RNA–Protein interactions for RNA: ENST00000565803.1

CHD9-216, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 5

Gene CHD9, Length 3,625 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-216ENST00000565803 USPL1Q5W0Q7 1092 aa3.51□□□□□ -1.85
CHD9-216ENST00000565803 SWSAP1Q6NVH7 229 aa3.51□□□□□ -1.85
CHD9-216ENST00000565803 KRT77Q7Z794 578 aa3.51□□□□□ -1.85
CHD9-216ENST00000565803 TRPM4Q8TD43 1214 aa3.51□□□□□ -1.85
CHD9-216ENST00000565803 SMARCC1Q92922 1105 aaPredicted RBP3.51□□□□□ -1.85
CHD9-216ENST00000565803 TBC1D20Q96BZ9 403 aa3.51□□□□□ -1.85
CHD9-216ENST00000565803 ZMAT2Q96NC0 199 aaKnown RBP3.51□□□□□ -1.85
CHD9-216ENST00000565803 MAP3K14Q99558 947 aa3.51□□□□□ -1.85
CHD9-216ENST00000565803 CCDC94Q9BW85 323 aaPredicted RBP3.51□□□□□ -1.85
CHD9-216ENST00000565803 NUCKS1Q9H1E3 243 aaKnown RBP3.51□□□□□ -1.85
CHD9-216ENST00000565803 MAPK8IP1Q9UQF2 711 aa3.51□□□□□ -1.85
CHD9-216ENST00000565803 IPPQ9Y573 584 aa3.51□□□□□ -1.85
CHD9-216ENST00000565803 IGSF1Q8N6C5 1336 aa3.51□□□□□ -1.85
CHD9-216ENST00000565803 SYNRGQ9UMZ2 1314 aa3.51□□□□□ -1.85
CHD9-216ENST00000565803 LRRC10BA6NIK2 292 aa3.51□□□□□ -1.85
CHD9-216ENST00000565803 GPR182O15218 404 aa3.51□□□□□ -1.85
CHD9-216ENST00000565803 ABCD1P33897 745 aa3.51□□□□□ -1.85
CHD9-216ENST00000565803 MAP2K2P36507 400 aa3.51□□□□□ -1.85
CHD9-216ENST00000565803 EIF1AXP47813 144 aaKnown RBP3.51□□□□□ -1.85
CHD9-216ENST00000565803 TMED1Q13445 227 aa3.51□□□□□ -1.85
CHD9-216ENST00000565803 MTMR2Q13614 643 aa3.51□□□□□ -1.85
CHD9-216ENST00000565803 CCNG2Q16589 344 aa3.51□□□□□ -1.85
CHD9-216ENST00000565803 XRRA1Q6P2D8 792 aa3.51□□□□□ -1.85
CHD9-216ENST00000565803 ATCAYQ86WG3 371 aa3.51□□□□□ -1.85
CHD9-216ENST00000565803 FAM186BQ8IYM0 893 aa3.51□□□□□ -1.85
CHD9-216ENST00000565803 NBPF15Q8N660 670 aa3.51□□□□□ -1.85
CHD9-216ENST00000565803 MARCH10Q8NA82 808 aaPredicted RBP3.51□□□□□ -1.85
CHD9-216ENST00000565803 MKL1Q969V6 931 aa3.51□□□□□ -1.85
CHD9-216ENST00000565803 RBCK1Q9BYM8 510 aa3.51□□□□□ -1.85
CHD9-216ENST00000565803 DBNDD1Q9H9R9 158 aa3.51□□□□□ -1.85
CHD9-216ENST00000565803 UBAP1Q9NZ09 502 aa3.51□□□□□ -1.85
CHD9-216ENST00000565803 C6orf203Q9P0P8 240 aaPredicted RBP3.51□□□□□ -1.85
CHD9-216ENST00000565803 SEPT9Q9UHD8 586 aaPredicted RBP3.51□□□□□ -1.85
CHD9-216ENST00000565803 PTCH2Q9Y6C5 1203 aa3.51□□□□□ -1.85
CHD9-216ENST00000565803 RTCAO00442 366 aaKnown RBP3.51□□□□□ -1.85
CHD9-216ENST00000565803 APOA4P06727 396 aa3.51□□□□□ -1.85
CHD9-216ENST00000565803 JUNDP17535 347 aa3.51□□□□□ -1.85
CHD9-216ENST00000565803 GRK2P25098 689 aa3.51□□□□□ -1.85
CHD9-216ENST00000565803 AIMP1Q12904 312 aaKnown RBP3.51□□□□□ -1.85
CHD9-216ENST00000565803 IFT88Q13099 833 aa3.51□□□□□ -1.85
CHD9-216ENST00000565803 SERINC3Q13530 473 aa3.51□□□□□ -1.85
CHD9-216ENST00000565803 MTMR1Q13613 665 aa3.51□□□□□ -1.85
CHD9-216ENST00000565803 PSMD6Q15008 389 aa3.51□□□□□ -1.85
CHD9-216ENST00000565803 WDR43Q15061 677 aaKnown RBP eCLIP3.51□□□□□ -1.85
CHD9-216ENST00000565803 PDCD2Q16342 344 aaPredicted RBP3.51□□□□□ -1.85
CHD9-216ENST00000565803 PKN2Q16513 984 aaKnown RBP3.51□□□□□ -1.85
CHD9-216ENST00000565803 PTPRNQ16849 979 aa3.51□□□□□ -1.85
CHD9-216ENST00000565803 WDR45BQ5MNZ6 344 aa3.51□□□□□ -1.85
CHD9-216ENST00000565803 ALG1LQ6GMV1 187 aa3.51□□□□□ -1.85
CHD9-216ENST00000565803 PNMA8AQ86V59 439 aaPredicted RBP3.51□□□□□ -1.85
CHD9-216ENST00000565803 RASSF8Q8NHQ8 419 aa3.51□□□□□ -1.85
CHD9-216ENST00000565803 NSUN6Q8TEA1 469 aaKnown RBP3.51□□□□□ -1.85
CHD9-216ENST00000565803 LRCH3Q96II8 777 aa3.51□□□□□ -1.85
CHD9-216ENST00000565803 PURBQ96QR8 312 aaKnown RBP3.51□□□□□ -1.85
CHD9-216ENST00000565803 FERD3LQ96RJ6 166 aa3.51□□□□□ -1.85
CHD9-216ENST00000565803 C1QTNF2Q9BXJ5 285 aa3.51□□□□□ -1.85
CHD9-216ENST00000565803 CFHR5Q9BXR6 569 aa3.51□□□□□ -1.85
CHD9-216ENST00000565803 RANBP17Q9H2T7 1088 aaKnown RBP3.51□□□□□ -1.85
CHD9-216ENST00000565803 TSPY26PQ9H489 355 aa3.51□□□□□ -1.85
CHD9-216ENST00000565803 NMRK2Q9NPI5 230 aa3.51□□□□□ -1.85
CHD9-216ENST00000565803 LUC7LQ9NQ29 371 aaKnown RBP3.51□□□□□ -1.85
CHD9-216ENST00000565803 GINM1Q9NU53 330 aa3.51□□□□□ -1.85
CHD9-216ENST00000565803 CHCHD3Q9NX63 227 aaKnown RBP3.51□□□□□ -1.85
CHD9-216ENST00000565803 V9GYY5 206 aaPredicted RBP3.51□□□□□ -1.85
CHD9-216ENST00000565803 POTECB2RU33 542 aa3.5□□□□□ -1.85
CHD9-216ENST00000565803 IPO7O95373 1038 aaKnown RBP3.5□□□□□ -1.85
CHD9-216ENST00000565803 SLC4A1P02730 911 aa3.5□□□□□ -1.85
CHD9-216ENST00000565803 FUT2Q10981 343 aa3.5□□□□□ -1.85
CHD9-216ENST00000565803 LARP7Q4G0J3 582 aaKnown RBP eCLIP3.5□□□□□ -1.85
CHD9-216ENST00000565803 PERM1Q5SV97 790 aa3.5□□□□□ -1.85
CHD9-216ENST00000565803 SH3RF1Q7Z6J0 888 aa3.5□□□□□ -1.85
CHD9-216ENST00000565803 C11orf74Q86VG3 221 aa3.5□□□□□ -1.85
CHD9-216ENST00000565803 PJA1Q8NG27 643 aa3.5□□□□□ -1.85
CHD9-216ENST00000565803 AFAP1L1Q8TED9 768 aa3.5□□□□□ -1.85
CHD9-216ENST00000565803 COG1Q8WTW3 980 aa3.5□□□□□ -1.85
CHD9-216ENST00000565803 SPATA17Q96L03 361 aa3.5□□□□□ -1.85
CHD9-216ENST00000565803 SRA1Q9HD15 236 aaKnown RBP3.5□□□□□ -1.85
CHD9-216ENST00000565803 PRDM11Q9NQV5 511 aa3.5□□□□□ -1.85
CHD9-216ENST00000565803 COMMD8Q9NX08 183 aa3.5□□□□□ -1.85
CHD9-216ENST00000565803 OBP2AQ9NY56 170 aa3.5□□□□□ -1.85
CHD9-216ENST00000565803 SLC5A4Q9NY91 659 aa3.5□□□□□ -1.85
CHD9-216ENST00000565803 SEL1LQ9UBV2 794 aa3.5□□□□□ -1.85
CHD9-216ENST00000565803 PPT2Q9UMR5 302 aa3.5□□□□□ -1.85
CHD9-216ENST00000565803 SLC27A5Q9Y2P5 690 aa3.5□□□□□ -1.85
CHD9-216ENST00000565803 ANGPTL3Q9Y5C1 460 aa3.5□□□□□ -1.85
CHD9-216ENST00000565803 COL3A1P02461 1466 aaPredicted RBP3.5□□□□□ -1.85
CHD9-216ENST00000565803 F8W031 263 aaPredicted RBP3.5□□□□□ -1.85
CHD9-216ENST00000565803 H3BRJ5 948 aa3.5□□□□□ -1.85
CHD9-216ENST00000565803 PER1O15534 1290 aaPredicted RBP3.5□□□□□ -1.85
CHD9-216ENST00000565803 SART1O43290 800 aaKnown RBP3.5□□□□□ -1.85
CHD9-216ENST00000565803 MYBL2P10244 700 aa3.5□□□□□ -1.85
CHD9-216ENST00000565803 PF4V1P10720 104 aa3.5□□□□□ -1.85
CHD9-216ENST00000565803 SERPINB3P29508 390 aa3.5□□□□□ -1.85
CHD9-216ENST00000565803 UBA7P41226 1012 aa3.5□□□□□ -1.85
CHD9-216ENST00000565803 TNNT3P45378 269 aaPredicted RBP3.5□□□□□ -1.85
CHD9-216ENST00000565803 PDE6CP51160 858 aa3.5□□□□□ -1.85
CHD9-216ENST00000565803 NEK4P51957 841 aa3.5□□□□□ -1.85
CHD9-216ENST00000565803 HSD17B7P56937 341 aa3.5□□□□□ -1.85
CHD9-216ENST00000565803 ATP13A4Q4VNC1 1196 aa3.5□□□□□ -1.85
CHD9-216ENST00000565803 ANKRD45Q5TZF3 282 aa3.5□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms