RNA–Protein interactions for RNA: ENST00000566333.1

CDH13-208, Transcript of cadherin 13, humanhuman

TSL 2

Gene CDH13, Length 583 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH13-208ENST00000566333 USP6NLQ92738 828 aa9.46□□□□□ -0.9
CDH13-208ENST00000566333 GPKOWQ92917 476 aaPredicted RBP eCLIP9.46□□□□□ -0.9
CDH13-208ENST00000566333 RRP36Q96EU6 259 aaKnown RBP9.46□□□□□ -0.9
CDH13-208ENST00000566333 ERO1AQ96HE7 468 aa9.46□□□□□ -0.9
CDH13-208ENST00000566333 TMX3Q96JJ7 454 aa9.46□□□□□ -0.9
CDH13-208ENST00000566333 RNF26Q9BY78 433 aaPredicted RBP9.46□□□□□ -0.9
CDH13-208ENST00000566333 SLKQ9H2G2 1235 aaPredicted RBP9.46□□□□□ -0.9
CDH13-208ENST00000566333 RNF146Q9NTX7 359 aa9.46□□□□□ -0.9
CDH13-208ENST00000566333 ASTN1O14525 1302 aa9.46□□□□□ -0.9
CDH13-208ENST00000566333 STK36Q9NRP7 1315 aa9.46□□□□□ -0.9
CDH13-208ENST00000566333 DOCK5Q9H7D0 1870 aa9.45□□□□□ -0.9
CDH13-208ENST00000566333 PTPDC1A2A3K4 754 aa9.45□□□□□ -0.9
CDH13-208ENST00000566333 STXBP3O00186 592 aa9.45□□□□□ -0.9
CDH13-208ENST00000566333 TNPO2O14787 897 aaKnown RBP9.45□□□□□ -0.9
CDH13-208ENST00000566333 JAK2O60674 1132 aa9.45□□□□□ -0.9
CDH13-208ENST00000566333 FMNL1O95466 1100 aaPredicted RBP9.45□□□□□ -0.9
CDH13-208ENST00000566333 SLC25A27O95847 323 aa9.45□□□□□ -0.9
CDH13-208ENST00000566333 ALAS1P13196 640 aa9.45□□□□□ -0.9
CDH13-208ENST00000566333 COPB2P35606 906 aa9.45□□□□□ -0.9
CDH13-208ENST00000566333 PSMC4P43686 418 aa9.45□□□□□ -0.9
CDH13-208ENST00000566333 FCGRTP55899 365 aa9.45□□□□□ -0.9
CDH13-208ENST00000566333 GHRHRQ02643 423 aa9.45□□□□□ -0.9
CDH13-208ENST00000566333 PRKCZQ05513 592 aa9.45□□□□□ -0.9
CDH13-208ENST00000566333 PFKFB3Q16875 520 aaPredicted RBP9.45□□□□□ -0.9
CDH13-208ENST00000566333 TKFCQ3LXA3 575 aa9.45□□□□□ -0.9
CDH13-208ENST00000566333 MORN1Q5T089 497 aa9.45□□□□□ -0.9
CDH13-208ENST00000566333 SLC30A10Q6XR72 485 aa9.45□□□□□ -0.9
CDH13-208ENST00000566333 OTOP1Q7RTM1 612 aa9.45□□□□□ -0.9
CDH13-208ENST00000566333 PLEKHH3Q7Z736 793 aa9.45□□□□□ -0.9
CDH13-208ENST00000566333 NCAPG2Q86XI2 1143 aa9.45□□□□□ -0.9
CDH13-208ENST00000566333 FBXO11Q86XK2 927 aa9.45□□□□□ -0.9
CDH13-208ENST00000566333 CCDC83Q8IWF9 413 aa9.45□□□□□ -0.9
CDH13-208ENST00000566333 CHST13Q8NET6 341 aa9.45□□□□□ -0.9
CDH13-208ENST00000566333 FGD4Q96M96 766 aa9.45□□□□□ -0.9
CDH13-208ENST00000566333 TRERF1Q96PN7 1200 aa9.45□□□□□ -0.9
CDH13-208ENST00000566333 AMNQ9BXJ7 453 aa9.45□□□□□ -0.9
CDH13-208ENST00000566333 MROH8Q9H579 483 aa9.45□□□□□ -0.9
CDH13-208ENST00000566333 ACAD9Q9H845 621 aa9.45□□□□□ -0.9
CDH13-208ENST00000566333 A1CFQ9NQ94 594 aaKnown RBP9.45□□□□□ -0.9
CDH13-208ENST00000566333 SH2B1Q9NRF2 756 aaPredicted RBP9.45□□□□□ -0.9
CDH13-208ENST00000566333 SEC63Q9UGP8 760 aaKnown RBP9.45□□□□□ -0.9
CDH13-208ENST00000566333 GABRQQ9UN88 632 aa9.45□□□□□ -0.9
CDH13-208ENST00000566333 ABCB11O95342 1321 aa9.45□□□□□ -0.9
CDH13-208ENST00000566333 KIAA0100Q14667 2235 aaKnown RBP9.45□□□□□ -0.9
CDH13-208ENST00000566333 DNAJC25-GNG10A0A024R161 153 aa9.44□□□□□ -0.9
CDH13-208ENST00000566333 CPLX1O14810 134 aa9.44□□□□□ -0.9
CDH13-208ENST00000566333 PRPF3O43395 683 aaKnown RBP9.44□□□□□ -0.9
CDH13-208ENST00000566333 SCG2P13521 617 aa9.44□□□□□ -0.9
CDH13-208ENST00000566333 FDPSP14324 419 aaKnown RBP9.44□□□□□ -0.9
CDH13-208ENST00000566333 PTPREP23469 700 aa9.44□□□□□ -0.9
CDH13-208ENST00000566333 ADORA2AP29274 412 aa9.44□□□□□ -0.9
CDH13-208ENST00000566333 MCM2P49736 904 aa9.44□□□□□ -0.9
CDH13-208ENST00000566333 HEATR3Q7Z4Q2 680 aa9.44□□□□□ -0.9
CDH13-208ENST00000566333 ABRAQ8N0Z2 381 aa9.44□□□□□ -0.9
CDH13-208ENST00000566333 SMARCC2Q8TAQ2 1214 aa9.44□□□□□ -0.9
CDH13-208ENST00000566333 SOCS4Q8WXH5 440 aa9.44□□□□□ -0.9
CDH13-208ENST00000566333 SNX21Q969T3 373 aa9.44□□□□□ -0.9
CDH13-208ENST00000566333 COA7Q96BR5 231 aa9.44□□□□□ -0.9
CDH13-208ENST00000566333 ZSCAN31Q96LW9 406 aaPredicted RBP9.44□□□□□ -0.9
CDH13-208ENST00000566333 AIFM3Q96NN9 605 aa9.44□□□□□ -0.9
CDH13-208ENST00000566333 SLC26A6Q9BXS9 759 aa9.44□□□□□ -0.9
CDH13-208ENST00000566333 PRDM10Q9NQV6 1147 aa9.44□□□□□ -0.9
CDH13-208ENST00000566333 BARHL2Q9NY43 387 aa9.44□□□□□ -0.9
CDH13-208ENST00000566333 CYP39A1Q9NYL5 469 aa9.44□□□□□ -0.9
CDH13-208ENST00000566333 GJD2Q9UKL4 321 aa9.44□□□□□ -0.9
CDH13-208ENST00000566333 PNMA2Q9UL42 364 aa9.44□□□□□ -0.9
CDH13-208ENST00000566333 CTDP1Q9Y5B0 961 aaPredicted RBP9.44□□□□□ -0.9
CDH13-208ENST00000566333 PCDHA1Q9Y5I3 950 aa9.44□□□□□ -0.9
CDH13-208ENST00000566333 V9GY48 417 aaPredicted RBP9.44□□□□□ -0.9
CDH13-208ENST00000566333 PFASO15067 1338 aa9.43□□□□□ -0.9
CDH13-208ENST00000566333 SLC15A5A6NIM6 579 aa9.43□□□□□ -0.9
CDH13-208ENST00000566333 hCG_1984214I3L0E3 225 aa9.43□□□□□ -0.9
CDH13-208ENST00000566333 K7ELQ4 463 aaPredicted RBP9.43□□□□□ -0.9
CDH13-208ENST00000566333 ADAMTS3O15072 1205 aa9.43□□□□□ -0.9
CDH13-208ENST00000566333 COBLO75128 1261 aa9.43□□□□□ -0.9
CDH13-208ENST00000566333 CDKL5O76039 1030 aa9.43□□□□□ -0.9
CDH13-208ENST00000566333 IGHA2P01877 340 aa9.43□□□□□ -0.9
CDH13-208ENST00000566333 SLC4A3P48751 1232 aa9.43□□□□□ -0.9
CDH13-208ENST00000566333 HSD17B4P51659 736 aa9.43□□□□□ -0.9
CDH13-208ENST00000566333 CUL4AQ13619 759 aa9.43□□□□□ -0.9
CDH13-208ENST00000566333 NPY5RQ15761 445 aa9.43□□□□□ -0.9
CDH13-208ENST00000566333 WDR78Q5VTH9 848 aa9.43□□□□□ -0.9
CDH13-208ENST00000566333 PPP1R18Q6NYC8 613 aa9.43□□□□□ -0.9
CDH13-208ENST00000566333 ZNF713Q8N859 430 aaPredicted RBP9.43□□□□□ -0.9
CDH13-208ENST00000566333 FAM133AQ8N9E0 248 aa9.43□□□□□ -0.9
CDH13-208ENST00000566333 TBC1D5Q92609 795 aa9.43□□□□□ -0.9
CDH13-208ENST00000566333 MMP19Q99542 508 aa9.43□□□□□ -0.9
CDH13-208ENST00000566333 APBA2Q99767 749 aa9.43□□□□□ -0.9
CDH13-208ENST00000566333 COL20A1Q9P218 1284 aa9.43□□□□□ -0.9
CDH13-208ENST00000566333 RBM27Q9P2N5 1060 aaKnown RBP9.43□□□□□ -0.9
CDH13-208ENST00000566333 SRRDQ9UH36 339 aa9.43□□□□□ -0.9
CDH13-208ENST00000566333 FBXO40Q9UH90 709 aa9.43□□□□□ -0.9
CDH13-208ENST00000566333 WDR81Q562E7 1941 aa9.43□□□□□ -0.9
CDH13-208ENST00000566333 FRMPD4Q14CM0 1322 aa9.42□□□□□ -0.9
CDH13-208ENST00000566333 ESYT2A0FGR8 921 aa9.42□□□□□ -0.9
CDH13-208ENST00000566333 STRNO43815 780 aa9.42□□□□□ -0.9
CDH13-208ENST00000566333 DEXIO95424 95 aa9.42□□□□□ -0.9
CDH13-208ENST00000566333 GNRH1P01148 92 aa9.42□□□□□ -0.9
CDH13-208ENST00000566333 PGK2P07205 417 aa9.42□□□□□ -0.9
CDH13-208ENST00000566333 HOXC6P09630 235 aa9.42□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms