RNA–Protein interactions for RNA: ENST00000562729.5

CHRFAM7A-204, Transcript of CHRNA7 (exons 5-10) and FAM7A (exons A-E) fusion, humanhuman

TSL 4

Gene CHRFAM7A, Length 573 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRFAM7A-204ENST00000562729 NT5C2P49902 561 aa10.92□□□□□ -0.66
CHRFAM7A-204ENST00000562729 TRDNQ13061 729 aa10.92□□□□□ -0.66
CHRFAM7A-204ENST00000562729 TBC1D10CQ8IV04 446 aa10.92□□□□□ -0.66
CHRFAM7A-204ENST00000562729 REPS2Q8NFH8 660 aa10.92□□□□□ -0.66
CHRFAM7A-204ENST00000562729 TTC14Q96N46 770 aa10.92□□□□□ -0.66
CHRFAM7A-204ENST00000562729 TMEM47Q9BQJ4 181 aa10.92□□□□□ -0.66
CHRFAM7A-204ENST00000562729 ZKSCAN3Q9BRR0 538 aa10.92□□□□□ -0.66
CHRFAM7A-204ENST00000562729 UBAC1Q9BSL1 405 aa10.92□□□□□ -0.66
CHRFAM7A-204ENST00000562729 DSCC1Q9BVC3 393 aa10.92□□□□□ -0.66
CHRFAM7A-204ENST00000562729 KRT23Q9C075 422 aa10.92□□□□□ -0.66
CHRFAM7A-204ENST00000562729 ACAD9Q9H845 621 aa10.92□□□□□ -0.66
CHRFAM7A-204ENST00000562729 KAT14Q9H8E8 782 aa10.92□□□□□ -0.66
CHRFAM7A-204ENST00000562729 CNNM2Q9H8M5 875 aa10.92□□□□□ -0.66
CHRFAM7A-204ENST00000562729 TCP11L1Q9NUJ3 509 aa10.92□□□□□ -0.66
CHRFAM7A-204ENST00000562729 ZHX1Q9UKY1 873 aaPredicted RBP10.92□□□□□ -0.66
CHRFAM7A-204ENST00000562729 CCPG1Q9ULG6 757 aa10.92□□□□□ -0.66
CHRFAM7A-204ENST00000562729 PRR12Q9ULL5 1215 aa10.92□□□□□ -0.66
CHRFAM7A-204ENST00000562729 DIS3Q9Y2L1 958 aaKnown RBP10.92□□□□□ -0.66
CHRFAM7A-204ENST00000562729 RIPK3Q9Y572 518 aa10.92□□□□□ -0.66
CHRFAM7A-204ENST00000562729 ZNFX1Q9P2E3 1918 aaKnown RBP10.92□□□□□ -0.66
CHRFAM7A-204ENST00000562729 PLXNA1Q9UIW2 1896 aa10.91□□□□□ -0.66
CHRFAM7A-204ENST00000562729 NEDD4P46934 1319 aa10.91□□□□□ -0.66
CHRFAM7A-204ENST00000562729 DNM1LO00429 736 aa10.91□□□□□ -0.66
CHRFAM7A-204ENST00000562729 DHX16O60231 1041 aaKnown RBP10.91□□□□□ -0.66
CHRFAM7A-204ENST00000562729 KDM4AO75164 1064 aa10.91□□□□□ -0.66
CHRFAM7A-204ENST00000562729 FGRP09769 529 aa10.91□□□□□ -0.66
CHRFAM7A-204ENST00000562729 SLC16A2P36021 539 aa10.91□□□□□ -0.66
CHRFAM7A-204ENST00000562729 SNAP25P60880 206 aa10.91□□□□□ -0.66
CHRFAM7A-204ENST00000562729 ZNF792Q3KQV3 632 aa10.91□□□□□ -0.66
CHRFAM7A-204ENST00000562729 TKFCQ3LXA3 575 aa10.91□□□□□ -0.66
CHRFAM7A-204ENST00000562729 HABP4Q5JVS0 413 aaKnown RBP10.91□□□□□ -0.66
CHRFAM7A-204ENST00000562729 GJC2Q5T442 439 aaPredicted RBP10.91□□□□□ -0.66
CHRFAM7A-204ENST00000562729 KIAA1211Q6ZU35 1233 aa10.91□□□□□ -0.66
CHRFAM7A-204ENST00000562729 TRPV1Q8NER1 839 aa10.91□□□□□ -0.66
CHRFAM7A-204ENST00000562729 PTCD2Q8WV60 388 aaKnown RBP10.91□□□□□ -0.66
CHRFAM7A-204ENST00000562729 AGBL1Q96MI9 1066 aa10.91□□□□□ -0.66
CHRFAM7A-204ENST00000562729 TRERF1Q96PN7 1200 aa10.91□□□□□ -0.66
CHRFAM7A-204ENST00000562729 XPNPEP3Q9NQH7 507 aa10.91□□□□□ -0.66
CHRFAM7A-204ENST00000562729 RNF146Q9NTX7 359 aa10.91□□□□□ -0.66
CHRFAM7A-204ENST00000562729 PRKAG2Q9UGJ0 569 aa10.91□□□□□ -0.66
CHRFAM7A-204ENST00000562729 NRBP1Q9UHY1 535 aa10.91□□□□□ -0.66
CHRFAM7A-204ENST00000562729 PFASO15067 1338 aa10.9□□□□□ -0.66
CHRFAM7A-204ENST00000562729 RAD50Q92878 1312 aa10.9□□□□□ -0.66
CHRFAM7A-204ENST00000562729 ERICH2A1L162 156 aa10.9□□□□□ -0.66
CHRFAM7A-204ENST00000562729 B4E1Z4 1266 aa10.9□□□□□ -0.66
CHRFAM7A-204ENST00000562729 PLA2G6O60733 806 aa10.9□□□□□ -0.66
CHRFAM7A-204ENST00000562729 AKR1A1P14550 325 aa10.9□□□□□ -0.66
CHRFAM7A-204ENST00000562729 GSPT1P15170 499 aaKnown RBP10.9□□□□□ -0.66
CHRFAM7A-204ENST00000562729 SYDE2Q5VT97 1194 aa10.9□□□□□ -0.66
CHRFAM7A-204ENST00000562729 NSMFQ6X4W1 530 aa10.9□□□□□ -0.66
CHRFAM7A-204ENST00000562729 NOL8Q76FK4 1167 aaKnown RBP10.9□□□□□ -0.66
CHRFAM7A-204ENST00000562729 RALYLQ86SE5 291 aaKnown RBP10.9□□□□□ -0.66
CHRFAM7A-204ENST00000562729 RNF180Q86T96 592 aa10.9□□□□□ -0.66
CHRFAM7A-204ENST00000562729 MSL3Q8N5Y2 521 aaKnown RBP10.9□□□□□ -0.66
CHRFAM7A-204ENST00000562729 SPC25Q9HBM1 224 aa10.9□□□□□ -0.66
CHRFAM7A-204ENST00000562729 TSHZ2Q9NRE2 1034 aa10.9□□□□□ -0.66
CHRFAM7A-204ENST00000562729 PNMA2Q9UL42 364 aa10.9□□□□□ -0.66
CHRFAM7A-204ENST00000562729 ZMYND8Q9ULU4 1186 aaPredicted RBP10.9□□□□□ -0.66
CHRFAM7A-204ENST00000562729 LAMA4Q16363 1823 aa10.9□□□□□ -0.66
CHRFAM7A-204ENST00000562729 FRMPD3Q5JV73 1810 aa10.9□□□□□ -0.66
CHRFAM7A-204ENST00000562729 SYNGAP1Q96PV0 1343 aa10.89□□□□□ -0.67
CHRFAM7A-204ENST00000562729 SYN1P17600 705 aa10.89□□□□□ -0.67
CHRFAM7A-204ENST00000562729 GPATCH4Q5T3I0 446 aaKnown RBP10.89□□□□□ -0.67
CHRFAM7A-204ENST00000562729 RASGRP2Q7LDG7 609 aa10.89□□□□□ -0.67
CHRFAM7A-204ENST00000562729 DGKHQ86XP1 1220 aa10.89□□□□□ -0.67
CHRFAM7A-204ENST00000562729 PNMA1Q8ND90 353 aa10.89□□□□□ -0.67
CHRFAM7A-204ENST00000562729 ZSCAN10Q96SZ4 725 aaPredicted RBP10.89□□□□□ -0.67
CHRFAM7A-204ENST00000562729 MPHOSPH6Q99547 160 aaKnown RBP10.89□□□□□ -0.67
CHRFAM7A-204ENST00000562729 FAM184BQ9ULE4 1060 aa10.89□□□□□ -0.67
CHRFAM7A-204ENST00000562729 TACC3Q9Y6A5 838 aa10.89□□□□□ -0.67
CHRFAM7A-204ENST00000562729 PTPDC1A2A3K4 754 aa10.88□□□□□ -0.67
CHRFAM7A-204ENST00000562729 HRO43593 1189 aa10.88□□□□□ -0.67
CHRFAM7A-204ENST00000562729 ICAM1P05362 532 aa10.88□□□□□ -0.67
CHRFAM7A-204ENST00000562729 GOLGA8HP0CJ92 632 aa10.88□□□□□ -0.67
CHRFAM7A-204ENST00000562729 PDHBP11177 359 aa10.88□□□□□ -0.67
CHRFAM7A-204ENST00000562729 CHMLP26374 656 aa10.88□□□□□ -0.67
CHRFAM7A-204ENST00000562729 SART3Q15020 963 aaKnown RBP10.88□□□□□ -0.67
CHRFAM7A-204ENST00000562729 IFIT1BQ5T764 474 aaKnown RBP10.88□□□□□ -0.67
CHRFAM7A-204ENST00000562729 DMRTA1Q5VZB9 504 aa10.88□□□□□ -0.67
CHRFAM7A-204ENST00000562729 TTBK2Q6IQ55 1244 aa10.88□□□□□ -0.67
CHRFAM7A-204ENST00000562729 CASC1Q6TDU7 716 aa10.88□□□□□ -0.67
CHRFAM7A-204ENST00000562729 CENPQQ7L2Z9 268 aaPredicted RBP10.88□□□□□ -0.67
CHRFAM7A-204ENST00000562729 FERMT2Q96AC1 680 aa10.88□□□□□ -0.67
CHRFAM7A-204ENST00000562729 LBHD1Q9BQE6 289 aaPredicted RBP10.88□□□□□ -0.67
CHRFAM7A-204ENST00000562729 ATP11BQ9Y2G3 1177 aa10.88□□□□□ -0.67
CHRFAM7A-204ENST00000562729 TNKSO95271 1327 aa10.87□□□□□ -0.67
CHRFAM7A-204ENST00000562729 DNAJC25-GNG10A0A024R161 153 aa10.87□□□□□ -0.67
CHRFAM7A-204ENST00000562729 ASB14A6NK59 587 aa10.87□□□□□ -0.67
CHRFAM7A-204ENST00000562729 TK2O00142 265 aa10.87□□□□□ -0.67
CHRFAM7A-204ENST00000562729 PGK1P00558 417 aa10.87□□□□□ -0.67
CHRFAM7A-204ENST00000562729 NEFLP07196 543 aa10.87□□□□□ -0.67
CHRFAM7A-204ENST00000562729 PARP1P09874 1014 aaKnown RBP10.87□□□□□ -0.67
CHRFAM7A-204ENST00000562729 COL6A1P12109 1028 aa10.87□□□□□ -0.67
CHRFAM7A-204ENST00000562729 TAL1P17542 331 aaPredicted RBP10.87□□□□□ -0.67
CHRFAM7A-204ENST00000562729 ADCYAP1R1P41586 468 aa10.87□□□□□ -0.67
CHRFAM7A-204ENST00000562729 NOVP48745 357 aa10.87□□□□□ -0.67
CHRFAM7A-204ENST00000562729 PSEN2P49810 448 aa10.87□□□□□ -0.67
CHRFAM7A-204ENST00000562729 CNTN2Q02246 1040 aa10.87□□□□□ -0.67
CHRFAM7A-204ENST00000562729 ZNF543Q08ER8 600 aa10.87□□□□□ -0.67
CHRFAM7A-204ENST00000562729 ACVR2BQ13705 512 aa10.87□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms