RNA–Protein interactions for RNA: ENST00000565503.5

RPUSD1-206, Transcript of RNA pseudouridylate synthase domain containing 1, humanhuman

TSL 3

Gene RPUSD1, Length 561 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPUSD1-206ENST00000565503 ZEB2O60315 1214 aa25.38■■□□□ 1.65
RPUSD1-206ENST00000565503 PDE4BQ07343 736 aa25.38■■□□□ 1.65
RPUSD1-206ENST00000565503 FSCN1Q16658 493 aaKnown RBP25.38■■□□□ 1.65
RPUSD1-206ENST00000565503 LRRFIP1Q32MZ4 808 aaKnown RBP25.38■■□□□ 1.65
RPUSD1-206ENST00000565503 IFNL3Q8IZI9 196 aa25.38■■□□□ 1.65
RPUSD1-206ENST00000565503 STAG1Q8WVM7 1258 aa25.38■■□□□ 1.65
RPUSD1-206ENST00000565503 PPM1EQ8WY54 764 aa25.38■■□□□ 1.65
RPUSD1-206ENST00000565503 NACAP1Q9BZK3 213 aa25.38■■□□□ 1.65
RPUSD1-206ENST00000565503 AP5M1Q9H0R1 490 aa25.38■■□□□ 1.65
RPUSD1-206ENST00000565503 CXXC1Q9P0U4 656 aaPredicted RBP25.38■■□□□ 1.65
RPUSD1-206ENST00000565503 TRANK1O15050 2925 aa25.38■■□□□ 1.65
RPUSD1-206ENST00000565503 ZNF536O15090 1300 aa25.37■■□□□ 1.65
RPUSD1-206ENST00000565503 SOWAHBA6NEL2 793 aa25.37■■□□□ 1.65
RPUSD1-206ENST00000565503 M0R2C6 588 aa25.37■■□□□ 1.65
RPUSD1-206ENST00000565503 PLA2G6O60733 806 aa25.37■■□□□ 1.65
RPUSD1-206ENST00000565503 SLC3A2P08195 630 aaKnown RBP25.37■■□□□ 1.65
RPUSD1-206ENST00000565503 ITGA7Q13683 1181 aa25.37■■□□□ 1.65
RPUSD1-206ENST00000565503 PPP4R3BQ5MIZ7 849 aa25.37■■□□□ 1.65
RPUSD1-206ENST00000565503 AGBL1Q96MI9 1066 aa25.37■■□□□ 1.65
RPUSD1-206ENST00000565503 ASB2Q96Q27 587 aa25.37■■□□□ 1.65
RPUSD1-206ENST00000565503 Q9Y3F1 56 aa25.37■■□□□ 1.65
RPUSD1-206ENST00000565503 REV3LO60673 3130 aa25.36■■□□□ 1.65
RPUSD1-206ENST00000565503 ADGRE1Q14246 886 aa25.36■■□□□ 1.65
RPUSD1-206ENST00000565503 MIER1Q8N108 512 aa25.36■■□□□ 1.65
RPUSD1-206ENST00000565503 TRERF1Q96PN7 1200 aa25.36■■□□□ 1.65
RPUSD1-206ENST00000565503 SLC28A3Q9HAS3 691 aa25.36■■□□□ 1.65
RPUSD1-206ENST00000565503 ISY1Q9ULR0 285 aaKnown RBP25.36■■□□□ 1.65
RPUSD1-206ENST00000565503 SLC1A4P43007 532 aa25.35■■□□□ 1.65
RPUSD1-206ENST00000565503 MRPS5P82675 430 aaKnown RBP25.35■■□□□ 1.65
RPUSD1-206ENST00000565503 TFAP4Q01664 338 aa25.35■■□□□ 1.65
RPUSD1-206ENST00000565503 IKQ13123 557 aaPredicted RBP25.35■■□□□ 1.65
RPUSD1-206ENST00000565503 IQSEC1Q6DN90 963 aa25.35■■□□□ 1.65
RPUSD1-206ENST00000565503 NOC4LQ9BVI4 516 aaKnown RBP25.35■■□□□ 1.65
RPUSD1-206ENST00000565503 NKX2-4Q9H2Z4 354 aa25.35■■□□□ 1.65
RPUSD1-206ENST00000565503 GRIN2DO15399 1336 aa25.35■■□□□ 1.65
RPUSD1-206ENST00000565503 SMPD1P17405 629 aa25.34■■□□□ 1.65
RPUSD1-206ENST00000565503 UMODL1Q5DID0 1318 aa25.34■■□□□ 1.65
RPUSD1-206ENST00000565503 DYNC1LI2O43237 492 aaPredicted RBP25.33■■□□□ 1.65
RPUSD1-206ENST00000565503 ALAS1P13196 640 aa25.33■■□□□ 1.65
RPUSD1-206ENST00000565503 IGFBP4P22692 258 aa25.33■■□□□ 1.65
RPUSD1-206ENST00000565503 TSHZ3Q63HK5 1081 aa25.33■■□□□ 1.65
RPUSD1-206ENST00000565503 OTOP2Q7RTS6 562 aa25.33■■□□□ 1.65
RPUSD1-206ENST00000565503 RPUSD2Q8IZ73 545 aaKnown RBP25.33■■□□□ 1.65
RPUSD1-206ENST00000565503 DCTPP1Q9H773 170 aa25.33■■□□□ 1.65
RPUSD1-206ENST00000565503 CYP39A1Q9NYL5 469 aa25.33■■□□□ 1.65
RPUSD1-206ENST00000565503 YBX2Q9Y2T7 364 aaKnown RBP25.33■■□□□ 1.65
RPUSD1-206ENST00000565503 COL9A1P20849 921 aa25.32■■□□□ 1.64
RPUSD1-206ENST00000565503 MCCP23508 829 aa25.32■■□□□ 1.64
RPUSD1-206ENST00000565503 PPARAQ07869 468 aa25.32■■□□□ 1.64
RPUSD1-206ENST00000565503 TAPT1Q6NXT6 567 aa25.32■■□□□ 1.64
RPUSD1-206ENST00000565503 ADAMTS19Q8TE59 1207 aa25.32■■□□□ 1.64
RPUSD1-206ENST00000565503 NAPBQ9H115 298 aa25.32■■□□□ 1.64
RPUSD1-206ENST00000565503 TRPV6Q9H1D0 765 aa25.32■■□□□ 1.64
RPUSD1-206ENST00000565503 WNT8AQ9H1J5 351 aa25.32■■□□□ 1.64
RPUSD1-206ENST00000565503 VTA1Q9NP79 307 aa25.32■■□□□ 1.64
RPUSD1-206ENST00000565503 B4GALT4O60513 344 aa25.31■■□□□ 1.64
RPUSD1-206ENST00000565503 CCL23P55773 120 aa25.31■■□□□ 1.64
RPUSD1-206ENST00000565503 CCDC85BQ15834 202 aaPredicted RBP25.31■■□□□ 1.64
RPUSD1-206ENST00000565503 RCSD1Q6JBY9 416 aa25.31■■□□□ 1.64
RPUSD1-206ENST00000565503 MORC4Q8TE76 937 aa25.31■■□□□ 1.64
RPUSD1-206ENST00000565503 PDGFCQ9NRA1 345 aa25.31■■□□□ 1.64
RPUSD1-206ENST00000565503 RCAN3Q9UKA8 241 aa25.31■■□□□ 1.64
RPUSD1-206ENST00000565503 SLC4A7Q9Y6M7 1214 aa25.31■■□□□ 1.64
RPUSD1-206ENST00000565503 FBXO16Q8IX29 292 aaPredicted RBP25.3■■□□□ 1.64
RPUSD1-206ENST00000565503 TSPYL2Q9H2G4 693 aaPredicted RBP25.3■■□□□ 1.64
RPUSD1-206ENST00000565503 PCDHA11Q9Y5I1 949 aa25.3■■□□□ 1.64
RPUSD1-206ENST00000565503 XIRP2A4UGR9 3374 aa25.3■■□□□ 1.64
RPUSD1-206ENST00000565503 PFKMP08237 780 aa25.29■■□□□ 1.64
RPUSD1-206ENST00000565503 MUM1L1Q5H9M0 696 aa25.29■■□□□ 1.64
RPUSD1-206ENST00000565503 KCTD1Q719H9 257 aa25.29■■□□□ 1.64
RPUSD1-206ENST00000565503 IL27Q8NEV9 243 aa25.29■■□□□ 1.64
RPUSD1-206ENST00000565503 PRR12Q9ULL5 1215 aa25.29■■□□□ 1.64
RPUSD1-206ENST00000565503 STX8Q9UNK0 236 aa25.29■■□□□ 1.64
RPUSD1-206ENST00000565503 TTC41PQ6P2S7 1318 aa25.29■■□□□ 1.64
RPUSD1-206ENST00000565503 TCF20Q9UGU0 1960 aaKnown RBP25.28■■□□□ 1.64
RPUSD1-206ENST00000565503 SCN10AQ9Y5Y9 1956 aa25.28■■□□□ 1.64
RPUSD1-206ENST00000565503 PTGS1P23219 599 aa25.28■■□□□ 1.64
RPUSD1-206ENST00000565503 PSMC6P62333 389 aa25.28■■□□□ 1.64
RPUSD1-206ENST00000565503 EEPD1Q7L9B9 569 aa25.28■■□□□ 1.64
RPUSD1-206ENST00000565503 UHRF1Q96T88 793 aaPredicted RBP25.28■■□□□ 1.64
RPUSD1-206ENST00000565503 SEC62Q99442 399 aaKnown RBP25.28■■□□□ 1.64
RPUSD1-206ENST00000565503 ALDH8A1Q9H2A2 487 aaPredicted RBP25.28■■□□□ 1.64
RPUSD1-206ENST00000565503 CCPG1Q9ULG6 757 aa25.28■■□□□ 1.64
RPUSD1-206ENST00000565503 DDX52Q9Y2R4 599 aaKnown RBP eCLIP25.28■■□□□ 1.64
RPUSD1-206ENST00000565503 DDX49Q9Y6V7 483 aaKnown RBP25.28■■□□□ 1.64
RPUSD1-206ENST00000565503 SCN5AQ14524 2016 aa25.28■■□□□ 1.64
RPUSD1-206ENST00000565503 PRRC2BQ5JSZ5 2229 aaKnown RBP25.27■■□□□ 1.64
RPUSD1-206ENST00000565503 LOC102724159A0A0B4J2E5 919 aa25.27■■□□□ 1.64
RPUSD1-206ENST00000565503 TSPY2A6NKD2 308 aa25.27■■□□□ 1.64
RPUSD1-206ENST00000565503 ERC2O15083 957 aa25.27■■□□□ 1.64
RPUSD1-206ENST00000565503 ICAM1P05362 532 aa25.27■■□□□ 1.64
RPUSD1-206ENST00000565503 SUPT20HL2P0C7V6 817 aa25.27■■□□□ 1.64
RPUSD1-206ENST00000565503 PWP2Q15269 919 aaKnown RBP25.27■■□□□ 1.64
RPUSD1-206ENST00000565503 DUSP28Q4G0W2 176 aa25.27■■□□□ 1.64
RPUSD1-206ENST00000565503 ZMYM1Q5SVZ6 1142 aa25.27■■□□□ 1.64
RPUSD1-206ENST00000565503 C20orf194Q5TEA3 1177 aa25.27■■□□□ 1.64
RPUSD1-206ENST00000565503 PPP2R2DQ66LE6 453 aa25.27■■□□□ 1.64
RPUSD1-206ENST00000565503 NSMFQ6X4W1 530 aa25.27■■□□□ 1.64
RPUSD1-206ENST00000565503 KIAA1211Q6ZU35 1233 aa25.27■■□□□ 1.64
RPUSD1-206ENST00000565503 POLR3EQ9NVU0 708 aa25.27■■□□□ 1.64
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms