RNA–Protein interactions for RNA: ENST00000562998.1

CDH11-206, Transcript of cadherin 11, humanhuman

TSL 4

Gene CDH11, Length 568 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH11-206ENST00000562998 CNTN2Q02246 1040 aa21.78■■□□□ 1.08
CDH11-206ENST00000562998 CDC37Q16543 378 aaPredicted RBP21.78■■□□□ 1.08
CDH11-206ENST00000562998 DHX32Q7L7V1 743 aaKnown RBP21.78■■□□□ 1.08
CDH11-206ENST00000562998 CATIPQ7Z7H3 387 aa21.78■■□□□ 1.08
CDH11-206ENST00000562998 ZNF654Q8IZM8 581 aa21.78■■□□□ 1.08
CDH11-206ENST00000562998 USP26Q9BXU7 913 aa21.78■■□□□ 1.08
CDH11-206ENST00000562998 ASTN1O14525 1302 aa21.78■■□□□ 1.08
CDH11-206ENST00000562998 SYNGAP1Q96PV0 1343 aa21.78■■□□□ 1.08
CDH11-206ENST00000562998 NFIBO00712 420 aa21.77■■□□□ 1.08
CDH11-206ENST00000562998 CYTH3O43739 400 aa21.77■■□□□ 1.08
CDH11-206ENST00000562998 SNAI1O95863 264 aaPredicted RBP21.77■■□□□ 1.08
CDH11-206ENST00000562998 QRICH1Q2TAL8 776 aa21.77■■□□□ 1.08
CDH11-206ENST00000562998 SOWAHBA6NEL2 793 aa21.76■■□□□ 1.07
CDH11-206ENST00000562998 TFRCP02786 760 aaKnown RBP21.76■■□□□ 1.07
CDH11-206ENST00000562998 PRAMEF19Q5SWL8 479 aa21.76■■□□□ 1.07
CDH11-206ENST00000562998 ANKLE1Q8NAG6 615 aa21.76■■□□□ 1.07
CDH11-206ENST00000562998 LRRC2Q9BYS8 371 aa21.76■■□□□ 1.07
CDH11-206ENST00000562998 MAF1Q9H063 256 aa21.76■■□□□ 1.07
CDH11-206ENST00000562998 DDX20Q9UHI6 824 aaKnown RBP21.76■■□□□ 1.07
CDH11-206ENST00000562998 POTEB2H3BUK9 544 aa21.75■■□□□ 1.07
CDH11-206ENST00000562998 SEPT4O43236 478 aa21.75■■□□□ 1.07
CDH11-206ENST00000562998 MSCO60682 206 aa21.75■■□□□ 1.07
CDH11-206ENST00000562998 HMGB1P09429 215 aaKnown RBP21.75■■□□□ 1.07
CDH11-206ENST00000562998 ZNF865P0CJ78 1059 aaPredicted RBP21.75■■□□□ 1.07
CDH11-206ENST00000562998 RGS22Q8NE09 1264 aa21.75■■□□□ 1.07
CDH11-206ENST00000562998 MYL10Q9BUA6 226 aa21.75■■□□□ 1.07
CDH11-206ENST00000562998 MYH6P13533 1939 aa21.74■■□□□ 1.07
CDH11-206ENST00000562998 ZBTB5O15062 677 aa21.74■■□□□ 1.07
CDH11-206ENST00000562998 PPP1R11O60927 126 aaPredicted RBP21.74■■□□□ 1.07
CDH11-206ENST00000562998 SMARCA1P28370 1054 aa21.74■■□□□ 1.07
CDH11-206ENST00000562998 BAATQ14032 418 aaPredicted RBP21.74■■□□□ 1.07
CDH11-206ENST00000562998 FBXL16Q8N461 479 aa21.74■■□□□ 1.07
CDH11-206ENST00000562998 KATNBL1Q9H079 304 aa21.74■■□□□ 1.07
CDH11-206ENST00000562998 VAT1LQ9HCJ6 419 aa21.74■■□□□ 1.07
CDH11-206ENST00000562998 ABCB11O95342 1321 aa21.74■■□□□ 1.07
CDH11-206ENST00000562998 MCM3APO60318 1980 aa21.74■■□□□ 1.07
CDH11-206ENST00000562998 CCDC69A6NI79 296 aa21.73■■□□□ 1.07
CDH11-206ENST00000562998 NSMFQ6X4W1 530 aa21.73■■□□□ 1.07
CDH11-206ENST00000562998 FBXO11Q86XK2 927 aa21.73■■□□□ 1.07
CDH11-206ENST00000562998 MORC4Q8TE76 937 aa21.73■■□□□ 1.07
CDH11-206ENST00000562998 TCEANC2Q96MN5 208 aa21.73■■□□□ 1.07
CDH11-206ENST00000562998 SPZ1Q9BXG8 430 aa21.73■■□□□ 1.07
CDH11-206ENST00000562998 PDE4DIPQ5VU43 2346 aa21.73■■□□□ 1.07
CDH11-206ENST00000562998 BAZ2BQ9UIF8 2168 aaKnown RBP21.72■■□□□ 1.07
CDH11-206ENST00000562998 OPLAHO14841 1288 aa21.72■■□□□ 1.07
CDH11-206ENST00000562998 FARP2O94887 1054 aaPredicted RBP21.72■■□□□ 1.07
CDH11-206ENST00000562998 CALM1P0DP23 149 aa21.72■■□□□ 1.07
CDH11-206ENST00000562998 CALM2P0DP24 149 aa21.72■■□□□ 1.07
CDH11-206ENST00000562998 CALM3P0DP25 149 aa21.72■■□□□ 1.07
CDH11-206ENST00000562998 KIF5BP33176 963 aa21.72■■□□□ 1.07
CDH11-206ENST00000562998 GHRHRQ02643 423 aa21.72■■□□□ 1.07
CDH11-206ENST00000562998 USH1GQ495M9 461 aa21.72■■□□□ 1.07
CDH11-206ENST00000562998 APOA5Q6Q788 366 aa21.72■■□□□ 1.07
CDH11-206ENST00000562998 NFXL1Q6ZNB6 911 aa21.72■■□□□ 1.07
CDH11-206ENST00000562998 ARMCX2Q7L311 632 aa21.72■■□□□ 1.07
CDH11-206ENST00000562998 CCDC144CPQ8IYA2 1237 aa21.72■■□□□ 1.07
CDH11-206ENST00000562998 NUP133Q8WUM0 1156 aa21.72■■□□□ 1.07
CDH11-206ENST00000562998 JAKMIP1Q96N16 626 aaKnown RBP21.72■■□□□ 1.07
CDH11-206ENST00000562998 PURBQ96QR8 312 aaKnown RBP21.72■■□□□ 1.07
CDH11-206ENST00000562998 AMNQ9BXJ7 453 aa21.72■■□□□ 1.07
CDH11-206ENST00000562998 AGXT2Q9BYV1 514 aa21.72■■□□□ 1.07
CDH11-206ENST00000562998 CDKN2AIPQ9NXV6 580 aaPredicted RBP21.72■■□□□ 1.07
CDH11-206ENST00000562998 BRPF3Q9ULD4 1205 aa21.72■■□□□ 1.07
CDH11-206ENST00000562998 LOC102724159A0A0B4J2E5 919 aa21.71■■□□□ 1.07
CDH11-206ENST00000562998 DHX16O60231 1041 aaKnown RBP21.71■■□□□ 1.07
CDH11-206ENST00000562998 CPA1P15085 419 aa21.71■■□□□ 1.07
CDH11-206ENST00000562998 CNGA1P29973 690 aa21.71■■□□□ 1.07
CDH11-206ENST00000562998 RPS6P62753 249 aaKnown RBP21.71■■□□□ 1.07
CDH11-206ENST00000562998 PWP2Q15269 919 aaKnown RBP21.71■■□□□ 1.07
CDH11-206ENST00000562998 SLC30A10Q6XR72 485 aa21.71■■□□□ 1.07
CDH11-206ENST00000562998 CTCFLQ8NI51 663 aaPredicted RBP21.71■■□□□ 1.07
CDH11-206ENST00000562998 PIGSQ96S52 555 aa21.71■■□□□ 1.07
CDH11-206ENST00000562998 CNPY2Q9Y2B0 182 aa21.71■■□□□ 1.07
CDH11-206ENST00000562998 SLC12A7Q9Y666 1083 aa21.71■■□□□ 1.07
CDH11-206ENST00000562998 LRRC37A2A6NM11 1700 aa21.71■■□□□ 1.07
CDH11-206ENST00000562998 COL6A1P12109 1028 aa21.7■■□□□ 1.06
CDH11-206ENST00000562998 RXRAP19793 462 aa21.7■■□□□ 1.06
CDH11-206ENST00000562998 RNF207Q6ZRF8 634 aa21.7■■□□□ 1.06
CDH11-206ENST00000562998 SRBD1Q8N5C6 995 aaKnown RBP21.7■■□□□ 1.06
CDH11-206ENST00000562998 FANCBQ8NB91 859 aa21.7■■□□□ 1.06
CDH11-206ENST00000562998 DIS3LQ8TF46 1054 aaKnown RBP21.7■■□□□ 1.06
CDH11-206ENST00000562998 TBC1D5Q92609 795 aa21.7■■□□□ 1.06
CDH11-206ENST00000562998 LZTS2Q9BRK4 669 aa21.7■■□□□ 1.06
CDH11-206ENST00000562998 ABHD16BQ9H3Z7 469 aa21.7■■□□□ 1.06
CDH11-206ENST00000562998 PNMA6FA0A0J9YX94 578 aa21.69■■□□□ 1.06
CDH11-206ENST00000562998 PTPDC1A2A3K4 754 aa21.69■■□□□ 1.06
CDH11-206ENST00000562998 ASB14A6NK59 587 aa21.69■■□□□ 1.06
CDH11-206ENST00000562998 PLEKHA8P1O95397 391 aa21.69■■□□□ 1.06
CDH11-206ENST00000562998 RPS6KB1P23443 525 aa21.69■■□□□ 1.06
CDH11-206ENST00000562998 GNAQP50148 359 aa21.69■■□□□ 1.06
CDH11-206ENST00000562998 RCAN1P53805 252 aa21.69■■□□□ 1.06
CDH11-206ENST00000562998 ACVR2BQ13705 512 aa21.69■■□□□ 1.06
CDH11-206ENST00000562998 BLOC1S2Q6QNY1 142 aa21.69■■□□□ 1.06
CDH11-206ENST00000562998 PAWRQ96IZ0 340 aaKnown RBP21.69■■□□□ 1.06
CDH11-206ENST00000562998 ZSWIM6Q9HCJ5 1215 aa21.69■■□□□ 1.06
CDH11-206ENST00000562998 MRPL11Q9Y3B7 192 aaKnown RBP21.69■■□□□ 1.06
CDH11-206ENST00000562998 AKR1A1P14550 325 aa21.68■■□□□ 1.06
CDH11-206ENST00000562998 EDNRBP24530 442 aa21.68■■□□□ 1.06
CDH11-206ENST00000562998 PSMA5P28066 241 aa21.68■■□□□ 1.06
CDH11-206ENST00000562998 DNERQ8NFT8 737 aa21.68■■□□□ 1.06
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms