RNA–Protein interactions for RNA: ENST00000566286.5

TCF4-232, Transcript of transcription factor 4, humanhuman

TSL 1 (best) BASIC

Gene TCF4, Length 2,119 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-232ENST00000566286 SYNE4Q8N205 404 aa12.28□□□□□ -0.44
TCF4-232ENST00000566286 LCORLQ8N3X6 602 aa12.28□□□□□ -0.44
TCF4-232ENST00000566286 PPM1EQ8WY54 764 aa12.28□□□□□ -0.44
TCF4-232ENST00000566286 THRAP3Q9Y2W1 955 aaKnown RBP12.28□□□□□ -0.44
TCF4-232ENST00000566286 SLIT2O94813 1529 aa12.28□□□□□ -0.44
TCF4-232ENST00000566286 EIF3CLB5ME19 914 aaKnown RBP12.28□□□□□ -0.44
TCF4-232ENST00000566286 RNF225M0QZC1 329 aaPredicted RBP12.28□□□□□ -0.44
TCF4-232ENST00000566286 PRKAB2O43741 272 aa12.28□□□□□ -0.44
TCF4-232ENST00000566286 CALM1P0DP23 149 aa12.28□□□□□ -0.44
TCF4-232ENST00000566286 CALM2P0DP24 149 aa12.28□□□□□ -0.44
TCF4-232ENST00000566286 CALM3P0DP25 149 aa12.28□□□□□ -0.44
TCF4-232ENST00000566286 GPTP24298 496 aa12.28□□□□□ -0.44
TCF4-232ENST00000566286 CDC25AP30304 524 aa12.28□□□□□ -0.44
TCF4-232ENST00000566286 NOP2P46087 812 aaKnown RBP12.28□□□□□ -0.44
TCF4-232ENST00000566286 EARS2Q5JPH6 523 aaKnown RBP12.28□□□□□ -0.44
TCF4-232ENST00000566286 IQCEQ6IPM2 695 aa12.28□□□□□ -0.44
TCF4-232ENST00000566286 PDXDC2PQ6P474 469 aa12.28□□□□□ -0.44
TCF4-232ENST00000566286 CATIPQ7Z7H3 387 aa12.28□□□□□ -0.44
TCF4-232ENST00000566286 METTL3Q86U44 580 aaKnown RBP12.28□□□□□ -0.44
TCF4-232ENST00000566286 COG1Q8WTW3 980 aa12.28□□□□□ -0.44
TCF4-232ENST00000566286 EIF3CQ99613 913 aaKnown RBP12.28□□□□□ -0.44
TCF4-232ENST00000566286 DNAJC7Q99615 494 aa12.28□□□□□ -0.44
TCF4-232ENST00000566286 FAM107BQ9H098 131 aa12.28□□□□□ -0.44
TCF4-232ENST00000566286 ANAPC4Q9UJX5 808 aa12.28□□□□□ -0.44
TCF4-232ENST00000566286 HPCAL4Q9UM19 191 aa12.28□□□□□ -0.44
TCF4-232ENST00000566286 LUC7L2Q9Y383 392 aaKnown RBP12.28□□□□□ -0.44
TCF4-232ENST00000566286 REXO2Q9Y3B8 237 aaKnown RBP12.28□□□□□ -0.44
TCF4-232ENST00000566286 NUTM2BA6NNL0 878 aaPredicted RBP12.27□□□□□ -0.45
TCF4-232ENST00000566286 NUTM2EB1AL46 878 aaPredicted RBP12.27□□□□□ -0.45
TCF4-232ENST00000566286 KRT86O43790 486 aa12.27□□□□□ -0.45
TCF4-232ENST00000566286 TOM1O60784 492 aa12.27□□□□□ -0.45
TCF4-232ENST00000566286 PRPF6O94906 941 aaKnown RBP12.27□□□□□ -0.45
TCF4-232ENST00000566286 SYF2O95926 243 aaKnown RBP12.27□□□□□ -0.45
TCF4-232ENST00000566286 CYP19A1P11511 503 aaPredicted RBP12.27□□□□□ -0.45
TCF4-232ENST00000566286 EEF1GP26641 437 aaKnown RBP12.27□□□□□ -0.45
TCF4-232ENST00000566286 CORO7P57737 925 aa12.27□□□□□ -0.45
TCF4-232ENST00000566286 ZNF174Q15697 407 aa12.27□□□□□ -0.45
TCF4-232ENST00000566286 TTC31Q49AM3 519 aaPredicted RBP12.27□□□□□ -0.45
TCF4-232ENST00000566286 CCDC122Q5T0U0 273 aa12.27□□□□□ -0.45
TCF4-232ENST00000566286 FBXO33Q7Z6M2 555 aa12.27□□□□□ -0.45
TCF4-232ENST00000566286 TNFRSF25Q93038 417 aa12.27□□□□□ -0.45
TCF4-232ENST00000566286 SHISA4Q96DD7 197 aa12.27□□□□□ -0.45
TCF4-232ENST00000566286 CHP1Q99653 195 aa12.27□□□□□ -0.45
TCF4-232ENST00000566286 TRMT112Q9UI30 125 aaKnown RBP12.27□□□□□ -0.45
TCF4-232ENST00000566286 TMA7Q9Y2S6 64 aaKnown RBP12.27□□□□□ -0.45
TCF4-232ENST00000566286 SPATA31A5Q5VU36 1347 aa12.27□□□□□ -0.45
TCF4-232ENST00000566286 SPATA31A7Q8IWB4 1347 aa12.27□□□□□ -0.45
TCF4-232ENST00000566286 ANO9A1A5B4 782 aa12.26□□□□□ -0.45
TCF4-232ENST00000566286 LGALS16A8MUM7 142 aa12.26□□□□□ -0.45
TCF4-232ENST00000566286 FUT2Q10981 343 aa12.26□□□□□ -0.45
TCF4-232ENST00000566286 SEMA3FQ13275 785 aa12.26□□□□□ -0.45
TCF4-232ENST00000566286 STIM1Q13586 685 aa12.26□□□□□ -0.45
TCF4-232ENST00000566286 SPIRE2Q8WWL2 714 aa12.26□□□□□ -0.45
TCF4-232ENST00000566286 SMARCC1Q92922 1105 aaPredicted RBP12.26□□□□□ -0.45
TCF4-232ENST00000566286 CRACR2AQ9BSW2 395 aa12.26□□□□□ -0.45
TCF4-232ENST00000566286 BLZF1Q9H2G9 400 aa12.26□□□□□ -0.45
TCF4-232ENST00000566286 CAPN11Q9UMQ6 739 aa12.26□□□□□ -0.45
TCF4-232ENST00000566286 TTC26A0AVF1 554 aa12.26□□□□□ -0.45
TCF4-232ENST00000566286 IPO7O95373 1038 aaKnown RBP12.26□□□□□ -0.45
TCF4-232ENST00000566286 RPN1P04843 607 aaKnown RBP12.26□□□□□ -0.45
TCF4-232ENST00000566286 CYLC1P35663 651 aaPredicted RBP12.26□□□□□ -0.45
TCF4-232ENST00000566286 DDB1Q16531 1140 aa12.26□□□□□ -0.45
TCF4-232ENST00000566286 HLFQ16534 295 aa12.26□□□□□ -0.45
TCF4-232ENST00000566286 DNAJC21Q5F1R6 531 aaKnown RBP12.26□□□□□ -0.45
TCF4-232ENST00000566286 CCDC70Q6NSX1 233 aa12.26□□□□□ -0.45
TCF4-232ENST00000566286 FOXR1Q6PIV2 292 aa12.26□□□□□ -0.45
TCF4-232ENST00000566286 EFCAB13Q8IY85 973 aa12.26□□□□□ -0.45
TCF4-232ENST00000566286 MB21D1Q8N884 522 aa12.26□□□□□ -0.45
TCF4-232ENST00000566286 STAMQ92783 540 aa12.26□□□□□ -0.45
TCF4-232ENST00000566286 VTI1AQ96AJ9 217 aa12.26□□□□□ -0.45
TCF4-232ENST00000566286 L3MBTL3Q96JM7 780 aaPredicted RBP12.26□□□□□ -0.45
TCF4-232ENST00000566286 ZSCAN10Q96SZ4 725 aaPredicted RBP12.26□□□□□ -0.45
TCF4-232ENST00000566286 V9GY48 417 aaPredicted RBP12.26□□□□□ -0.45
TCF4-232ENST00000566286 ENC1O14682 589 aa12.25□□□□□ -0.45
TCF4-232ENST00000566286 ATP1A1P05023 1023 aaKnown RBP12.25□□□□□ -0.45
TCF4-232ENST00000566286 PARP1P09874 1014 aaKnown RBP12.25□□□□□ -0.45
TCF4-232ENST00000566286 IFIT1BQ5T764 474 aaKnown RBP12.25□□□□□ -0.45
TCF4-232ENST00000566286 ARL6IP4Q66PJ3 421 aaKnown RBP12.25□□□□□ -0.45
TCF4-232ENST00000566286 KIAA1328Q86T90 577 aa12.25□□□□□ -0.45
TCF4-232ENST00000566286 ENAHQ8N8S7 591 aaPredicted RBP12.25□□□□□ -0.45
TCF4-232ENST00000566286 RUBCNQ92622 972 aa12.25□□□□□ -0.45
TCF4-232ENST00000566286 MMS19Q96T76 1030 aa12.25□□□□□ -0.45
TCF4-232ENST00000566286 TANGO6Q9C0B7 1094 aa12.25□□□□□ -0.45
TCF4-232ENST00000566286 PDS5AQ29RF7 1337 aaKnown RBP12.25□□□□□ -0.45
TCF4-232ENST00000566286 DLEC1Q9Y238 1755 aa12.25□□□□□ -0.45
TCF4-232ENST00000566286 PRDM1O75626 825 aa12.25□□□□□ -0.45
TCF4-232ENST00000566286 DDAH1O94760 285 aa12.25□□□□□ -0.45
TCF4-232ENST00000566286 PCP11498 1178 aaKnown RBP12.25□□□□□ -0.45
TCF4-232ENST00000566286 LONP1P36776 959 aaKnown RBP12.25□□□□□ -0.45
TCF4-232ENST00000566286 HERVK_113P62684 666 aa12.25□□□□□ -0.45
TCF4-232ENST00000566286 MEA1Q16626 185 aa12.25□□□□□ -0.45
TCF4-232ENST00000566286 IQCA1Q86XH1 822 aa12.25□□□□□ -0.45
TCF4-232ENST00000566286 EXOC8Q8IYI6 725 aa12.25□□□□□ -0.45
TCF4-232ENST00000566286 CCDC170Q8IYT3 715 aa12.25□□□□□ -0.45
TCF4-232ENST00000566286 HELBQ8NG08 1087 aaPredicted RBP12.25□□□□□ -0.45
TCF4-232ENST00000566286 TMC2Q8TDI7 906 aa12.25□□□□□ -0.45
TCF4-232ENST00000566286 NOC3LQ8WTT2 800 aaKnown RBP12.25□□□□□ -0.45
TCF4-232ENST00000566286 JAKMIP2Q96AA8 810 aa12.25□□□□□ -0.45
TCF4-232ENST00000566286 NUP58Q9BVL2 599 aa12.25□□□□□ -0.45
TCF4-232ENST00000566286 THAP9Q9H5L6 903 aa12.25□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms