RNA–Protein interactions for RNA: ENST00000563781.5

HERPUD1-207, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 3

Gene HERPUD1, Length 774 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-207ENST00000563781 PRMT6Q96LA8 375 aaPredicted RBP6.23□□□□□ -1.41
HERPUD1-207ENST00000563781 TRERF1Q96PN7 1200 aa6.23□□□□□ -1.41
HERPUD1-207ENST00000563781 STRBPQ96SI9 672 aaKnown RBP6.23□□□□□ -1.41
HERPUD1-207ENST00000563781 TDRD3Q9H7E2 651 aaKnown RBP6.23□□□□□ -1.41
HERPUD1-207ENST00000563781 DIAPH3Q9NSV4 1193 aa6.23□□□□□ -1.41
HERPUD1-207ENST00000563781 AATFQ9NY61 560 aaKnown RBP eCLIP6.23□□□□□ -1.41
HERPUD1-207ENST00000563781 KLK14Q9P0G3 267 aa6.23□□□□□ -1.41
HERPUD1-207ENST00000563781 HACL1Q9UJ83 578 aa6.23□□□□□ -1.41
HERPUD1-207ENST00000563781 CLRN2A0PK11 232 aa6.22□□□□□ -1.41
HERPUD1-207ENST00000563781 IQCA1LA6NCM1 817 aa6.22□□□□□ -1.41
HERPUD1-207ENST00000563781 HIP1O00291 1037 aa6.22□□□□□ -1.41
HERPUD1-207ENST00000563781 SGSM2O43147 1006 aa6.22□□□□□ -1.41
HERPUD1-207ENST00000563781 GPAA1O43292 621 aa6.22□□□□□ -1.41
HERPUD1-207ENST00000563781 PRKAB2O43741 272 aa6.22□□□□□ -1.41
HERPUD1-207ENST00000563781 WDHD1O75717 1129 aaPredicted RBP6.22□□□□□ -1.41
HERPUD1-207ENST00000563781 VEGFAP15692 232 aaPredicted RBP6.22□□□□□ -1.41
HERPUD1-207ENST00000563781 GMPRP36959 345 aa6.22□□□□□ -1.41
HERPUD1-207ENST00000563781 RBM5P52756 815 aaKnown RBP eCLIP6.22□□□□□ -1.41
HERPUD1-207ENST00000563781 CACNB3P54284 484 aa6.22□□□□□ -1.41
HERPUD1-207ENST00000563781 TNP2Q05952 138 aa6.22□□□□□ -1.41
HERPUD1-207ENST00000563781 NFIAQ12857 509 aa6.22□□□□□ -1.41
HERPUD1-207ENST00000563781 GAS6Q14393 721 aa6.22□□□□□ -1.41
HERPUD1-207ENST00000563781 IER5Q5VY09 327 aa6.22□□□□□ -1.41
HERPUD1-207ENST00000563781 CWC27Q6UX04 472 aaKnown RBP6.22□□□□□ -1.41
HERPUD1-207ENST00000563781 USP50Q70EL3 339 aaPredicted RBP6.22□□□□□ -1.41
HERPUD1-207ENST00000563781 ZSCAN29Q8IWY8 852 aaPredicted RBP6.22□□□□□ -1.41
HERPUD1-207ENST00000563781 TEX11Q8IYF3 940 aa6.22□□□□□ -1.41
HERPUD1-207ENST00000563781 ANKRD13AQ8IZ07 590 aa6.22□□□□□ -1.41
HERPUD1-207ENST00000563781 COL25A1Q9BXS0 654 aaPredicted RBP6.22□□□□□ -1.41
HERPUD1-207ENST00000563781 ARMT1Q9H993 441 aa6.22□□□□□ -1.41
HERPUD1-207ENST00000563781 RRAGCQ9HB90 399 aa6.22□□□□□ -1.41
HERPUD1-207ENST00000563781 DDX4Q9NQI0 724 aaKnown RBP6.22□□□□□ -1.41
HERPUD1-207ENST00000563781 HELLSQ9NRZ9 838 aa6.22□□□□□ -1.41
HERPUD1-207ENST00000563781 USP40Q9NVE5 1235 aa6.22□□□□□ -1.41
HERPUD1-207ENST00000563781 ZNF70Q9UC06 446 aaPredicted RBP6.22□□□□□ -1.41
HERPUD1-207ENST00000563781 PGAP2Q9UHJ9 254 aa6.22□□□□□ -1.41
HERPUD1-207ENST00000563781 DMGDHQ9UI17 866 aaKnown RBP6.22□□□□□ -1.41
HERPUD1-207ENST00000563781 DCTN4Q9UJW0 460 aa6.22□□□□□ -1.41
HERPUD1-207ENST00000563781 HCN2Q9UL51 889 aa6.22□□□□□ -1.41
HERPUD1-207ENST00000563781 MYH13Q9UKX3 1938 aa6.22□□□□□ -1.41
HERPUD1-207ENST00000563781 CCDC171Q6TFL3 1326 aa6.22□□□□□ -1.41
HERPUD1-207ENST00000563781 RAD50Q92878 1312 aa6.22□□□□□ -1.41
HERPUD1-207ENST00000563781 MYO5AQ9Y4I1 1855 aaKnown RBP6.22□□□□□ -1.41
HERPUD1-207ENST00000563781 CNTNAP1P78357 1384 aa6.21□□□□□ -1.41
HERPUD1-207ENST00000563781 TGFBR3LH3BV60 316 aa6.21□□□□□ -1.42
HERPUD1-207ENST00000563781 TNFRSF10BO14763 440 aa6.21□□□□□ -1.42
HERPUD1-207ENST00000563781 BAG3O95817 575 aa6.21□□□□□ -1.42
HERPUD1-207ENST00000563781 FAM157BP0CG42 384 aa6.21□□□□□ -1.42
HERPUD1-207ENST00000563781 MAPTP10636 758 aaKnown RBP6.21□□□□□ -1.42
HERPUD1-207ENST00000563781 KRT76Q01546 638 aa6.21□□□□□ -1.42
HERPUD1-207ENST00000563781 MRPL58Q14197 206 aaKnown RBP6.21□□□□□ -1.42
HERPUD1-207ENST00000563781 C8orf34Q49A92 452 aa6.21□□□□□ -1.42
HERPUD1-207ENST00000563781 MCMDC2Q4G0Z9 681 aa6.21□□□□□ -1.42
HERPUD1-207ENST00000563781 RNFT1Q5M7Z0 435 aa6.21□□□□□ -1.42
HERPUD1-207ENST00000563781 VPS53Q5VIR6 699 aa6.21□□□□□ -1.42
HERPUD1-207ENST00000563781 ZFPM1Q8IX07 1006 aa6.21□□□□□ -1.42
HERPUD1-207ENST00000563781 GTF3C2Q8WUA4 911 aaPredicted RBP6.21□□□□□ -1.42
HERPUD1-207ENST00000563781 IFT43Q96FT9 208 aa6.21□□□□□ -1.42
HERPUD1-207ENST00000563781 IDI2Q9BXS1 227 aa6.21□□□□□ -1.42
HERPUD1-207ENST00000563781 EPB41L4AQ9HCS5 686 aaPredicted RBP6.21□□□□□ -1.42
HERPUD1-207ENST00000563781 GGA3Q9NZ52 723 aa6.21□□□□□ -1.42
HERPUD1-207ENST00000563781 ATXN7L1Q9ULK2 861 aaPredicted RBP6.21□□□□□ -1.42
HERPUD1-207ENST00000563781 PHF24Q9UPV7 400 aa6.21□□□□□ -1.42
HERPUD1-207ENST00000563781 FLT1P17948 1338 aa6.21□□□□□ -1.42
HERPUD1-207ENST00000563781 PITPNM2Q9BZ72 1349 aa6.21□□□□□ -1.42
HERPUD1-207ENST00000563781 DCDC2BA2VCK2 349 aa6.2□□□□□ -1.42
HERPUD1-207ENST00000563781 GSG1L2A8MUP6 293 aa6.2□□□□□ -1.42
HERPUD1-207ENST00000563781 SCAMP3O14828 347 aaKnown RBP6.2□□□□□ -1.42
HERPUD1-207ENST00000563781 EFSO43281 561 aa6.2□□□□□ -1.42
HERPUD1-207ENST00000563781 ENTPD3O75355 529 aa6.2□□□□□ -1.42
HERPUD1-207ENST00000563781 BRD2P25440 801 aaKnown RBP6.2□□□□□ -1.42
HERPUD1-207ENST00000563781 PTH1RQ03431 593 aa6.2□□□□□ -1.42
HERPUD1-207ENST00000563781 ECM1Q16610 540 aa6.2□□□□□ -1.42
HERPUD1-207ENST00000563781 FAM26DQ5JW98 314 aa6.2□□□□□ -1.42
HERPUD1-207ENST00000563781 ANGEL2Q5VTE6 544 aaKnown RBP6.2□□□□□ -1.42
HERPUD1-207ENST00000563781 FKBP1CQ5VVH2 108 aa6.2□□□□□ -1.42
HERPUD1-207ENST00000563781 BTLAQ7Z6A9 289 aa6.2□□□□□ -1.42
HERPUD1-207ENST00000563781 CERS3Q8IU89 383 aa6.2□□□□□ -1.42
HERPUD1-207ENST00000563781 MAPKAPK5Q8IW41 473 aa6.2□□□□□ -1.42
HERPUD1-207ENST00000563781 RGL4Q8IZJ4 473 aa6.2□□□□□ -1.42
HERPUD1-207ENST00000563781 TGFBRAP1Q8WUH2 860 aa6.2□□□□□ -1.42
HERPUD1-207ENST00000563781 SDR42E1Q8WUS8 393 aa6.2□□□□□ -1.42
HERPUD1-207ENST00000563781 RUFY2Q8WXA3 655 aa6.2□□□□□ -1.42
HERPUD1-207ENST00000563781 ABHD17AQ96GS6 310 aa6.2□□□□□ -1.42
HERPUD1-207ENST00000563781 TEPSINQ96N21 525 aa6.2□□□□□ -1.42
HERPUD1-207ENST00000563781 NOL10Q9BSC4 688 aaKnown RBP6.2□□□□□ -1.42
HERPUD1-207ENST00000563781 CRNKL1Q9BZJ0 848 aaKnown RBP6.2□□□□□ -1.42
HERPUD1-207ENST00000563781 LSG1Q9H089 658 aaKnown RBP6.2□□□□□ -1.42
HERPUD1-207ENST00000563781 VEZTQ9HBM0 779 aa6.2□□□□□ -1.42
HERPUD1-207ENST00000563781 DCP1AQ9NPI6 582 aaPredicted RBP6.2□□□□□ -1.42
HERPUD1-207ENST00000563781 SCAF8Q9UPN6 1271 aaKnown RBP6.2□□□□□ -1.42
HERPUD1-207ENST00000563781 ATRNL1Q5VV63 1379 aa6.19□□□□□ -1.42
HERPUD1-207ENST00000563781 RPAP1Q9BWH6 1393 aaPredicted RBP6.19□□□□□ -1.42
HERPUD1-207ENST00000563781 SSC5DA1L4H1 1573 aa6.19□□□□□ -1.42
HERPUD1-207ENST00000563781 DDTLA6NHG4 134 aaPredicted RBP6.19□□□□□ -1.42
HERPUD1-207ENST00000563781 TCP10L2B9ZVM9 353 aa6.19□□□□□ -1.42
HERPUD1-207ENST00000563781 ADM5C9JUS6 153 aa6.19□□□□□ -1.42
HERPUD1-207ENST00000563781 H3BRB1 525 aa6.19□□□□□ -1.42
HERPUD1-207ENST00000563781 SMIM22K7EJ46 135 aa6.19□□□□□ -1.42
HERPUD1-207ENST00000563781 KHNYNO15037 678 aaKnown RBP6.19□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms