RNA–Protein interactions for RNA: ENST00000563293.1

RPAP1-205, Transcript of RNA polymerase II associated protein 1, humanhuman

TSL 3

Gene RPAP1, Length 499 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAP1-205ENST00000563293 GNL3Q9BVP2 549 aaKnown RBP eCLIP11.12□□□□□ -0.63
RPAP1-205ENST00000563293 ARMT1Q9H993 441 aa11.12□□□□□ -0.63
RPAP1-205ENST00000563293 ZHX1Q9UKY1 873 aaPredicted RBP11.12□□□□□ -0.63
RPAP1-205ENST00000563293 FAM184BQ9ULE4 1060 aa11.12□□□□□ -0.63
RPAP1-205ENST00000563293 PPP1R9AQ9ULJ8 1098 aa11.12□□□□□ -0.63
RPAP1-205ENST00000563293 CNPY2Q9Y2B0 182 aa11.12□□□□□ -0.63
RPAP1-205ENST00000563293 MYH7P12883 1935 aa11.11□□□□□ -0.63
RPAP1-205ENST00000563293 DNAJC25-GNG10A0A024R161 153 aa11.11□□□□□ -0.63
RPAP1-205ENST00000563293 ARVCFO00192 962 aa11.11□□□□□ -0.63
RPAP1-205ENST00000563293 DUSP11O75319 330 aaKnown RBP11.11□□□□□ -0.63
RPAP1-205ENST00000563293 CD4P01730 458 aa11.11□□□□□ -0.63
RPAP1-205ENST00000563293 APPP05067 770 aa11.11□□□□□ -0.63
RPAP1-205ENST00000563293 C6orf222P0C671 652 aaPredicted RBP11.11□□□□□ -0.63
RPAP1-205ENST00000563293 PCP11498 1178 aaKnown RBP11.11□□□□□ -0.63
RPAP1-205ENST00000563293 CDK8P49336 464 aa11.11□□□□□ -0.63
RPAP1-205ENST00000563293 BEX3Q00994 111 aa11.11□□□□□ -0.63
RPAP1-205ENST00000563293 NECTIN1Q15223 517 aa11.11□□□□□ -0.63
RPAP1-205ENST00000563293 IMMTQ16891 758 aaKnown RBP11.11□□□□□ -0.63
RPAP1-205ENST00000563293 KRT40Q6A162 431 aa11.11□□□□□ -0.63
RPAP1-205ENST00000563293 MAMDC4Q6UXC1 1216 aa11.11□□□□□ -0.63
RPAP1-205ENST00000563293 AMOTL1Q8IY63 956 aa11.11□□□□□ -0.63
RPAP1-205ENST00000563293 TMEM199Q8N511 208 aa11.11□□□□□ -0.63
RPAP1-205ENST00000563293 VTI1AQ96AJ9 217 aa11.11□□□□□ -0.63
RPAP1-205ENST00000563293 GLT1D1Q96MS3 346 aa11.11□□□□□ -0.63
RPAP1-205ENST00000563293 LRFN3Q9BTN0 628 aa11.11□□□□□ -0.63
RPAP1-205ENST00000563293 IL25Q9H293 177 aa11.11□□□□□ -0.63
RPAP1-205ENST00000563293 ARHGEF10LQ9HCE6 1279 aa11.11□□□□□ -0.63
RPAP1-205ENST00000563293 IL23AQ9NPF7 189 aa11.11□□□□□ -0.63
RPAP1-205ENST00000563293 MSRAQ9UJ68 235 aa11.11□□□□□ -0.63
RPAP1-205ENST00000563293 SLC4A4Q9Y6R1 1079 aa11.11□□□□□ -0.63
RPAP1-205ENST00000563293 DDX49Q9Y6V7 483 aaKnown RBP11.11□□□□□ -0.63
RPAP1-205ENST00000563293 WDFY4Q6ZS81 3184 aa11.11□□□□□ -0.63
RPAP1-205ENST00000563293 ASTN1O14525 1302 aa11.1□□□□□ -0.63
RPAP1-205ENST00000563293 GRIN2DO15399 1336 aa11.1□□□□□ -0.63
RPAP1-205ENST00000563293 ELP1O95163 1332 aa11.1□□□□□ -0.63
RPAP1-205ENST00000563293 MUC6Q6W4X9 2439 aa11.1□□□□□ -0.63
RPAP1-205ENST00000563293 C11orf97A0A1B0GVM6 126 aaPredicted RBP11.1□□□□□ -0.63
RPAP1-205ENST00000563293 EPOPA6NHQ4 379 aa11.1□□□□□ -0.63
RPAP1-205ENST00000563293 RAD21O60216 631 aa11.1□□□□□ -0.63
RPAP1-205ENST00000563293 PSMA5P28066 241 aa11.1□□□□□ -0.63
RPAP1-205ENST00000563293 CST5P28325 142 aaPredicted RBP11.1□□□□□ -0.63
RPAP1-205ENST00000563293 SLC4A3P48751 1232 aa11.1□□□□□ -0.63
RPAP1-205ENST00000563293 CCL23P55773 120 aa11.1□□□□□ -0.63
RPAP1-205ENST00000563293 GJA9P57773 515 aa11.1□□□□□ -0.63
RPAP1-205ENST00000563293 PTH1RQ03431 593 aa11.1□□□□□ -0.63
RPAP1-205ENST00000563293 ACVR2BQ13705 512 aa11.1□□□□□ -0.63
RPAP1-205ENST00000563293 CCDC144BQ3MJ40 725 aa11.1□□□□□ -0.63
RPAP1-205ENST00000563293 GNASQ5JWF2 1037 aa11.1□□□□□ -0.63
RPAP1-205ENST00000563293 PSRC1Q6PGN9 363 aaPredicted RBP11.1□□□□□ -0.63
RPAP1-205ENST00000563293 IFNL3Q8IZI9 196 aa11.1□□□□□ -0.63
RPAP1-205ENST00000563293 KATNBL1Q9H079 304 aa11.1□□□□□ -0.63
RPAP1-205ENST00000563293 NAPBQ9H115 298 aa11.1□□□□□ -0.63
RPAP1-205ENST00000563293 UPF3AQ9H1J1 476 aaKnown RBP11.1□□□□□ -0.63
RPAP1-205ENST00000563293 RBM8AQ9Y5S9 174 aaKnown RBP11.1□□□□□ -0.63
RPAP1-205ENST00000563293 BRWD1Q9NSI6 2320 aa11.1□□□□□ -0.63
RPAP1-205ENST00000563293 SYNGAP1Q96PV0 1343 aa11.09□□□□□ -0.63
RPAP1-205ENST00000563293 PIEZO1Q92508 2521 aa11.09□□□□□ -0.63
RPAP1-205ENST00000563293 A0A0U1RQG5 324 aaPredicted RBP11.09□□□□□ -0.63
RPAP1-205ENST00000563293 GSG1L2A8MUP6 293 aa11.09□□□□□ -0.63
RPAP1-205ENST00000563293 ZNF213O14771 459 aa11.09□□□□□ -0.63
RPAP1-205ENST00000563293 FGAP02671 866 aa11.09□□□□□ -0.63
RPAP1-205ENST00000563293 FGBP02675 491 aa11.09□□□□□ -0.63
RPAP1-205ENST00000563293 SLC3A2P08195 630 aaKnown RBP11.09□□□□□ -0.63
RPAP1-205ENST00000563293 HMGB1P09429 215 aaKnown RBP11.09□□□□□ -0.63
RPAP1-205ENST00000563293 TDO2P48775 406 aa11.09□□□□□ -0.63
RPAP1-205ENST00000563293 RAB30Q15771 203 aa11.09□□□□□ -0.63
RPAP1-205ENST00000563293 SBK1Q52WX2 424 aa11.09□□□□□ -0.63
RPAP1-205ENST00000563293 TMEM63BQ5T3F8 832 aa11.09□□□□□ -0.63
RPAP1-205ENST00000563293 C12orf60Q5U649 245 aa11.09□□□□□ -0.63
RPAP1-205ENST00000563293 SNRNP48Q6IEG0 339 aaKnown RBP11.09□□□□□ -0.63
RPAP1-205ENST00000563293 TM6SF1Q9BZW5 370 aa11.09□□□□□ -0.63
RPAP1-205ENST00000563293 TRPV6Q9H1D0 765 aa11.09□□□□□ -0.63
RPAP1-205ENST00000563293 WNT8AQ9H1J5 351 aa11.09□□□□□ -0.63
RPAP1-205ENST00000563293 CERS4Q9HA82 394 aa11.09□□□□□ -0.63
RPAP1-205ENST00000563293 SLC28A3Q9HAS3 691 aa11.09□□□□□ -0.63
RPAP1-205ENST00000563293 C11orf16Q9NQ32 467 aa11.09□□□□□ -0.63
RPAP1-205ENST00000563293 CDKN2AIPQ9NXV6 580 aaPredicted RBP11.09□□□□□ -0.63
RPAP1-205ENST00000563293 ARPP21Q9UBL0 812 aaPredicted RBP11.09□□□□□ -0.63
RPAP1-205ENST00000563293 SWAP70Q9UH65 585 aa11.09□□□□□ -0.63
RPAP1-205ENST00000563293 MROH7Q68CQ1 1323 aa11.09□□□□□ -0.63
RPAP1-205ENST00000563293 USP17L12C9JPN9 530 aa11.08□□□□□ -0.64
RPAP1-205ENST00000563293 USP17L21D6R901 530 aa11.08□□□□□ -0.64
RPAP1-205ENST00000563293 ARHGEF15O94989 841 aa11.08□□□□□ -0.64
RPAP1-205ENST00000563293 VPS53Q5VIR6 699 aa11.08□□□□□ -0.64
RPAP1-205ENST00000563293 CREB3L3Q68CJ9 461 aa11.08□□□□□ -0.64
RPAP1-205ENST00000563293 CXCL17Q6UXB2 119 aa11.08□□□□□ -0.64
RPAP1-205ENST00000563293 CPXCR1Q8N123 301 aa11.08□□□□□ -0.64
RPAP1-205ENST00000563293 MSL3Q8N5Y2 521 aaKnown RBP11.08□□□□□ -0.64
RPAP1-205ENST00000563293 SLC43A3Q8NBI5 491 aa11.08□□□□□ -0.64
RPAP1-205ENST00000563293 DDX11Q96FC9 970 aa11.08□□□□□ -0.64
RPAP1-205ENST00000563293 SCLYQ96I15 445 aa11.08□□□□□ -0.64
RPAP1-205ENST00000563293 C1QTNF1Q9BXJ1 281 aa11.08□□□□□ -0.64
RPAP1-205ENST00000563293 RNF41Q9H4P4 317 aaPredicted RBP11.08□□□□□ -0.64
RPAP1-205ENST00000563293 ZNF287Q9HBT7 754 aa11.08□□□□□ -0.64
RPAP1-205ENST00000563293 ANAPC4Q9UJX5 808 aa11.08□□□□□ -0.64
RPAP1-205ENST00000563293 MTCH2Q9Y6C9 303 aa11.08□□□□□ -0.64
RPAP1-205ENST00000563293 SCN5AQ14524 2016 aa11.08□□□□□ -0.64
RPAP1-205ENST00000563293 FAM86C2PA6NEL3 165 aa11.07□□□□□ -0.64
RPAP1-205ENST00000563293 SLC27A2O14975 620 aa11.07□□□□□ -0.64
RPAP1-205ENST00000563293 TLL1O43897 1013 aa11.07□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms