RNA–Protein interactions for RNA: ENST00000563510.5

FANCA-211, Transcript of FA complementation group A, humanhuman

TSL 5

Gene FANCA, Length 633 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FANCA-211ENST00000563510 LRRCC1Q9C099 1032 aa12.77□□□□□ -0.37
FANCA-211ENST00000563510 ABHD16BQ9H3Z7 469 aa12.77□□□□□ -0.37
FANCA-211ENST00000563510 LCTP09848 1927 aa12.77□□□□□ -0.37
FANCA-211ENST00000563510 A0A0U1RQG5 324 aaPredicted RBP12.76□□□□□ -0.37
FANCA-211ENST00000563510 TLR3O15455 904 aaKnown RBP12.76□□□□□ -0.37
FANCA-211ENST00000563510 SNAI1O95863 264 aaPredicted RBP12.76□□□□□ -0.37
FANCA-211ENST00000563510 FDX1P10109 184 aa12.76□□□□□ -0.37
FANCA-211ENST00000563510 ACVR2BQ13705 512 aa12.76□□□□□ -0.37
FANCA-211ENST00000563510 PSRC1Q6PGN9 363 aaPredicted RBP12.76□□□□□ -0.37
FANCA-211ENST00000563510 CPXCR1Q8N123 301 aa12.76□□□□□ -0.37
FANCA-211ENST00000563510 ANKRD35Q8N283 1001 aa12.76□□□□□ -0.37
FANCA-211ENST00000563510 TMEM199Q8N511 208 aa12.76□□□□□ -0.37
FANCA-211ENST00000563510 CHST13Q8NET6 341 aa12.76□□□□□ -0.37
FANCA-211ENST00000563510 TIFAQ96CG3 184 aa12.76□□□□□ -0.37
FANCA-211ENST00000563510 GPATCH3Q96I76 525 aa12.76□□□□□ -0.37
FANCA-211ENST00000563510 STRBPQ96SI9 672 aaKnown RBP12.76□□□□□ -0.37
FANCA-211ENST00000563510 GAS2L1Q99501 681 aaPredicted RBP12.76□□□□□ -0.37
FANCA-211ENST00000563510 GNL3Q9BVP2 549 aaKnown RBP eCLIP12.76□□□□□ -0.37
FANCA-211ENST00000563510 UPF3AQ9H1J1 476 aaKnown RBP12.76□□□□□ -0.37
FANCA-211ENST00000563510 ZNF576Q9H609 170 aa12.76□□□□□ -0.37
FANCA-211ENST00000563510 CDHR5Q9HBB8 845 aa12.76□□□□□ -0.37
FANCA-211ENST00000563510 PRDM6Q9NQX0 595 aa12.76□□□□□ -0.37
FANCA-211ENST00000563510 NPDC1Q9NQX5 325 aaPredicted RBP12.76□□□□□ -0.37
FANCA-211ENST00000563510 CDKN2AIPQ9NXV6 580 aaPredicted RBP12.76□□□□□ -0.37
FANCA-211ENST00000563510 EIF2AK3Q9NZJ5 1116 aaKnown RBP12.76□□□□□ -0.37
FANCA-211ENST00000563510 FEM1BQ9UK73 627 aa12.76□□□□□ -0.37
FANCA-211ENST00000563510 COG6Q9Y2V7 657 aa12.76□□□□□ -0.37
FANCA-211ENST00000563510 MAP3K7O43318 606 aa12.75□□□□□ -0.37
FANCA-211ENST00000563510 CHGBP05060 677 aa12.75□□□□□ -0.37
FANCA-211ENST00000563510 ASGR1P07306 291 aa12.75□□□□□ -0.37
FANCA-211ENST00000563510 GNAT2P19087 354 aa12.75□□□□□ -0.37
FANCA-211ENST00000563510 SLC4A3P48751 1232 aa12.75□□□□□ -0.37
FANCA-211ENST00000563510 GJA9P57773 515 aa12.75□□□□□ -0.37
FANCA-211ENST00000563510 GRIN2CQ14957 1233 aa12.75□□□□□ -0.37
FANCA-211ENST00000563510 TJAP1Q5JTD0 557 aa12.75□□□□□ -0.37
FANCA-211ENST00000563510 ARMCX2Q7L311 632 aa12.75□□□□□ -0.37
FANCA-211ENST00000563510 APPBP2Q92624 585 aa12.75□□□□□ -0.37
FANCA-211ENST00000563510 KIFC2Q96AC6 838 aa12.75□□□□□ -0.37
FANCA-211ENST00000563510 VTI1AQ96AJ9 217 aa12.75□□□□□ -0.37
FANCA-211ENST00000563510 PLIN4Q96Q06 1357 aa12.75□□□□□ -0.37
FANCA-211ENST00000563510 BUD13Q9BRD0 619 aaKnown RBP eCLIP12.75□□□□□ -0.374e-11■□□□□ 10.5
FANCA-211ENST00000563510 MTIF3Q9H2K0 278 aaKnown RBP12.75□□□□□ -0.37
FANCA-211ENST00000563510 SLC38A10Q9HBR0 1119 aa12.75□□□□□ -0.37
FANCA-211ENST00000563510 RIPK3Q9Y572 518 aa12.75□□□□□ -0.37
FANCA-211ENST00000563510 TANC1Q9C0D5 1861 aa12.74□□□□□ -0.37
FANCA-211ENST00000563510 TRANK1O15050 2925 aa12.74□□□□□ -0.37
FANCA-211ENST00000563510 IGKV6D-41A0A0C4DH26 115 aa12.74□□□□□ -0.37
FANCA-211ENST00000563510 MYADML2A6NDP7 307 aa12.74□□□□□ -0.37
FANCA-211ENST00000563510 GSG1L2A8MUP6 293 aa12.74□□□□□ -0.37
FANCA-211ENST00000563510 MINDY4BA8MYZ0 360 aa12.74□□□□□ -0.37
FANCA-211ENST00000563510 ARVCFO00192 962 aa12.74□□□□□ -0.37
FANCA-211ENST00000563510 ZFYP08048 801 aaPredicted RBP12.74□□□□□ -0.37
FANCA-211ENST00000563510 TDO2P48775 406 aa12.74□□□□□ -0.37
FANCA-211ENST00000563510 CDK7P50613 346 aa12.74□□□□□ -0.37
FANCA-211ENST00000563510 LRRFIP1Q32MZ4 808 aaKnown RBP12.74□□□□□ -0.37
FANCA-211ENST00000563510 CCDC144BQ3MJ40 725 aa12.74□□□□□ -0.37
FANCA-211ENST00000563510 GNASQ5JWF2 1037 aa12.74□□□□□ -0.37
FANCA-211ENST00000563510 CCDC129Q6ZRS4 1044 aa12.74□□□□□ -0.37
FANCA-211ENST00000563510 ZNF444Q8N0Y2 327 aaPredicted RBP12.74□□□□□ -0.37
FANCA-211ENST00000563510 KBTBD3Q8NAB2 608 aa12.74□□□□□ -0.37
FANCA-211ENST00000563510 GMCL1P1Q8NEA9 526 aa12.74□□□□□ -0.37
FANCA-211ENST00000563510 RAVER2Q9HCJ3 691 aaKnown RBP12.74□□□□□ -0.37
FANCA-211ENST00000563510 ECHDC1Q9NTX5 307 aa12.74□□□□□ -0.37
FANCA-211ENST00000563510 CLIP2Q9UDT6 1046 aa12.74□□□□□ -0.37
FANCA-211ENST00000563510 PCDHGA10Q9Y5H3 936 aa12.74□□□□□ -0.37
FANCA-211ENST00000563510 NCOR1O75376 2440 aa12.73□□□□□ -0.37
FANCA-211ENST00000563510 TTLL1O95922 423 aa12.73□□□□□ -0.37
FANCA-211ENST00000563510 NKX3-2P78367 333 aa12.73□□□□□ -0.37
FANCA-211ENST00000563510 RAB30Q15771 203 aa12.73□□□□□ -0.37
FANCA-211ENST00000563510 TMEM240Q5SV17 173 aa12.73□□□□□ -0.37
FANCA-211ENST00000563510 RASIP1Q5U651 963 aa12.73□□□□□ -0.37
FANCA-211ENST00000563510 FAM126BQ8IXS8 530 aa12.73□□□□□ -0.37
FANCA-211ENST00000563510 CCDC144CPQ8IYA2 1237 aa12.73□□□□□ -0.37
FANCA-211ENST00000563510 MKL1Q969V6 931 aa12.73□□□□□ -0.37
FANCA-211ENST00000563510 CEP95Q96GE4 821 aa12.73□□□□□ -0.37
FANCA-211ENST00000563510 SEZ6LQ9BYH1 1024 aa12.73□□□□□ -0.37
FANCA-211ENST00000563510 ACAD9Q9H845 621 aa12.73□□□□□ -0.37
FANCA-211ENST00000563510 MTMR4Q9NYA4 1195 aa12.73□□□□□ -0.37
FANCA-211ENST00000563510 PCDHGA4Q9Y5G9 962 aa12.73□□□□□ -0.37
FANCA-211ENST00000563510 ASB14A6NK59 587 aa12.72□□□□□ -0.37
FANCA-211ENST00000563510 GPAA1O43292 621 aa12.72□□□□□ -0.37
FANCA-211ENST00000563510 ADCY6O43306 1168 aa12.72□□□□□ -0.37
FANCA-211ENST00000563510 CABYRO75952 493 aa12.72□□□□□ -0.37
FANCA-211ENST00000563510 CSF2RAP15509 400 aa12.72□□□□□ -0.37
FANCA-211ENST00000563510 STAT2P52630 851 aa12.72□□□□□ -0.37
FANCA-211ENST00000563510 PPP4R3BQ5MIZ7 849 aa12.72□□□□□ -0.37
FANCA-211ENST00000563510 AKNAD1Q5T1N1 836 aa12.72□□□□□ -0.37
FANCA-211ENST00000563510 STK11IPQ8N1F8 1099 aa12.72□□□□□ -0.37
FANCA-211ENST00000563510 FGD4Q96M96 766 aa12.72□□□□□ -0.37
FANCA-211ENST00000563510 PBX4Q9BYU1 374 aa12.72□□□□□ -0.37
FANCA-211ENST00000563510 PPP1R12CQ9BZL4 782 aa12.72□□□□□ -0.37
FANCA-211ENST00000563510 MSRAQ9UJ68 235 aa12.72□□□□□ -0.37
FANCA-211ENST00000563510 CHD7Q9P2D1 2997 aa12.72□□□□□ -0.37
FANCA-211ENST00000563510 BDP1A6H8Y1 2624 aa12.71□□□□□ -0.37
FANCA-211ENST00000563510 TNFRSF10AO00220 468 aa12.71□□□□□ -0.37
FANCA-211ENST00000563510 RNF113AO15541 343 aaKnown RBP12.71□□□□□ -0.37
FANCA-211ENST00000563510 APPP05067 770 aa12.71□□□□□ -0.37
FANCA-211ENST00000563510 SLC3A2P08195 630 aaKnown RBP12.71□□□□□ -0.37
FANCA-211ENST00000563510 TSPY3P0CV98 308 aa12.71□□□□□ -0.37
FANCA-211ENST00000563510 TSPY8P0CW00 308 aa12.71□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 94.8 ms