RNA–Protein interactions for RNA: ENST00000565887.1

SHCBP1-204, Transcript of SHC binding and spindle associated 1, humanhuman

TSL 5

Gene SHCBP1, Length 603 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHCBP1-204ENST00000565887 METAP2P50579 478 aaKnown RBP eCLIP14.59□□□□□ -0.07
SHCBP1-204ENST00000565887 MRPL12P52815 198 aaKnown RBP14.59□□□□□ -0.07
SHCBP1-204ENST00000565887 SNAP25P60880 206 aa14.59□□□□□ -0.07
SHCBP1-204ENST00000565887 COL9A3Q14050 684 aaPredicted RBP14.59□□□□□ -0.07
SHCBP1-204ENST00000565887 QRICH1Q2TAL8 776 aa14.59□□□□□ -0.07
SHCBP1-204ENST00000565887 MICU3Q86XE3 530 aa14.59□□□□□ -0.07
SHCBP1-204ENST00000565887 TEX2Q8IWB9 1127 aa14.59□□□□□ -0.07
SHCBP1-204ENST00000565887 MYL10Q9BUA6 226 aa14.59□□□□□ -0.07
SHCBP1-204ENST00000565887 TMEM106CQ9BVX2 250 aa14.59□□□□□ -0.07
SHCBP1-204ENST00000565887 HOMER2Q9NSB8 354 aa14.59□□□□□ -0.07
SHCBP1-204ENST00000565887 RBM27Q9P2N5 1060 aaKnown RBP14.59□□□□□ -0.07
SHCBP1-204ENST00000565887 NRBP1Q9UHY1 535 aa14.59□□□□□ -0.07
SHCBP1-204ENST00000565887 BRPF3Q9ULD4 1205 aa14.59□□□□□ -0.07
SHCBP1-204ENST00000565887 NAP1L2Q9ULW6 460 aaPredicted RBP14.59□□□□□ -0.07
SHCBP1-204ENST00000565887 GOLGA8AA7E2F4 631 aa14.58□□□□□ -0.08
SHCBP1-204ENST00000565887 GOLGA8BA8MQT2 603 aa14.58□□□□□ -0.08
SHCBP1-204ENST00000565887 POTEB2H3BUK9 544 aa14.58□□□□□ -0.08
SHCBP1-204ENST00000565887 COBLO75128 1261 aa14.58□□□□□ -0.08
SHCBP1-204ENST00000565887 APOBRQ0VD83 1088 aa14.58□□□□□ -0.08
SHCBP1-204ENST00000565887 ZNF792Q3KQV3 632 aa14.58□□□□□ -0.08
SHCBP1-204ENST00000565887 CPLX2Q6PUV4 134 aaKnown RBP14.58□□□□□ -0.08
SHCBP1-204ENST00000565887 TMTC3Q6ZXV5 915 aa14.58□□□□□ -0.08
SHCBP1-204ENST00000565887 ZNF333Q96JL9 665 aa14.58□□□□□ -0.08
SHCBP1-204ENST00000565887 MPHOSPH6Q99547 160 aaKnown RBP14.58□□□□□ -0.08
SHCBP1-204ENST00000565887 UPF3BQ9BZI7 483 aaKnown RBP14.58□□□□□ -0.08
SHCBP1-204ENST00000565887 CPVLQ9H3G5 476 aa14.58□□□□□ -0.08
SHCBP1-204ENST00000565887 ADD3Q9UEY8 706 aaKnown RBP14.58□□□□□ -0.08
SHCBP1-204ENST00000565887 PCDHA1Q9Y5I3 950 aa14.58□□□□□ -0.08
SHCBP1-204ENST00000565887 ZNFX1Q9P2E3 1918 aaKnown RBP14.57□□□□□ -0.08
SHCBP1-204ENST00000565887 CYTH3O43739 400 aa14.57□□□□□ -0.08
SHCBP1-204ENST00000565887 PDIA3P30101 505 aaKnown RBP14.57□□□□□ -0.08
SHCBP1-204ENST00000565887 NEK4P51957 841 aa14.57□□□□□ -0.08
SHCBP1-204ENST00000565887 SRBD1Q8N5C6 995 aaKnown RBP14.57□□□□□ -0.08
SHCBP1-204ENST00000565887 SH3TC2Q8TF17 1288 aa14.57□□□□□ -0.08
SHCBP1-204ENST00000565887 MAML3Q96JK9 1138 aa14.57□□□□□ -0.08
SHCBP1-204ENST00000565887 PIGSQ96S52 555 aa14.57□□□□□ -0.08
SHCBP1-204ENST00000565887 HMX1Q9NP08 348 aaPredicted RBP14.57□□□□□ -0.08
SHCBP1-204ENST00000565887 A1CFQ9NQ94 594 aaKnown RBP14.57□□□□□ -0.08
SHCBP1-204ENST00000565887 CYP39A1Q9NYL5 469 aa14.57□□□□□ -0.08
SHCBP1-204ENST00000565887 RPTORQ8N122 1335 aa14.57□□□□□ -0.08
SHCBP1-204ENST00000565887 ZNF236Q9UL36 1845 aa14.57□□□□□ -0.08
SHCBP1-204ENST00000565887 ASB14A6NK59 587 aa14.56□□□□□ -0.08
SHCBP1-204ENST00000565887 CCDC85CA6NKD9 419 aa14.56□□□□□ -0.08
SHCBP1-204ENST00000565887 hCG_1984214I3L0E3 225 aa14.56□□□□□ -0.08
SHCBP1-204ENST00000565887 INHAP05111 366 aa14.56□□□□□ -0.08
SHCBP1-204ENST00000565887 ELNP15502 786 aa14.56□□□□□ -0.08
SHCBP1-204ENST00000565887 RXRAP19793 462 aa14.56□□□□□ -0.08
SHCBP1-204ENST00000565887 AKAP17AQ02040 695 aaKnown RBP14.56□□□□□ -0.08
SHCBP1-204ENST00000565887 TOB2Q14106 344 aaPredicted RBP14.56□□□□□ -0.08
SHCBP1-204ENST00000565887 USH1GQ495M9 461 aa14.56□□□□□ -0.08
SHCBP1-204ENST00000565887 MUM1L1Q5H9M0 696 aa14.56□□□□□ -0.08
SHCBP1-204ENST00000565887 MAMDC4Q6UXC1 1216 aa14.56□□□□□ -0.08
SHCBP1-204ENST00000565887 NSMFQ6X4W1 530 aa14.56□□□□□ -0.08
SHCBP1-204ENST00000565887 RNF207Q6ZRF8 634 aa14.56□□□□□ -0.08
SHCBP1-204ENST00000565887 HOMER1Q86YM7 354 aa14.56□□□□□ -0.08
SHCBP1-204ENST00000565887 CCDC144CPQ8IYA2 1237 aa14.56□□□□□ -0.08
SHCBP1-204ENST00000565887 ZNF713Q8N859 430 aaPredicted RBP14.56□□□□□ -0.08
SHCBP1-204ENST00000565887 DNERQ8NFT8 737 aa14.56□□□□□ -0.08
SHCBP1-204ENST00000565887 NPLOC4Q8TAT6 608 aa14.56□□□□□ -0.08
SHCBP1-204ENST00000565887 CLEC4DQ8WXI8 215 aa14.56□□□□□ -0.08
SHCBP1-204ENST00000565887 TRIB2Q92519 343 aa14.56□□□□□ -0.08
SHCBP1-204ENST00000565887 TINF2Q9BSI4 451 aa14.56□□□□□ -0.08
SHCBP1-204ENST00000565887 SYNGAP1Q96PV0 1343 aa14.56□□□□□ -0.08
SHCBP1-204ENST00000565887 NID2Q14112 1375 aa14.56□□□□□ -0.08
SHCBP1-204ENST00000565887 ZSWIM8A7E2V4 1837 aa14.55□□□□□ -0.08
SHCBP1-204ENST00000565887 PTPDC1A2A3K4 754 aa14.55□□□□□ -0.08
SHCBP1-204ENST00000565887 MSCO60682 206 aa14.55□□□□□ -0.08
SHCBP1-204ENST00000565887 IGHA2P01877 340 aa14.55□□□□□ -0.08
SHCBP1-204ENST00000565887 PGK2P07205 417 aa14.55□□□□□ -0.08
SHCBP1-204ENST00000565887 BAATQ14032 418 aaPredicted RBP14.55□□□□□ -0.08
SHCBP1-204ENST00000565887 MAP3K21Q5TCX8 1036 aa14.55□□□□□ -0.08
SHCBP1-204ENST00000565887 FAM133AQ8N9E0 248 aa14.55□□□□□ -0.08
SHCBP1-204ENST00000565887 BACH2Q9BYV9 841 aa14.55□□□□□ -0.08
SHCBP1-204ENST00000565887 RNF208Q9H0X6 261 aa14.55□□□□□ -0.08
SHCBP1-204ENST00000565887 GLT8D2Q9H1C3 349 aa14.55□□□□□ -0.08
SHCBP1-204ENST00000565887 PLXNB2O15031 1838 aa14.55□□□□□ -0.08
SHCBP1-204ENST00000565887 CPLX1O14810 134 aa14.54□□□□□ -0.08
SHCBP1-204ENST00000565887 CDKL5O76039 1030 aa14.54□□□□□ -0.08
SHCBP1-204ENST00000565887 PLEKHA8P1O95397 391 aa14.54□□□□□ -0.08
SHCBP1-204ENST00000565887 ADD1P35611 737 aaKnown RBP14.54□□□□□ -0.08
SHCBP1-204ENST00000565887 GHRHRQ02643 423 aa14.54□□□□□ -0.08
SHCBP1-204ENST00000565887 CACNB2Q08289 660 aaPredicted RBP14.54□□□□□ -0.08
SHCBP1-204ENST00000565887 RABEP1Q15276 862 aa14.54□□□□□ -0.08
SHCBP1-204ENST00000565887 CCDC82Q8N4S0 544 aa14.54□□□□□ -0.08
SHCBP1-204ENST00000565887 SLKQ9H2G2 1235 aaPredicted RBP14.54□□□□□ -0.08
SHCBP1-204ENST00000565887 FAM217BQ9NTX9 383 aaPredicted RBP14.54□□□□□ -0.08
SHCBP1-204ENST00000565887 CNPY2Q9Y2B0 182 aa14.54□□□□□ -0.08
SHCBP1-204ENST00000565887 V9GY48 417 aaPredicted RBP14.54□□□□□ -0.08
SHCBP1-204ENST00000565887 BAZ2BQ9UIF8 2168 aaKnown RBP14.53□□□□□ -0.08
SHCBP1-204ENST00000565887 MYH6P13533 1939 aa14.53□□□□□ -0.08
SHCBP1-204ENST00000565887 NFIBO00712 420 aa14.53□□□□□ -0.08
SHCBP1-204ENST00000565887 PRPF3O43395 683 aaKnown RBP14.53□□□□□ -0.08
SHCBP1-204ENST00000565887 GJB1P08034 283 aa14.53□□□□□ -0.08
SHCBP1-204ENST00000565887 CCL5P13501 91 aa14.53□□□□□ -0.08
SHCBP1-204ENST00000565887 PRKAR2AP13861 404 aaKnown RBP14.53□□□□□ -0.08
SHCBP1-204ENST00000565887 IFNAR1P17181 557 aa14.53□□□□□ -0.08
SHCBP1-204ENST00000565887 CDC27P30260 824 aa14.53□□□□□ -0.08
SHCBP1-204ENST00000565887 RPS6P62753 249 aaKnown RBP14.53□□□□□ -0.08
SHCBP1-204ENST00000565887 FUT2Q10981 343 aa14.53□□□□□ -0.08
SHCBP1-204ENST00000565887 CCL14Q16627 93 aa14.53□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 11.7 ms