RNA–Protein interactions for RNA: ENST00000562875.5

KARS-203, Transcript of lysyl-tRNA synthetase, humanhuman

TSL 3

Gene KARS, Length 801 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KARS-203ENST00000562875 IFNL2Q8IZJ0 200 aa9.34□□□□□ -0.91
KARS-203ENST00000562875 METTL22Q9BUU2 404 aaPredicted RBP9.34□□□□□ -0.91
KARS-203ENST00000562875 CEP44Q9C0F1 390 aa9.34□□□□□ -0.91
KARS-203ENST00000562875 ZSCAN16Q9H4T2 348 aaPredicted RBP9.34□□□□□ -0.91
KARS-203ENST00000562875 SLC52A2Q9HAB3 445 aa9.34□□□□□ -0.91
KARS-203ENST00000562875 SRA1Q9HD15 236 aaKnown RBP9.34□□□□□ -0.91
KARS-203ENST00000562875 OSGEPQ9NPF4 335 aa9.34□□□□□ -0.91
KARS-203ENST00000562875 USP25Q9UHP3 1055 aa9.34□□□□□ -0.91
KARS-203ENST00000562875 CFAP45Q9UL16 551 aa9.34□□□□□ -0.91
KARS-203ENST00000562875 MED23Q9ULK4 1368 aa9.34□□□□□ -0.91
KARS-203ENST00000562875 NPHP3Q7Z494 1330 aa9.33□□□□□ -0.92
KARS-203ENST00000562875 ADCY5O95622 1261 aa9.33□□□□□ -0.92
KARS-203ENST00000562875 SNRPA1P09661 255 aaKnown RBP9.33□□□□□ -0.92
KARS-203ENST00000562875 ST13P50502 369 aaKnown RBP9.33□□□□□ -0.92
KARS-203ENST00000562875 GSTM4Q03013 218 aa9.33□□□□□ -0.92
KARS-203ENST00000562875 PTH1RQ03431 593 aa9.33□□□□□ -0.92
KARS-203ENST00000562875 ZNF790Q6PG37 636 aa9.33□□□□□ -0.92
KARS-203ENST00000562875 FMR1NBQ8N0W7 255 aaPredicted RBP9.33□□□□□ -0.92
KARS-203ENST00000562875 KLHL23Q8NBE8 558 aa9.33□□□□□ -0.92
KARS-203ENST00000562875 PIBF1Q8WXW3 757 aa9.33□□□□□ -0.92
KARS-203ENST00000562875 KLHDC7BQ96G42 594 aa9.33□□□□□ -0.92
KARS-203ENST00000562875 SPATA32Q96LK8 384 aa9.33□□□□□ -0.92
KARS-203ENST00000562875 FMNL2Q96PY5 1086 aa9.33□□□□□ -0.92
KARS-203ENST00000562875 MYD88Q99836 296 aa9.33□□□□□ -0.92
KARS-203ENST00000562875 CCDC8Q9H0W5 538 aaPredicted RBP9.33□□□□□ -0.92
KARS-203ENST00000562875 TNMDQ9H2S6 317 aa9.33□□□□□ -0.92
KARS-203ENST00000562875 BOLA2Q9H3K6 86 aa9.33□□□□□ -0.92
KARS-203ENST00000562875 SOX17Q9H6I2 414 aaPredicted RBP9.33□□□□□ -0.92
KARS-203ENST00000562875 TMEM39AQ9NV64 488 aa9.33□□□□□ -0.92
KARS-203ENST00000562875 PA2G4Q9UQ80 394 aaKnown RBP9.33□□□□□ -0.92
KARS-203ENST00000562875 MTMR6Q9Y217 621 aa9.33□□□□□ -0.92
KARS-203ENST00000562875 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP9.33□□□□□ -0.925e-9■□□□□ 9.8
KARS-203ENST00000562875 JCADQ9P266 1359 aa9.33□□□□□ -0.92
KARS-203ENST00000562875 MYH3P11055 1940 aa9.33□□□□□ -0.92
KARS-203ENST00000562875 PAPPAQ13219 1627 aa9.32□□□□□ -0.92
KARS-203ENST00000562875 TJP1Q07157 1748 aa9.32□□□□□ -0.92
KARS-203ENST00000562875 CTAGE5O15320 804 aa9.32□□□□□ -0.92
KARS-203ENST00000562875 HCLS1P14317 486 aaPredicted RBP9.32□□□□□ -0.92
KARS-203ENST00000562875 ATP5JP18859 108 aa9.32□□□□□ -0.92
KARS-203ENST00000562875 PPP2R3AQ06190 1150 aa9.32□□□□□ -0.92
KARS-203ENST00000562875 GCKRQ14397 625 aa9.32□□□□□ -0.92
KARS-203ENST00000562875 CCDC85BQ15834 202 aaPredicted RBP9.32□□□□□ -0.92
KARS-203ENST00000562875 ME3Q16798 604 aa9.32□□□□□ -0.92
KARS-203ENST00000562875 PRRT3Q5FWE3 981 aa9.32□□□□□ -0.92
KARS-203ENST00000562875 FBXO11Q86XK2 927 aa9.32□□□□□ -0.92
KARS-203ENST00000562875 GALNT11Q8NCW6 608 aa9.32□□□□□ -0.92
KARS-203ENST00000562875 BICD2Q8TD16 824 aa9.32□□□□□ -0.92
KARS-203ENST00000562875 DDX54Q8TDD1 881 aaKnown RBP9.32□□□□□ -0.92
KARS-203ENST00000562875 DCAF5Q96JK2 942 aa9.32□□□□□ -0.92
KARS-203ENST00000562875 NECAB3Q96P71 396 aaPredicted RBP9.32□□□□□ -0.92
KARS-203ENST00000562875 NEK1Q96PY6 1258 aa9.32□□□□□ -0.92
KARS-203ENST00000562875 LLPHQ9BRT6 129 aaKnown RBP9.32□□□□□ -0.92
KARS-203ENST00000562875 SIL1Q9H173 461 aa9.32□□□□□ -0.92
KARS-203ENST00000562875 IL25Q9H293 177 aa9.32□□□□□ -0.92
KARS-203ENST00000562875 COPRSQ9NQ92 184 aa9.32□□□□□ -0.92
KARS-203ENST00000562875 CHD4Q14839 1912 aa9.32□□□□□ -0.92
KARS-203ENST00000562875 C1orf167Q5SNV9 1468 aa9.32□□□□□ -0.92
KARS-203ENST00000562875 DCCP43146 1447 aa9.31□□□□□ -0.92
KARS-203ENST00000562875 ENC1O14682 589 aa9.31□□□□□ -0.92
KARS-203ENST00000562875 SASH1O94885 1247 aa9.31□□□□□ -0.92
KARS-203ENST00000562875 MYL6BP14649 208 aa9.31□□□□□ -0.92
KARS-203ENST00000562875 ADCK5Q3MIX3 580 aa9.31□□□□□ -0.92
KARS-203ENST00000562875 MCMDC2Q4G0Z9 681 aa9.31□□□□□ -0.92
KARS-203ENST00000562875 ATL3Q6DD88 541 aa9.31□□□□□ -0.92
KARS-203ENST00000562875 SV2BQ7L1I2 683 aa9.31□□□□□ -0.92
KARS-203ENST00000562875 ARHGAP30Q7Z6I6 1101 aaPredicted RBP9.31□□□□□ -0.92
KARS-203ENST00000562875 XAGE3Q8WTP9 111 aa9.31□□□□□ -0.92
KARS-203ENST00000562875 EAF2Q96CJ1 260 aaPredicted RBP9.31□□□□□ -0.92
KARS-203ENST00000562875 ZNF396Q96N95 335 aaPredicted RBP9.31□□□□□ -0.92
KARS-203ENST00000562875 PALLDQ8WX93 1383 aa9.31□□□□□ -0.92
KARS-203ENST00000562875 ANKRD36CQ5JPF3 1778 aa9.31□□□□□ -0.92
KARS-203ENST00000562875 SH3TC1Q8TE82 1336 aa9.31□□□□□ -0.92
KARS-203ENST00000562875 SCAMP3O14828 347 aaKnown RBP9.3□□□□□ -0.92
KARS-203ENST00000562875 LARGE1O95461 756 aa9.3□□□□□ -0.92
KARS-203ENST00000562875 CELA3AP09093 270 aa9.3□□□□□ -0.92
KARS-203ENST00000562875 PHKG2P15735 406 aa9.3□□□□□ -0.92
KARS-203ENST00000562875 ATF3P18847 181 aa9.3□□□□□ -0.92
KARS-203ENST00000562875 CD68P34810 354 aaPredicted RBP9.3□□□□□ -0.92
KARS-203ENST00000562875 NOLC1Q14978 699 aaKnown RBP eCLIP9.3□□□□□ -0.92
KARS-203ENST00000562875 SUZ12Q15022 739 aaKnown RBP9.3□□□□□ -0.92
KARS-203ENST00000562875 PROSER3Q2NL68 480 aa9.3□□□□□ -0.92
KARS-203ENST00000562875 TNNI3KQ59H18 835 aa9.3□□□□□ -0.92
KARS-203ENST00000562875 COPS6Q7L5N1 327 aa9.3□□□□□ -0.92
KARS-203ENST00000562875 DRC7Q8IY82 874 aa9.3□□□□□ -0.92
KARS-203ENST00000562875 FAM227BQ96M60 508 aa9.3□□□□□ -0.92
KARS-203ENST00000562875 HELLSQ9NRZ9 838 aa9.3□□□□□ -0.92
KARS-203ENST00000562875 STK17AQ9UEE5 414 aa9.3□□□□□ -0.92
KARS-203ENST00000562875 TPCN1Q9ULQ1 816 aa9.3□□□□□ -0.92
KARS-203ENST00000562875 FPGT-TNNI3KV9GXZ4 949 aa9.3□□□□□ -0.92
KARS-203ENST00000562875 KDM6AO15550 1401 aaPredicted RBP9.3□□□□□ -0.92
KARS-203ENST00000562875 A0A0D9SFI3 127 aa9.29□□□□□ -0.92
KARS-203ENST00000562875 GOLGA6L19H0YKK7 550 aa9.29□□□□□ -0.92
KARS-203ENST00000562875 TM4SF5O14894 197 aa9.29□□□□□ -0.92
KARS-203ENST00000562875 DDX3YO15523 660 aaKnown RBP9.29□□□□□ -0.92
KARS-203ENST00000562875 CPA1P15085 419 aa9.29□□□□□ -0.92
KARS-203ENST00000562875 NLRP12P59046 1061 aa9.29□□□□□ -0.92
KARS-203ENST00000562875 DHX8Q14562 1220 aaKnown RBP9.29□□□□□ -0.92
KARS-203ENST00000562875 ZRSR1Q15695 479 aaKnown RBP9.29□□□□□ -0.92
KARS-203ENST00000562875 GIMAP6Q6P9H5 292 aa9.29□□□□□ -0.92
KARS-203ENST00000562875 NECAB1Q8N987 351 aa9.29□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms