RNA–Protein interactions for RNA: ENST00000563842.5

CLK3-213, Transcript of CDC like kinase 3, humanhuman

TSL 5

Gene CLK3, Length 860 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-213ENST00000563842 C11orf49Q9H6J7 331 aa15.6■□□□□ 0.09
CLK3-213ENST00000563842 CYP39A1Q9NYL5 469 aa15.6■□□□□ 0.09
CLK3-213ENST00000563842 ADD3Q9UEY8 706 aaKnown RBP15.6■□□□□ 0.09
CLK3-213ENST00000563842 CEP290O15078 2479 aa15.59■□□□□ 0.09
CLK3-213ENST00000563842 MKI67P46013 3256 aaKnown RBP15.59■□□□□ 0.09
CLK3-213ENST00000563842 LCTP09848 1927 aa15.59■□□□□ 0.09
CLK3-213ENST00000563842 LOC102724159A0A0B4J2E5 919 aa15.59■□□□□ 0.09
CLK3-213ENST00000563842 PALM3A6NDB9 673 aaPredicted RBP15.59■□□□□ 0.09
CLK3-213ENST00000563842 CCDC69A6NI79 296 aa15.59■□□□□ 0.09
CLK3-213ENST00000563842 RARBP10826 455 aa15.59■□□□□ 0.09
CLK3-213ENST00000563842 AKR1A1P14550 325 aa15.59■□□□□ 0.09
CLK3-213ENST00000563842 KIF5BP33176 963 aa15.59■□□□□ 0.09
CLK3-213ENST00000563842 CNTN2Q02246 1040 aa15.59■□□□□ 0.09
CLK3-213ENST00000563842 PWP2Q15269 919 aaKnown RBP15.59■□□□□ 0.09
CLK3-213ENST00000563842 NFXL1Q6ZNB6 911 aa15.59■□□□□ 0.09
CLK3-213ENST00000563842 NEK1Q96PY6 1258 aa15.59■□□□□ 0.09
CLK3-213ENST00000563842 MPHOSPH6Q99547 160 aaKnown RBP15.59■□□□□ 0.09
CLK3-213ENST00000563842 VAT1LQ9HCJ6 419 aa15.59■□□□□ 0.09
CLK3-213ENST00000563842 CDKN2AIPQ9NXV6 580 aaPredicted RBP15.59■□□□□ 0.09
CLK3-213ENST00000563842 MAD2L2Q9UI95 211 aa15.59■□□□□ 0.09
CLK3-213ENST00000563842 FAM184BQ9ULE4 1060 aa15.59■□□□□ 0.09
CLK3-213ENST00000563842 ABCB11O95342 1321 aa15.59■□□□□ 0.09
CLK3-213ENST00000563842 ALPK3Q96L96 1907 aa15.58■□□□□ 0.09
CLK3-213ENST00000563842 PTPDC1A2A3K4 754 aa15.58■□□□□ 0.08
CLK3-213ENST00000563842 B4DLN1 442 aa15.58■□□□□ 0.08
CLK3-213ENST00000563842 DLL1O00548 723 aa15.58■□□□□ 0.08
CLK3-213ENST00000563842 EPB41L2O43491 1005 aaKnown RBP15.58■□□□□ 0.08
CLK3-213ENST00000563842 DDAH1O94760 285 aa15.58■□□□□ 0.08
CLK3-213ENST00000563842 HMGB1P09429 215 aaKnown RBP15.58■□□□□ 0.08
CLK3-213ENST00000563842 CALM1P0DP23 149 aa15.58■□□□□ 0.08
CLK3-213ENST00000563842 CALM2P0DP24 149 aa15.58■□□□□ 0.08
CLK3-213ENST00000563842 CALM3P0DP25 149 aa15.58■□□□□ 0.08
CLK3-213ENST00000563842 LIFRP42702 1097 aa15.58■□□□□ 0.08
CLK3-213ENST00000563842 MRPL12P52815 198 aaKnown RBP15.58■□□□□ 0.08
CLK3-213ENST00000563842 TROAPQ12815 778 aa15.58■□□□□ 0.08
CLK3-213ENST00000563842 ACVR2BQ13705 512 aa15.58■□□□□ 0.08
CLK3-213ENST00000563842 USH1GQ495M9 461 aa15.58■□□□□ 0.08
CLK3-213ENST00000563842 RNF207Q6ZRF8 634 aa15.58■□□□□ 0.08
CLK3-213ENST00000563842 ARMCX2Q7L311 632 aa15.58■□□□□ 0.08
CLK3-213ENST00000563842 FBXO11Q86XK2 927 aa15.58■□□□□ 0.08
CLK3-213ENST00000563842 MCF2L2Q86YR7 1114 aa15.58■□□□□ 0.08
CLK3-213ENST00000563842 STAG2Q8N3U4 1231 aa15.58■□□□□ 0.08
CLK3-213ENST00000563842 RGS22Q8NE09 1264 aa15.58■□□□□ 0.08
CLK3-213ENST00000563842 CTCFLQ8NI51 663 aaPredicted RBP15.58■□□□□ 0.08
CLK3-213ENST00000563842 CPVLQ9H3G5 476 aa15.58■□□□□ 0.08
CLK3-213ENST00000563842 JMJD4Q9H9V9 463 aa15.58■□□□□ 0.08
CLK3-213ENST00000563842 LY9Q9HBG7 655 aa15.58■□□□□ 0.08
CLK3-213ENST00000563842 ZHX1Q9UKY1 873 aaPredicted RBP15.58■□□□□ 0.08
CLK3-213ENST00000563842 MRPL11Q9Y3B7 192 aaKnown RBP15.58■□□□□ 0.08
CLK3-213ENST00000563842 NR2E3Q9Y5X4 410 aa15.58■□□□□ 0.08
CLK3-213ENST00000563842 KBTBD13C9JR72 458 aa15.57■□□□□ 0.08
CLK3-213ENST00000563842 DNM1LO00429 736 aa15.57■□□□□ 0.08
CLK3-213ENST00000563842 SH2B2O14492 632 aaPredicted RBP15.57■□□□□ 0.08
CLK3-213ENST00000563842 SNAI1O95863 264 aaPredicted RBP15.57■□□□□ 0.08
CLK3-213ENST00000563842 ZNF865P0CJ78 1059 aaPredicted RBP15.57■□□□□ 0.08
CLK3-213ENST00000563842 GNAQP50148 359 aa15.57■□□□□ 0.08
CLK3-213ENST00000563842 BAATQ14032 418 aaPredicted RBP15.57■□□□□ 0.08
CLK3-213ENST00000563842 QRICH1Q2TAL8 776 aa15.57■□□□□ 0.08
CLK3-213ENST00000563842 SYNE3Q6ZMZ3 975 aa15.57■□□□□ 0.08
CLK3-213ENST00000563842 CCDC144CPQ8IYA2 1237 aa15.57■□□□□ 0.08
CLK3-213ENST00000563842 ZNF654Q8IZM8 581 aa15.57■□□□□ 0.08
CLK3-213ENST00000563842 DIS3LQ8TF46 1054 aaKnown RBP15.57■□□□□ 0.08
CLK3-213ENST00000563842 NUP133Q8WUM0 1156 aa15.57■□□□□ 0.08
CLK3-213ENST00000563842 FGD4Q96M96 766 aa15.57■□□□□ 0.08
CLK3-213ENST00000563842 AMNQ9BXJ7 453 aa15.57■□□□□ 0.08
CLK3-213ENST00000563842 SOWAHBA6NEL2 793 aa15.56■□□□□ 0.08
CLK3-213ENST00000563842 NFIBO00712 420 aa15.56■□□□□ 0.08
CLK3-213ENST00000563842 ZBTB5O15062 677 aa15.56■□□□□ 0.08
CLK3-213ENST00000563842 EVI5O60447 810 aa15.56■□□□□ 0.08
CLK3-213ENST00000563842 MNX1P50219 401 aaPredicted RBP15.56■□□□□ 0.08
CLK3-213ENST00000563842 DHX32Q7L7V1 743 aaKnown RBP15.56■□□□□ 0.08
CLK3-213ENST00000563842 RNF180Q86T96 592 aa15.56■□□□□ 0.08
CLK3-213ENST00000563842 CLEC4DQ8WXI8 215 aa15.56■□□□□ 0.08
CLK3-213ENST00000563842 LZTS2Q9BRK4 669 aa15.56■□□□□ 0.08
CLK3-213ENST00000563842 RIOX1Q9H6W3 641 aa15.56■□□□□ 0.08
CLK3-213ENST00000563842 SENP2Q9HC62 589 aa15.56■□□□□ 0.08
CLK3-213ENST00000563842 XPNPEP3Q9NQH7 507 aa15.56■□□□□ 0.08
CLK3-213ENST00000563842 TAL1P17542 331 aaPredicted RBP15.55■□□□□ 0.08
CLK3-213ENST00000563842 CALML3P27482 149 aa15.55■□□□□ 0.08
CLK3-213ENST00000563842 SMARCA1P28370 1054 aa15.55■□□□□ 0.08
CLK3-213ENST00000563842 HSPA4P34932 840 aa15.55■□□□□ 0.08
CLK3-213ENST00000563842 RPS6P62753 249 aaKnown RBP15.55■□□□□ 0.08
CLK3-213ENST00000563842 ANO1Q5XXA6 986 aa15.55■□□□□ 0.08
CLK3-213ENST00000563842 SAMD3Q8N6K7 520 aa15.55■□□□□ 0.08
CLK3-213ENST00000563842 DNERQ8NFT8 737 aa15.55■□□□□ 0.08
CLK3-213ENST00000563842 MTMR8Q96EF0 704 aa15.55■□□□□ 0.08
CLK3-213ENST00000563842 SPC25Q9HBM1 224 aa15.55■□□□□ 0.08
CLK3-213ENST00000563842 MAP3K20Q9NYL2 800 aaKnown RBP15.55■□□□□ 0.08
CLK3-213ENST00000563842 SLC12A7Q9Y666 1083 aa15.55■□□□□ 0.08
CLK3-213ENST00000563842 EIF5BO60841 1220 aaKnown RBP15.54■□□□□ 0.08
CLK3-213ENST00000563842 DUSP11O75319 330 aaKnown RBP15.54■□□□□ 0.08
CLK3-213ENST00000563842 COL6A1P12109 1028 aa15.54■□□□□ 0.08
CLK3-213ENST00000563842 ALDH5A1P51649 535 aaPredicted RBP15.54■□□□□ 0.08
CLK3-213ENST00000563842 SGMS1Q86VZ5 419 aa15.54■□□□□ 0.08
CLK3-213ENST00000563842 MORC4Q8TE76 937 aa15.54■□□□□ 0.08
CLK3-213ENST00000563842 KCNB2Q92953 911 aa15.54■□□□□ 0.08
CLK3-213ENST00000563842 VTA1Q9NP79 307 aa15.54■□□□□ 0.08
CLK3-213ENST00000563842 KIAA1217Q5T5P2 1943 aa15.54■□□□□ 0.08
CLK3-213ENST00000563842 LRRC37A2A6NM11 1700 aa15.54■□□□□ 0.08
CLK3-213ENST00000563842 PNMA6FA0A0J9YX94 578 aa15.53■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms