RNA–Protein interactions for RNA: ENST00000562866.1

VPS9D1-AS1-202, VPS9D1 antisense RNA 1, humanhuman

TSL 2 BASIC

Gene VPS9D1-AS1, Length 1,753 nt, Biotype antisense RNA, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS9D1-AS1-202ENST00000562866 TMEM266Q2M3C6 531 aa24.05■■□□□ 1.44
VPS9D1-AS1-202ENST00000562866 ANKRD20A12PQ8NF67 263 aa24.05■■□□□ 1.44
VPS9D1-AS1-202ENST00000562866 CAMKK2Q96RR4 588 aa24.05■■□□□ 1.44
VPS9D1-AS1-202ENST00000562866 DDTLA6NHG4 134 aaPredicted RBP24.04■■□□□ 1.44
VPS9D1-AS1-202ENST00000562866 CACNB3P54284 484 aa24.04■■□□□ 1.44
VPS9D1-AS1-202ENST00000562866 STIM1Q13586 685 aa24.04■■□□□ 1.44
VPS9D1-AS1-202ENST00000562866 TMEM179Q6ZVK1 233 aa24.04■■□□□ 1.44
VPS9D1-AS1-202ENST00000562866 CALML4Q96GE6 196 aa24.04■■□□□ 1.44
VPS9D1-AS1-202ENST00000562866 NAP1L4Q99733 375 aaKnown RBP24.04■■□□□ 1.44
VPS9D1-AS1-202ENST00000562866 RAB34Q9BZG1 259 aa24.04■■□□□ 1.44
VPS9D1-AS1-202ENST00000562866 COL2A1P02458 1487 aaPredicted RBP24.04■■□□□ 1.44
VPS9D1-AS1-202ENST00000562866 MYH4Q9Y623 1939 aa24.04■■□□□ 1.44
VPS9D1-AS1-202ENST00000562866 SCN9AQ15858 1988 aa24.04■■□□□ 1.44
VPS9D1-AS1-202ENST00000562866 EEF2P13639 858 aaKnown RBP24.03■■□□□ 1.44
VPS9D1-AS1-202ENST00000562866 AMPD3Q01432 767 aa24.03■■□□□ 1.44
VPS9D1-AS1-202ENST00000562866 EZH2Q15910 746 aaKnown RBP24.03■■□□□ 1.44
VPS9D1-AS1-202ENST00000562866 CALCRLQ16602 461 aa24.03■■□□□ 1.44
VPS9D1-AS1-202ENST00000562866 TTBK2Q6IQ55 1244 aa24.03■■□□□ 1.44
VPS9D1-AS1-202ENST00000562866 APTXQ7Z2E3 356 aaKnown RBP24.03■■□□□ 1.44
VPS9D1-AS1-202ENST00000562866 IGSF22Q8N9C0 903 aa24.03■■□□□ 1.44
VPS9D1-AS1-202ENST00000562866 NELFBQ8WX92 580 aa24.03■■□□□ 1.44
VPS9D1-AS1-202ENST00000562866 SIPA1L1O43166 1804 aa24.03■■□□□ 1.44
VPS9D1-AS1-202ENST00000562866 ATRNL1Q5VV63 1379 aa24.03■■□□□ 1.44
VPS9D1-AS1-202ENST00000562866 ARHGAP6O43182 974 aa24.03■■□□□ 1.44
VPS9D1-AS1-202ENST00000562866 PPIP5K2O43314 1243 aa24.03■■□□□ 1.44
VPS9D1-AS1-202ENST00000562866 PLCG1P19174 1290 aa24.03■■□□□ 1.44
VPS9D1-AS1-202ENST00000562866 FXR2P51116 673 aaKnown RBP eCLIP24.03■■□□□ 1.44
VPS9D1-AS1-202ENST00000562866 KCTD1Q719H9 257 aa24.03■■□□□ 1.44
VPS9D1-AS1-202ENST00000562866 PPP1R13BQ96KQ4 1090 aa24.03■■□□□ 1.44
VPS9D1-AS1-202ENST00000562866 MTMR9Q96QG7 549 aa24.03■■□□□ 1.44
VPS9D1-AS1-202ENST00000562866 ADD3Q9UEY8 706 aaKnown RBP24.03■■□□□ 1.44
VPS9D1-AS1-202ENST00000562866 PCDHAC2Q9Y5I4 1007 aa24.03■■□□□ 1.44
VPS9D1-AS1-202ENST00000562866 USP17L10C9JJH3 530 aa24.02■■□□□ 1.44
VPS9D1-AS1-202ENST00000562866 TECP42680 631 aa24.02■■□□□ 1.44
VPS9D1-AS1-202ENST00000562866 SLFN13Q68D06 897 aa24.02■■□□□ 1.44
VPS9D1-AS1-202ENST00000562866 SH3BP5LQ7L8J4 393 aa24.02■■□□□ 1.44
VPS9D1-AS1-202ENST00000562866 POTEDQ86YR6 584 aa24.02■■□□□ 1.44
VPS9D1-AS1-202ENST00000562866 LIMA1Q9UHB6 759 aaKnown RBP24.02■■□□□ 1.44
VPS9D1-AS1-202ENST00000562866 RHOBTB3O94955 611 aa24.01■■□□□ 1.43
VPS9D1-AS1-202ENST00000562866 SLC1A4P43007 532 aa24.01■■□□□ 1.43
VPS9D1-AS1-202ENST00000562866 CLK2P49760 499 aaKnown RBP24.01■■□□□ 1.43
VPS9D1-AS1-202ENST00000562866 KMT5BQ4FZB7 885 aa24.01■■□□□ 1.43
VPS9D1-AS1-202ENST00000562866 PPP4R3AQ6IN85 833 aa24.01■■□□□ 1.43
VPS9D1-AS1-202ENST00000562866 MTERF4Q7Z6M4 381 aaKnown RBP24.01■■□□□ 1.43
VPS9D1-AS1-202ENST00000562866 ADSSL1Q8N142 457 aa24.01■■□□□ 1.43
VPS9D1-AS1-202ENST00000562866 KIF18AQ8NI77 898 aa24.01■■□□□ 1.43
VPS9D1-AS1-202ENST00000562866 MAP7D2Q96T17 732 aa24.01■■□□□ 1.43
VPS9D1-AS1-202ENST00000562866 H7C1D1 291 aa24.01■■□□□ 1.43
VPS9D1-AS1-202ENST00000562866 STX10O60499 249 aa24.01■■□□□ 1.43
VPS9D1-AS1-202ENST00000562866 PPP1R11O60927 126 aaPredicted RBP24.01■■□□□ 1.43
VPS9D1-AS1-202ENST00000562866 GCFC2P16383 781 aaKnown RBP24.01■■□□□ 1.43
VPS9D1-AS1-202ENST00000562866 PPP1R2P41236 205 aa24.01■■□□□ 1.43
VPS9D1-AS1-202ENST00000562866 TNNI2P48788 182 aa24.01■■□□□ 1.43
VPS9D1-AS1-202ENST00000562866 ICA1Q05084 483 aa24.01■■□□□ 1.43
VPS9D1-AS1-202ENST00000562866 EN1Q05925 392 aaPredicted RBP24.01■■□□□ 1.43
VPS9D1-AS1-202ENST00000562866 PDIA5Q14554 519 aa24.01■■□□□ 1.43
VPS9D1-AS1-202ENST00000562866 ABCB5Q2M3G0 1257 aa24.01■■□□□ 1.43
VPS9D1-AS1-202ENST00000562866 BAG1Q99933 345 aaPredicted RBP24.01■■□□□ 1.43
VPS9D1-AS1-202ENST00000562866 C7orf25Q9BPX7 421 aa24.01■■□□□ 1.43
VPS9D1-AS1-202ENST00000562866 PSTPIP2Q9H939 334 aa24.01■■□□□ 1.43
VPS9D1-AS1-202ENST00000562866 ZSCAN12O43309 604 aa24■■□□□ 1.43
VPS9D1-AS1-202ENST00000562866 RRP9O43818 475 aaKnown RBP24■■□□□ 1.43
VPS9D1-AS1-202ENST00000562866 KLRC4O43908 158 aa24■■□□□ 1.43
VPS9D1-AS1-202ENST00000562866 SLC16A2P36021 539 aa24■■□□□ 1.43
VPS9D1-AS1-202ENST00000562866 TXKP42681 527 aa24■■□□□ 1.43
VPS9D1-AS1-202ENST00000562866 PRCPP42785 496 aa24■■□□□ 1.43
VPS9D1-AS1-202ENST00000562866 PPFIBP1Q86W92 1011 aa24■■□□□ 1.43
VPS9D1-AS1-202ENST00000562866 RTKN2Q8IZC4 609 aa24■■□□□ 1.43
VPS9D1-AS1-202ENST00000562866 ZNF592Q92610 1267 aa24■■□□□ 1.43
VPS9D1-AS1-202ENST00000562866 PLIN2Q99541 437 aa24■■□□□ 1.43
VPS9D1-AS1-202ENST00000562866 TMOD2Q9NZR1 351 aa24■■□□□ 1.43
VPS9D1-AS1-202ENST00000562866 STK17AQ9UEE5 414 aa24■■□□□ 1.43
VPS9D1-AS1-202ENST00000562866 LRWD1Q9UFC0 647 aa24■■□□□ 1.43
VPS9D1-AS1-202ENST00000562866 LRRC10BA6NIK2 292 aa23.99■■□□□ 1.43
VPS9D1-AS1-202ENST00000562866 CCDC93Q567U6 631 aa23.99■■□□□ 1.43
VPS9D1-AS1-202ENST00000562866 MCTP2Q6DN12 878 aa23.99■■□□□ 1.43
VPS9D1-AS1-202ENST00000562866 TC2NQ8N9U0 490 aa23.99■■□□□ 1.43
VPS9D1-AS1-202ENST00000562866 GIMAP8Q8ND71 665 aaPredicted RBP23.99■■□□□ 1.43
VPS9D1-AS1-202ENST00000562866 GMCL1P1Q8NEA9 526 aa23.99■■□□□ 1.43
VPS9D1-AS1-202ENST00000562866 TDRD3Q9H7E2 651 aaKnown RBP23.99■■□□□ 1.43
VPS9D1-AS1-202ENST00000562866 GDAQ9Y2T3 454 aa23.99■■□□□ 1.43
VPS9D1-AS1-202ENST00000562866 ITIH6Q6UXX5 1313 aa23.98■■□□□ 1.43
VPS9D1-AS1-202ENST00000562866 AKR1B15C9JRZ8 316 aaPredicted RBP23.98■■□□□ 1.43
VPS9D1-AS1-202ENST00000562866 PSMA7O14818 248 aa23.98■■□□□ 1.43
VPS9D1-AS1-202ENST00000562866 CTIFO43310 598 aaKnown RBP23.98■■□□□ 1.43
VPS9D1-AS1-202ENST00000562866 PBX1P40424 430 aa23.98■■□□□ 1.43
VPS9D1-AS1-202ENST00000562866 SEPT2Q15019 361 aa23.98■■□□□ 1.43
VPS9D1-AS1-202ENST00000562866 NOC3LQ8WTT2 800 aaKnown RBP23.98■■□□□ 1.43
VPS9D1-AS1-202ENST00000562866 PANX2Q96RD6 677 aa23.98■■□□□ 1.43
VPS9D1-AS1-202ENST00000562866 SYNPO2Q9UMS6 1093 aa23.98■■□□□ 1.43
VPS9D1-AS1-202ENST00000562866 FAM196BA6NMK8 535 aa23.98■■□□□ 1.43
VPS9D1-AS1-202ENST00000562866 C21orf2O43822 256 aa23.98■■□□□ 1.43
VPS9D1-AS1-202ENST00000562866 RBM26Q5T8P6 1007 aaKnown RBP23.98■■□□□ 1.43
VPS9D1-AS1-202ENST00000562866 TMEM139Q8IV31 216 aa23.98■■□□□ 1.43
VPS9D1-AS1-202ENST00000562866 TTLL6Q8N841 843 aa23.98■■□□□ 1.43
VPS9D1-AS1-202ENST00000562866 DHTKD1Q96HY7 919 aaPredicted RBP23.98■■□□□ 1.43
VPS9D1-AS1-202ENST00000562866 CDK5RAP3Q96JB5 506 aa23.98■■□□□ 1.43
VPS9D1-AS1-202ENST00000562866 GOLGA6L9A6NEM1 432 aa23.97■■□□□ 1.43
VPS9D1-AS1-202ENST00000562866 TDP2O95551 362 aa23.97■■□□□ 1.43
VPS9D1-AS1-202ENST00000562866 TPM1P09493 284 aa23.97■■□□□ 1.43
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms