RNA–Protein interactions for RNA: ENST00000564968.1

CLCN7-208, Transcript of chloride voltage-gated channel 7, human

TSL 4

Gene CLCN7, Length 652 nt, Biotype retained intron, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CLCN7-208	ENST00000564968	FSCN1	Q16658	493 aa	Known RBP	18.92	■□□□□ 0.62
CLCN7-208	ENST00000564968	RASIP1	Q5U651	963 aa		18.92	■□□□□ 0.62
CLCN7-208	ENST00000564968	KCTD1	Q719H9	257 aa		18.92	■□□□□ 0.62
CLCN7-208	ENST00000564968	OTOP2	Q7RTS6	562 aa		18.92	■□□□□ 0.62
CLCN7-208	ENST00000564968	IFNL3	Q8IZI9	196 aa		18.92	■□□□□ 0.62
CLCN7-208	ENST00000564968	MICALL1	Q8N3F8	863 aa		18.92	■□□□□ 0.62
CLCN7-208	ENST00000564968	FAM133A	Q8N9E0	248 aa		18.92	■□□□□ 0.62
CLCN7-208	ENST00000564968	MKL1	Q969V6	931 aa		18.92	■□□□□ 0.62
CLCN7-208	ENST00000564968	AP5M1	Q9H0R1	490 aa		18.92	■□□□□ 0.62
CLCN7-208	ENST00000564968	MTIF3	Q9H2K0	278 aa	Known RBP	18.92	■□□□□ 0.62
CLCN7-208	ENST00000564968	CD4	P01730	458 aa		18.91	■□□□□ 0.62
CLCN7-208	ENST00000564968	ZFY	P08048	801 aa	Predicted RBP	18.91	■□□□□ 0.62
CLCN7-208	ENST00000564968	SLC1A4	P43007	532 aa		18.91	■□□□□ 0.62
CLCN7-208	ENST00000564968	TFAP4	Q01664	338 aa		18.91	■□□□□ 0.62
CLCN7-208	ENST00000564968	PDE4B	Q07343	736 aa		18.91	■□□□□ 0.62
CLCN7-208	ENST00000564968	RAB30	Q15771	203 aa		18.91	■□□□□ 0.62
CLCN7-208	ENST00000564968	TRERF1	Q96PN7	1200 aa		18.91	■□□□□ 0.62
CLCN7-208	ENST00000564968	NACAP1	Q9BZK3	213 aa		18.91	■□□□□ 0.62
CLCN7-208	ENST00000564968	NAPB	Q9H115	298 aa		18.91	■□□□□ 0.62
CLCN7-208	ENST00000564968	STX8	Q9UNK0	236 aa		18.91	■□□□□ 0.62
CLCN7-208	ENST00000564968	YBX2	Q9Y2T7	364 aa	Known RBP	18.91	■□□□□ 0.62
CLCN7-208	ENST00000564968	TCF20	Q9UGU0	1960 aa	Known RBP	18.91	■□□□□ 0.62
CLCN7-208	ENST00000564968	ZNF536	O15090	1300 aa		18.91	■□□□□ 0.62
CLCN7-208	ENST00000564968	NCOR1	O75376	2440 aa		18.91	■□□□□ 0.62
CLCN7-208	ENST00000564968	XIRP2	A4UGR9	3374 aa		18.9	■□□□□ 0.62
CLCN7-208	ENST00000564968	BDP1	A6H8Y1	2624 aa		18.9	■□□□□ 0.62
CLCN7-208	ENST00000564968	ASB14	A6NK59	587 aa		18.9	■□□□□ 0.62
CLCN7-208	ENST00000564968	DYNC1LI2	O43237	492 aa	Predicted RBP	18.9	■□□□□ 0.62
CLCN7-208	ENST00000564968	MCC	P23508	829 aa		18.9	■□□□□ 0.62
CLCN7-208	ENST00000564968	PSMC6	P62333	389 aa		18.9	■□□□□ 0.62
CLCN7-208	ENST00000564968	ITGA7	Q13683	1181 aa		18.9	■□□□□ 0.62
CLCN7-208	ENST00000564968	ADGRE1	Q14246	886 aa		18.9	■□□□□ 0.62
CLCN7-208	ENST00000564968	FAM160B2	Q86V87	743 aa		18.9	■□□□□ 0.62
CLCN7-208	ENST00000564968	NEDD1	Q8NHV4	660 aa		18.9	■□□□□ 0.62
CLCN7-208	ENST00000564968	HERVK_113	Q902F9	699 aa		18.9	■□□□□ 0.62
CLCN7-208	ENST00000564968	TRPV6	Q9H1D0	765 aa		18.9	■□□□□ 0.62
CLCN7-208	ENST00000564968	PDGFC	Q9NRA1	345 aa		18.9	■□□□□ 0.62
CLCN7-208	ENST00000564968	RCAN3	Q9UKA8	241 aa		18.9	■□□□□ 0.62
CLCN7-208	ENST00000564968	TANC1	Q9C0D5	1861 aa		18.9	■□□□□ 0.62
CLCN7-208	ENST00000564968	ZBBX	A8MT70	800 aa		18.89	■□□□□ 0.61
CLCN7-208	ENST00000564968	FGB	P02675	491 aa		18.89	■□□□□ 0.61
CLCN7-208	ENST00000564968	SLC3A2	P08195	630 aa	Known RBP	18.89	■□□□□ 0.61
CLCN7-208	ENST00000564968	SMPD1	P17405	629 aa		18.89	■□□□□ 0.61
CLCN7-208	ENST00000564968	RABGGTB	P53611	331 aa		18.89	■□□□□ 0.61
CLCN7-208	ENST00000564968	PPARA	Q07869	468 aa		18.89	■□□□□ 0.61
CLCN7-208	ENST00000564968	MUM1L1	Q5H9M0	696 aa		18.89	■□□□□ 0.61
CLCN7-208	ENST00000564968	TMEM63B	Q5T3F8	832 aa		18.89	■□□□□ 0.61
CLCN7-208	ENST00000564968	NSMF	Q6X4W1	530 aa		18.89	■□□□□ 0.61
CLCN7-208	ENST00000564968	IL27	Q8NEV9	243 aa		18.89	■□□□□ 0.61
CLCN7-208	ENST00000564968	CHURC1	Q8WUH1	139 aa		18.89	■□□□□ 0.61
CLCN7-208	ENST00000564968	FSD1	Q9BTV5	496 aa		18.89	■□□□□ 0.61
CLCN7-208	ENST00000564968	SLC28A3	Q9HAS3	691 aa		18.89	■□□□□ 0.61
CLCN7-208	ENST00000564968	SYNPO2	Q9UMS6	1093 aa		18.89	■□□□□ 0.61
CLCN7-208	ENST00000564968	GNE	Q9Y223	722 aa	Known RBP	18.89	■□□□□ 0.61
CLCN7-208	ENST00000564968	TRANK1	O15050	2925 aa		18.89	■□□□□ 0.61
CLCN7-208	ENST00000564968	PATL2	C9JE40	543 aa	Known RBP	18.88	■□□□□ 0.61
CLCN7-208	ENST00000564968	B4GALT4	O60513	344 aa		18.88	■□□□□ 0.61
CLCN7-208	ENST00000564968	FDX1	P10109	184 aa		18.88	■□□□□ 0.61
CLCN7-208	ENST00000564968	COL9A1	P20849	921 aa		18.88	■□□□□ 0.61
CLCN7-208	ENST00000564968	CCDC96	Q2M329	555 aa		18.88	■□□□□ 0.61
CLCN7-208	ENST00000564968	AKNAD1	Q5T1N1	836 aa		18.88	■□□□□ 0.61
CLCN7-208	ENST00000564968	PPP2R2D	Q66LE6	453 aa		18.88	■□□□□ 0.61
CLCN7-208	ENST00000564968	ADAMTS19	Q8TE59	1207 aa		18.88	■□□□□ 0.61
CLCN7-208	ENST00000564968	STAG1	Q8WVM7	1258 aa		18.88	■□□□□ 0.61
CLCN7-208	ENST00000564968	SCLY	Q96I15	445 aa		18.88	■□□□□ 0.61
CLCN7-208	ENST00000564968	GMCL1	Q96IK5	515 aa		18.88	■□□□□ 0.61
CLCN7-208	ENST00000564968	PURB	Q96QR8	312 aa	Known RBP	18.88	■□□□□ 0.61
CLCN7-208	ENST00000564968	NOC4L	Q9BVI4	516 aa	Known RBP	18.88	■□□□□ 0.61
CLCN7-208	ENST00000564968	WNT8A	Q9H1J5	351 aa		18.88	■□□□□ 0.61
CLCN7-208	ENST00000564968	RAPGEFL1	Q9UHV5	662 aa		18.88	■□□□□ 0.61
CLCN7-208	ENST00000564968	CCPG1	Q9ULG6	757 aa		18.88	■□□□□ 0.61
CLCN7-208	ENST00000564968	TSPY2	A6NKD2	308 aa		18.87	■□□□□ 0.61
CLCN7-208	ENST00000564968	GRIN2D	O15399	1336 aa		18.87	■□□□□ 0.61
CLCN7-208	ENST00000564968	ZEB2	O60315	1214 aa		18.87	■□□□□ 0.61
CLCN7-208	ENST00000564968	NMT2	O60551	498 aa		18.87	■□□□□ 0.61
CLCN7-208	ENST00000564968	CABYR	O75952	493 aa		18.87	■□□□□ 0.61
CLCN7-208	ENST00000564968	CTDSPL2	Q05D32	466 aa		18.87	■□□□□ 0.61
CLCN7-208	ENST00000564968	LRRFIP1	Q32MZ4	808 aa	Known RBP	18.87	■□□□□ 0.61
CLCN7-208	ENST00000564968	TKFC	Q3LXA3	575 aa		18.87	■□□□□ 0.61
CLCN7-208	ENST00000564968	SLC43A3	Q8NBI5	491 aa		18.87	■□□□□ 0.61
CLCN7-208	ENST00000564968	MYOG	P15173	224 aa		18.86	■□□□□ 0.61
CLCN7-208	ENST00000564968	ATXN2L	Q8WWM7	1075 aa	Known RBP	18.86	■□□□□ 0.61
CLCN7-208	ENST00000564968	ASB2	Q96Q27	587 aa		18.86	■□□□□ 0.61
CLCN7-208	ENST00000564968	UHRF1	Q96T88	793 aa	Predicted RBP	18.86	■□□□□ 0.61
CLCN7-208	ENST00000564968	CYP39A1	Q9NYL5	469 aa		18.86	■□□□□ 0.61
CLCN7-208	ENST00000564968	PRR12	Q9ULL5	1215 aa		18.86	■□□□□ 0.61
CLCN7-208	ENST00000564968	SLC4A7	Q9Y6M7	1214 aa		18.86	■□□□□ 0.61
CLCN7-208	ENST00000564968	NKX3-2	P78367	333 aa		18.85	■□□□□ 0.61
CLCN7-208	ENST00000564968	DIEXF	Q68CQ4	756 aa	Known RBP	18.85	■□□□□ 0.61
CLCN7-208	ENST00000564968	KIAA1211	Q6ZU35	1233 aa		18.85	■□□□□ 0.61
CLCN7-208	ENST00000564968	INCENP	Q9NQS7	918 aa		18.85	■□□□□ 0.61
CLCN7-208	ENST00000564968	COL4A4	P53420	1690 aa	Predicted RBP	18.85	■□□□□ 0.61
CLCN7-208	ENST00000564968	MRPS5	P82675	430 aa	Known RBP	18.84	■□□□□ 0.61
CLCN7-208	ENST00000564968	TAPT1	Q6NXT6	567 aa		18.84	■□□□□ 0.61
CLCN7-208	ENST00000564968	DEFB128	Q7Z7B8	93 aa		18.84	■□□□□ 0.61
CLCN7-208	ENST00000564968	OTUD7A	Q8TE49	926 aa	Predicted RBP	18.84	■□□□□ 0.61
CLCN7-208	ENST00000564968	PPP1R13L	Q8WUF5	828 aa		18.84	■□□□□ 0.61
CLCN7-208	ENST00000564968	VTA1	Q9NP79	307 aa		18.84	■□□□□ 0.61
CLCN7-208	ENST00000564968	TRMT13	Q9NUP7	481 aa	Known RBP	18.84	■□□□□ 0.61
CLCN7-208	ENST00000564968	RANBP6	O60518	1105 aa	Known RBP	18.83	■□□□□ 0.6

Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms