RNA–Protein interactions for RNA: ENST00000561568.5

USB1-204, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 4

Gene USB1, Length 671 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-204ENST00000561568 PFKFB2O60825 505 aa18.94■□□□□ 0.62
USB1-204ENST00000561568 XRCC5P13010 732 aaKnown RBP18.94■□□□□ 0.62
USB1-204ENST00000561568 RGS2P41220 211 aa18.94■□□□□ 0.62
USB1-204ENST00000561568 MAP2K5Q13163 448 aa18.94■□□□□ 0.62
USB1-204ENST00000561568 STK3Q13188 491 aa18.94■□□□□ 0.62
USB1-204ENST00000561568 FBXO46Q6PJ61 603 aaPredicted RBP18.94■□□□□ 0.62
USB1-204ENST00000561568 DPP9Q86TI2 863 aa18.94■□□□□ 0.62
USB1-204ENST00000561568 ANKRD35Q8N283 1001 aa18.94■□□□□ 0.62
USB1-204ENST00000561568 RGS22Q8NE09 1264 aa18.94■□□□□ 0.62
USB1-204ENST00000561568 RAET1EQ8TD07 263 aa18.94■□□□□ 0.62
USB1-204ENST00000561568 USP6NLQ92738 828 aa18.94■□□□□ 0.62
USB1-204ENST00000561568 ZSCAN31Q96LW9 406 aaPredicted RBP18.94■□□□□ 0.62
USB1-204ENST00000561568 RBM27Q9P2N5 1060 aaKnown RBP18.94■□□□□ 0.62
USB1-204ENST00000561568 GABRQQ9UN88 632 aa18.94■□□□□ 0.62
USB1-204ENST00000561568 V9GY48 417 aaPredicted RBP18.94■□□□□ 0.62
USB1-204ENST00000561568 IFNAR1P17181 557 aa18.93■□□□□ 0.62
USB1-204ENST00000561568 ADORA2AP29274 412 aa18.93■□□□□ 0.62
USB1-204ENST00000561568 AKAP17AQ02040 695 aaKnown RBP18.93■□□□□ 0.62
USB1-204ENST00000561568 PRKCZQ05513 592 aa18.93■□□□□ 0.62
USB1-204ENST00000561568 FUT2Q10981 343 aa18.93■□□□□ 0.62
USB1-204ENST00000561568 USH1GQ495M9 461 aa18.93■□□□□ 0.62
USB1-204ENST00000561568 MCF2L2Q86YR7 1114 aa18.93■□□□□ 0.62
USB1-204ENST00000561568 TRMT44Q8IYL2 757 aaKnown RBP18.93■□□□□ 0.62
USB1-204ENST00000561568 PIBF1Q8WXW3 757 aa18.93■□□□□ 0.62
USB1-204ENST00000561568 COL11A1P12107 1806 aaPredicted RBP18.93■□□□□ 0.62
USB1-204ENST00000561568 PRPF3O43395 683 aaKnown RBP18.92■□□□□ 0.62
USB1-204ENST00000561568 HOXC6P09630 235 aa18.92■□□□□ 0.62
USB1-204ENST00000561568 MCM2P49736 904 aa18.92■□□□□ 0.62
USB1-204ENST00000561568 NTRK3Q16288 839 aa18.92■□□□□ 0.62
USB1-204ENST00000561568 ME3Q16798 604 aa18.92■□□□□ 0.62
USB1-204ENST00000561568 MUM1L1Q5H9M0 696 aa18.92■□□□□ 0.62
USB1-204ENST00000561568 SAMD3Q8N6K7 520 aa18.92■□□□□ 0.62
USB1-204ENST00000561568 PXYLP1Q8TE99 480 aa18.92■□□□□ 0.62
USB1-204ENST00000561568 NCOA5Q9HCD5 579 aaKnown RBP18.92■□□□□ 0.62
USB1-204ENST00000561568 DIS3Q9Y2L1 958 aaKnown RBP18.92■□□□□ 0.62
USB1-204ENST00000561568 CDKL5O76039 1030 aa18.91■□□□□ 0.62
USB1-204ENST00000561568 CYP2B6P20813 491 aa18.91■□□□□ 0.62
USB1-204ENST00000561568 SCRN1Q12765 414 aa18.91■□□□□ 0.62
USB1-204ENST00000561568 NOL8Q76FK4 1167 aaKnown RBP18.91■□□□□ 0.62
USB1-204ENST00000561568 CLEC4DQ8WXI8 215 aa18.91■□□□□ 0.62
USB1-204ENST00000561568 RNF26Q9BY78 433 aaPredicted RBP18.91■□□□□ 0.62
USB1-204ENST00000561568 MAP3K20Q9NYL2 800 aaKnown RBP18.91■□□□□ 0.62
USB1-204ENST00000561568 PFASO15067 1338 aa18.91■□□□□ 0.62
USB1-204ENST00000561568 ADCY3O60266 1144 aa18.9■□□□□ 0.62
USB1-204ENST00000561568 PPP1R11O60927 126 aaPredicted RBP18.9■□□□□ 0.62
USB1-204ENST00000561568 SSRP1Q08945 709 aaKnown RBP18.9■□□□□ 0.62
USB1-204ENST00000561568 COL13A1Q5TAT6 717 aaPredicted RBP18.9■□□□□ 0.62
USB1-204ENST00000561568 TRIM22Q8IYM9 498 aa18.9■□□□□ 0.62
USB1-204ENST00000561568 A1CFQ9NQ94 594 aaKnown RBP18.9■□□□□ 0.62
USB1-204ENST00000561568 SH2B1Q9NRF2 756 aaPredicted RBP18.9■□□□□ 0.62
USB1-204ENST00000561568 PTCH2Q9Y6C5 1203 aa18.9■□□□□ 0.62
USB1-204ENST00000561568 MGAMO43451 1857 aa18.9■□□□□ 0.62
USB1-204ENST00000561568 DNAJC25-GNG10A0A024R161 153 aa18.89■□□□□ 0.61
USB1-204ENST00000561568 hCG_1984214I3L0E3 225 aa18.89■□□□□ 0.61
USB1-204ENST00000561568 COBLO75128 1261 aa18.89■□□□□ 0.61
USB1-204ENST00000561568 NSMFQ6X4W1 530 aa18.89■□□□□ 0.61
USB1-204ENST00000561568 RNF207Q6ZRF8 634 aa18.89■□□□□ 0.61
USB1-204ENST00000561568 ZNF713Q8N859 430 aaPredicted RBP18.89■□□□□ 0.61
USB1-204ENST00000561568 SLAIN1Q8ND83 568 aa18.89■□□□□ 0.61
USB1-204ENST00000561568 APBA2Q99767 749 aa18.89■□□□□ 0.61
USB1-204ENST00000561568 MCOLN1Q9GZU1 580 aa18.89■□□□□ 0.61
USB1-204ENST00000561568 CYP39A1Q9NYL5 469 aa18.89■□□□□ 0.61
USB1-204ENST00000561568 CNTNAP5Q8WYK1 1306 aa18.89■□□□□ 0.61
USB1-204ENST00000561568 hCG_1642624A0A1W2PR95 340 aa18.88■□□□□ 0.61
USB1-204ENST00000561568 PTPDC1A2A3K4 754 aa18.88■□□□□ 0.61
USB1-204ENST00000561568 POTEB2H3BUK9 544 aa18.88■□□□□ 0.61
USB1-204ENST00000561568 NFIBO00712 420 aa18.88■□□□□ 0.61
USB1-204ENST00000561568 PGK2P07205 417 aa18.88■□□□□ 0.61
USB1-204ENST00000561568 GRK4P32298 578 aa18.88■□□□□ 0.61
USB1-204ENST00000561568 BAATQ14032 418 aaPredicted RBP18.88■□□□□ 0.61
USB1-204ENST00000561568 PFKFB3Q16875 520 aaPredicted RBP18.88■□□□□ 0.61
USB1-204ENST00000561568 ZNF792Q3KQV3 632 aa18.88■□□□□ 0.61
USB1-204ENST00000561568 PHKBQ93100 1093 aa18.88■□□□□ 0.61
USB1-204ENST00000561568 GTF3C6Q969F1 213 aa18.88■□□□□ 0.61
USB1-204ENST00000561568 SLC26A6Q9BXS9 759 aa18.88■□□□□ 0.61
USB1-204ENST00000561568 BAZ2BQ9UIF8 2168 aaKnown RBP18.88■□□□□ 0.61
USB1-204ENST00000561568 SCG2P13521 617 aa18.87■□□□□ 0.61
USB1-204ENST00000561568 HEATR3Q7Z4Q2 680 aa18.87■□□□□ 0.61
USB1-204ENST00000561568 ZNF467Q7Z7K2 595 aaPredicted RBP18.87■□□□□ 0.61
USB1-204ENST00000561568 TEX2Q8IWB9 1127 aa18.87■□□□□ 0.61
USB1-204ENST00000561568 DOCK3Q8IZD9 2030 aa18.87■□□□□ 0.61
USB1-204ENST00000561568 MSL3Q8N5Y2 521 aaKnown RBP18.87■□□□□ 0.61
USB1-204ENST00000561568 NECAB1Q8N987 351 aa18.87■□□□□ 0.61
USB1-204ENST00000561568 NPLOC4Q8TAT6 608 aa18.87■□□□□ 0.61
USB1-204ENST00000561568 DEXIO95424 95 aa18.86■□□□□ 0.61
USB1-204ENST00000561568 CFBP00751 764 aa18.86■□□□□ 0.61
USB1-204ENST00000561568 TAL1P17542 331 aaPredicted RBP18.86■□□□□ 0.61
USB1-204ENST00000561568 RPS6P62753 249 aaKnown RBP18.86■□□□□ 0.61
USB1-204ENST00000561568 SLC9C1Q4G0N8 1177 aa18.86■□□□□ 0.61
USB1-204ENST00000561568 OLFML2BQ68BL8 750 aa18.86■□□□□ 0.61
USB1-204ENST00000561568 FAM133AQ8N9E0 248 aa18.86■□□□□ 0.61
USB1-204ENST00000561568 MAML3Q96JK9 1138 aa18.86■□□□□ 0.61
USB1-204ENST00000561568 BARHL2Q9NY43 387 aa18.86■□□□□ 0.61
USB1-204ENST00000561568 BIN2Q9UBW5 565 aaPredicted RBP18.86■□□□□ 0.61
USB1-204ENST00000561568 ADD3Q9UEY8 706 aaKnown RBP18.86■□□□□ 0.61
USB1-204ENST00000561568 B4DLN1 442 aa18.85■□□□□ 0.61
USB1-204ENST00000561568 GCOM1H8Y6P7 765 aaPredicted RBP18.85■□□□□ 0.61
USB1-204ENST00000561568 LARGE1O95461 756 aa18.85■□□□□ 0.61
USB1-204ENST00000561568 POLR2MP0CAP2 368 aa18.85■□□□□ 0.61
USB1-204ENST00000561568 CALML3P27482 149 aa18.85■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 43.1 ms