RNA–Protein interactions for RNA: ENST00000563790.5

HDGFL3-204, Transcript of HDGF like 3, humanhuman

TSL 3

Gene HDGFL3, Length 934 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDGFL3-204ENST00000563790 SLC30A4O14863 429 aa13.46□□□□□ -0.25
HDGFL3-204ENST00000563790 PI15O43692 258 aa13.46□□□□□ -0.25
HDGFL3-204ENST00000563790 SUPT20HL2P0C7V6 817 aa13.46□□□□□ -0.25
HDGFL3-204ENST00000563790 GTF2F1P35269 517 aaKnown RBP eCLIP13.46□□□□□ -0.25
HDGFL3-204ENST00000563790 NDUFV1P49821 464 aa13.46□□□□□ -0.25
HDGFL3-204ENST00000563790 NEXNQ0ZGT2 675 aa13.46□□□□□ -0.25
HDGFL3-204ENST00000563790 ZNF792Q3KQV3 632 aa13.46□□□□□ -0.25
HDGFL3-204ENST00000563790 VARS2Q5ST30 1063 aaKnown RBP13.46□□□□□ -0.25
HDGFL3-204ENST00000563790 MBIPQ9NS73 344 aa13.46□□□□□ -0.25
HDGFL3-204ENST00000563790 INSL6Q9Y581 213 aa13.46□□□□□ -0.25
HDGFL3-204ENST00000563790 ARP10275 920 aa13.45□□□□□ -0.26
HDGFL3-204ENST00000563790 VCAM1P19320 739 aa13.45□□□□□ -0.26
HDGFL3-204ENST00000563790 ZEB1P37275 1124 aaPredicted RBP13.45□□□□□ -0.26
HDGFL3-204ENST00000563790 MSL3Q8N5Y2 521 aaKnown RBP13.45□□□□□ -0.26
HDGFL3-204ENST00000563790 CLEC1BQ9P126 229 aa13.45□□□□□ -0.26
HDGFL3-204ENST00000563790 MROH5Q6ZUA9 1318 aa13.44□□□□□ -0.26
HDGFL3-204ENST00000563790 C2CD3Q4AC94 2353 aa13.44□□□□□ -0.26
HDGFL3-204ENST00000563790 ACACAQ13085 2346 aa13.44□□□□□ -0.26
HDGFL3-204ENST00000563790 LDHBP07195 334 aaKnown RBP13.44□□□□□ -0.26
HDGFL3-204ENST00000563790 FOXO4P98177 505 aa13.44□□□□□ -0.26
HDGFL3-204ENST00000563790 SHROOM1Q2M3G4 852 aaPredicted RBP13.44□□□□□ -0.26
HDGFL3-204ENST00000563790 DUSP27Q5VZP5 1158 aa13.44□□□□□ -0.26
HDGFL3-204ENST00000563790 KSR2Q6VAB6 950 aa13.44□□□□□ -0.26
HDGFL3-204ENST00000563790 NCAPG2Q86XI2 1143 aa13.44□□□□□ -0.26
HDGFL3-204ENST00000563790 ADAM32Q8TC27 787 aa13.44□□□□□ -0.26
HDGFL3-204ENST00000563790 RTP3Q9BQQ7 232 aa13.44□□□□□ -0.26
HDGFL3-204ENST00000563790 PI4KAP2A4QPH2 592 aa13.43□□□□□ -0.26
HDGFL3-204ENST00000563790 TMEM8BA6NDV4 472 aa13.43□□□□□ -0.26
HDGFL3-204ENST00000563790 SNAI1O95863 264 aaPredicted RBP13.43□□□□□ -0.26
HDGFL3-204ENST00000563790 PGK2P07205 417 aa13.43□□□□□ -0.26
HDGFL3-204ENST00000563790 BEX3Q00994 111 aa13.43□□□□□ -0.26
HDGFL3-204ENST00000563790 TAF7LQ5H9L4 462 aa13.43□□□□□ -0.26
HDGFL3-204ENST00000563790 PI4KAP1Q8N8J0 262 aa13.43□□□□□ -0.26
HDGFL3-204ENST00000563790 FLCNQ8NFG4 579 aa13.43□□□□□ -0.26
HDGFL3-204ENST00000563790 IGFLR1Q9H665 355 aa13.43□□□□□ -0.26
HDGFL3-204ENST00000563790 TRMT13Q9NUP7 481 aaKnown RBP13.43□□□□□ -0.26
HDGFL3-204ENST00000563790 ZHX1Q9UKY1 873 aaPredicted RBP13.43□□□□□ -0.26
HDGFL3-204ENST00000563790 ZBTB21Q9ULJ3 1066 aa13.43□□□□□ -0.26
HDGFL3-204ENST00000563790 CHMP3Q9Y3E7 222 aa13.43□□□□□ -0.26
HDGFL3-204ENST00000563790 CACNA1FO60840 1977 aa13.42□□□□□ -0.26
HDGFL3-204ENST00000563790 SHROOM3Q8TF72 1996 aa13.42□□□□□ -0.26
HDGFL3-204ENST00000563790 TGM1P22735 817 aa13.42□□□□□ -0.26
HDGFL3-204ENST00000563790 HTRA4P83105 476 aaPredicted RBP13.42□□□□□ -0.26
HDGFL3-204ENST00000563790 CCDC57Q2TAC2 916 aa13.42□□□□□ -0.26
HDGFL3-204ENST00000563790 SUSD6Q92537 303 aa13.42□□□□□ -0.26
HDGFL3-204ENST00000563790 LMAN2LQ9H0V9 348 aa13.42□□□□□ -0.26
HDGFL3-204ENST00000563790 MIA3Q5JRA6 1907 aa13.42□□□□□ -0.26
HDGFL3-204ENST00000563790 N4BP2L1Q5TBK1 243 aaPredicted RBP13.41□□□□□ -0.26
HDGFL3-204ENST00000563790 TMEM192Q8IY95 271 aa13.41□□□□□ -0.26
HDGFL3-204ENST00000563790 NETO1Q8TDF5 533 aa13.41□□□□□ -0.26
HDGFL3-204ENST00000563790 PPIL4Q8WUA2 492 aaKnown RBP eCLIP13.41□□□□□ -0.26
HDGFL3-204ENST00000563790 CACNA2D2Q9NY47 1150 aa13.41□□□□□ -0.26
HDGFL3-204ENST00000563790 CELSR3Q9NYQ7 3312 aa13.4□□□□□ -0.26
HDGFL3-204ENST00000563790 ABHD14A-ACY1A0A1B0GW23 586 aa13.4□□□□□ -0.26
HDGFL3-204ENST00000563790 KRT38O76015 456 aa13.4□□□□□ -0.26
HDGFL3-204ENST00000563790 NPR3P17342 541 aa13.4□□□□□ -0.26
HDGFL3-204ENST00000563790 RBM25P49756 843 aaKnown RBP13.4□□□□□ -0.26
HDGFL3-204ENST00000563790 USP14P54578 494 aa13.4□□□□□ -0.26
HDGFL3-204ENST00000563790 ZYXQ15942 572 aaKnown RBP13.4□□□□□ -0.26
HDGFL3-204ENST00000563790 CCDC144BQ3MJ40 725 aa13.4□□□□□ -0.26
HDGFL3-204ENST00000563790 FAM117BQ6P1L5 589 aa13.4□□□□□ -0.26
HDGFL3-204ENST00000563790 MAMDC4Q6UXC1 1216 aa13.4□□□□□ -0.26
HDGFL3-204ENST00000563790 FBXO11Q86XK2 927 aa13.4□□□□□ -0.26
HDGFL3-204ENST00000563790 MB21D1Q8N884 522 aa13.4□□□□□ -0.26
HDGFL3-204ENST00000563790 RETREG2Q8NC44 543 aa13.4□□□□□ -0.26
HDGFL3-204ENST00000563790 MMP19Q99542 508 aa13.4□□□□□ -0.26
HDGFL3-204ENST00000563790 FEZ1Q99689 392 aa13.4□□□□□ -0.26
HDGFL3-204ENST00000563790 HOXC10Q9NYD6 342 aa13.4□□□□□ -0.26
HDGFL3-204ENST00000563790 TICRRQ7Z2Z1 1910 aa13.4□□□□□ -0.26
HDGFL3-204ENST00000563790 PATJQ8NI35 1801 aa13.39□□□□□ -0.27
HDGFL3-204ENST00000563790 KINO60870 393 aaKnown RBP13.39□□□□□ -0.27
HDGFL3-204ENST00000563790 EFCAB14O75071 495 aa13.39□□□□□ -0.27
HDGFL3-204ENST00000563790 SP9P0CG40 484 aa13.39□□□□□ -0.27
HDGFL3-204ENST00000563790 PSMC6P62333 389 aa13.39□□□□□ -0.27
HDGFL3-204ENST00000563790 ACVR2BQ13705 512 aa13.39□□□□□ -0.27
HDGFL3-204ENST00000563790 COG2Q14746 738 aa13.39□□□□□ -0.27
HDGFL3-204ENST00000563790 LRRFIP1Q32MZ4 808 aaKnown RBP13.39□□□□□ -0.27
HDGFL3-204ENST00000563790 CNKSR3Q6P9H4 555 aa13.39□□□□□ -0.27
HDGFL3-204ENST00000563790 DDX1Q92499 740 aaKnown RBP13.39□□□□□ -0.27
HDGFL3-204ENST00000563790 SECISBP2LQ93073 1101 aaKnown RBP13.39□□□□□ -0.27
HDGFL3-204ENST00000563790 KIF12Q96FN5 646 aa13.39□□□□□ -0.27
HDGFL3-204ENST00000563790 FAM163AQ96GL9 167 aaPredicted RBP13.39□□□□□ -0.27
HDGFL3-204ENST00000563790 KIAA1683Q9H0B3 1180 aa13.39□□□□□ -0.27
HDGFL3-204ENST00000563790 SMOC2Q9H3U7 446 aa13.39□□□□□ -0.27
HDGFL3-204ENST00000563790 RPAP3Q9H6T3 665 aaPredicted RBP13.39□□□□□ -0.27
HDGFL3-204ENST00000563790 USP18Q9UMW8 372 aa13.39□□□□□ -0.27
HDGFL3-204ENST00000563790 ASTN1O14525 1302 aa13.39□□□□□ -0.27
HDGFL3-204ENST00000563790 GDF11O95390 407 aa13.38□□□□□ -0.27
HDGFL3-204ENST00000563790 RHBDL3P58872 404 aa13.38□□□□□ -0.27
HDGFL3-204ENST00000563790 EFHBQ8N7U6 833 aa13.38□□□□□ -0.27
HDGFL3-204ENST00000563790 RIN2Q8WYP3 895 aaPredicted RBP13.38□□□□□ -0.27
HDGFL3-204ENST00000563790 PIK3R5Q8WYR1 880 aa13.38□□□□□ -0.27
HDGFL3-204ENST00000563790 BORCS6Q96GS4 357 aa13.38□□□□□ -0.27
HDGFL3-204ENST00000563790 PUS3Q9BZE2 481 aaKnown RBP13.38□□□□□ -0.27
HDGFL3-204ENST00000563790 PI4KBQ9UBF8 816 aa13.38□□□□□ -0.27
HDGFL3-204ENST00000563790 MYH1P12882 1939 aa13.38□□□□□ -0.27
HDGFL3-204ENST00000563790 KIAA1671Q9BY89 1806 aa13.38□□□□□ -0.27
HDGFL3-204ENST00000563790 BTDP43251 543 aa13.37□□□□□ -0.27
HDGFL3-204ENST00000563790 RIPK4P57078 832 aa13.37□□□□□ -0.27
HDGFL3-204ENST00000563790 PLS1Q14651 629 aa13.37□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms