 CCDC82Q8N4S0 544 aa30.24■■■□□ 2.43
NME3-209ENST00000566600 FAM133AQ8N9E0 248 aa30.24■■■□□ 2.43
NME3-209ENST00000566600 PIBF1Q8WXW3 757 aa30.24■■■□□ 2.43
NME3-209ENST00000566600 FAM217BQ9NTX9 383 aaPredicted RBP30.24■■■□□ 2.43
NME3-209ENST00000566600 IGHA2P01877 340 aa30.23■■■□□ 2.43
NME3-209ENST00000566600 CCL5P13501 91 aa30.23■■■□□ 2.43
NME3-209ENST00000566600 PRKAR2AP13861 404 aaKnown RBP30.23■■■□□ 2.43
NME3-209ENST00000566600 CDC27P30260 824 aa30.23■■■□□ 2.43
NME3-209ENST00000566600 BAATQ14032 418 aaPredicted RBP30.23■■■□□ 2.43
NME3-209ENST00000566600 MAP3K21Q5TCX8 1036 aa30.23■■■□□ 2.43
NME3-209ENST00000566600 TINF2Q9BSI4 451 aa30.23■■■□□ 2.43
NME3-209ENST00000566600 RPTORQ8N122 1335 aa30.22■■■□□ 2.43
NME3-209ENST00000566600 ADD1P35611 737 aaKnown RBP30.22■■■□□ 2.43
NME3-209ENST00000566600 CACNB2Q08289 660 aaPredicted RBP30.22■■■□□ 2.43
NME3-209ENST00000566600 BACH2Q9BYV9 841 aa30.22■■■□□ 2.43
NME3-209ENST00000566600 HMX1Q9NP08 348 aaPredicted RBP30.22■■■□□ 2.43
NME3-209ENST00000566600 ADD3Q9UEY8 706 aaKnown RBP30.22■■■□□ 2.43
NME3-209ENST00000566600 CNTNAP5Q8WYK1 1306 aa30.22■■■□□ 2.43
NME3-209ENST00000566600 MYCP01106 439 aaPredicted RBP30.21■■■□□ 2.43
NME3-209ENST00000566600 CYP2C19P33261 490 aa30.21■■■□□ 2.43
NME3-209ENST00000566600 AK2P54819 239 aa30.21■■■□□ 2.43
NME3-209ENST00000566600 FUT2Q10981 343 aa30.21■■■□□ 2.43
NME3-209ENST00000566600 TRIM32Q13049 653 aa30.21■■■□□ 2.43
NME3-209ENST00000566600 MTFR1Q15390 333 aa30.21■■■□□ 2.43
NME3-209ENST00000566600 MAMDC4Q6UXC1 1216 aa30.21■■■□□ 2.43
NME3-209ENST00000566600 SAMD3Q8N6K7 520 aa30.21■■■□□ 2.43
NME3-209ENST00000566600 RNF208Q9H0X6 261 aa30.21■■■□□ 2.43
NME3-209ENST00000566600 RPS6P62753 249 aaKnown RBP30.2■■■□□ 2.43
NME3-209ENST00000566600 CNTN2Q02246 1040 aa30.2■■■□□ 2.43
NME3-209ENST00000566600 UNC93B1Q9H1C4 597 aa30.2■■■□□ 2.43
NME3-209ENST00000566600 MAP3K20Q9NYL2 800 aaKnown RBP30.2■■■□□ 2.43
NME3-209ENST00000566600 RBM27Q9P2N5 1060 aaKnown RBP30.2■■■□□ 2.43
NME3-209ENST00000566600 NRBP1Q9UHY1 535 aa30.2■■■□□ 2.43
NME3-209ENST00000566600 SYNGAP1Q96PV0 1343 aa30.2■■■□□ 2.42
NME3-209ENST00000566600 CALML3P27482 149 aa30.19■■■□□ 2.42
NME3-209ENST00000566600 IL27Q8NEV9 243 aa30.19■■■□□ 2.42
NME3-209ENST00000566600 RBBP6Q7Z6E9 1792 aaKnown RBP30.18■■■□□ 2.42
NME3-209ENST00000566600 LOC102724159A0A0B4J2E5 919 aa30.18■■■□□ 2.42
NME3-209ENST00000566600 ASB14A6NK59 587 aa30.18■■■□□ 2.42
NME3-209ENST00000566600 CCT2P78371 535 aaKnown RBP30.18■■■□□ 2.42
NME3-209ENST00000566600 PWP2Q15269 919 aaKnown RBP30.18■■■□□ 2.42
NME3-209ENST00000566600 SLC30A10Q6XR72 485 aa30.18■■■□□ 2.42
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms