RNA–Protein interactions for RNA: ENST00000561235.5

TCF12-223, Transcript of transcription factor 12, human

TSL 4

Gene TCF12, Length 818 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
TCF12-223	ENST00000561235	TEK	Q02763	1124 aa		7.81	□□□□□ -1.16
TCF12-223	ENST00000561235	PRKCQ	Q04759	706 aa		7.81	□□□□□ -1.16
TCF12-223	ENST00000561235	NPLOC4	Q8TAT6	608 aa		7.81	□□□□□ -1.16
TCF12-223	ENST00000561235	NDOR1	Q9UHB4	597 aa		7.81	□□□□□ -1.16
TCF12-223	ENST00000561235	TMEFF2	Q9UIK5	374 aa	Predicted RBP	7.81	□□□□□ -1.16
TCF12-223	ENST00000561235	RNF112	Q9ULX5	631 aa		7.81	□□□□□ -1.16
TCF12-223	ENST00000561235	KRTAP9-1	A8MXZ3	250 aa	Predicted RBP	7.8	□□□□□ -1.16
TCF12-223	ENST00000561235	IRS4	O14654	1257 aa	Predicted RBP	7.8	□□□□□ -1.16
TCF12-223	ENST00000561235	MED26	O95402	600 aa		7.8	□□□□□ -1.16
TCF12-223	ENST00000561235	PLS3	P13797	630 aa		7.8	□□□□□ -1.16
TCF12-223	ENST00000561235	RPL10	P27635	214 aa	Known RBP	7.8	□□□□□ -1.16
TCF12-223	ENST00000561235	IKZF1	Q13422	519 aa		7.8	□□□□□ -1.16
TCF12-223	ENST00000561235	RCSD1	Q6JBY9	416 aa		7.8	□□□□□ -1.16
TCF12-223	ENST00000561235	KCNT2	Q6UVM3	1135 aa		7.8	□□□□□ -1.16
TCF12-223	ENST00000561235	FILIP1	Q7Z7B0	1213 aa		7.8	□□□□□ -1.16
TCF12-223	ENST00000561235	PPIL6	Q8IXY8	311 aa		7.8	□□□□□ -1.16
TCF12-223	ENST00000561235	SLC7A14	Q8TBB6	771 aa		7.8	□□□□□ -1.16
TCF12-223	ENST00000561235	ASB11	Q8WXH4	323 aa		7.8	□□□□□ -1.16
TCF12-223	ENST00000561235	NINJ1	Q92982	152 aa		7.8	□□□□□ -1.16
TCF12-223	ENST00000561235	MRPL4	Q9BYD3	311 aa	Known RBP	7.8	□□□□□ -1.16
TCF12-223	ENST00000561235	KRTAP9-2	Q9BYQ4	174 aa		7.8	□□□□□ -1.16
TCF12-223	ENST00000561235	SLC52A2	Q9HAB3	445 aa		7.8	□□□□□ -1.16
TCF12-223	ENST00000561235	SFMBT1	Q9UHJ3	866 aa		7.8	□□□□□ -1.16
TCF12-223	ENST00000561235	VAV3	Q9UKW4	847 aa		7.8	□□□□□ -1.16
TCF12-223	ENST00000561235	TRAF6	Q9Y4K3	522 aa		7.8	□□□□□ -1.16
TCF12-223	ENST00000561235	ASXL2	Q76L83	1435 aa		7.79	□□□□□ -1.16
TCF12-223	ENST00000561235	FNDC3B	Q53EP0	1204 aa	Known RBP	7.79	□□□□□ -1.16
TCF12-223	ENST00000561235	RNF187	Q5TA31	235 aa	Predicted RBP	7.79	□□□□□ -1.16
TCF12-223	ENST00000561235	WAPL	Q7Z5K2	1190 aa		7.79	□□□□□ -1.16
TCF12-223	ENST00000561235	KSR1	Q8IVT5	923 aa		7.79	□□□□□ -1.16
TCF12-223	ENST00000561235	CCDC103	Q8IW40	242 aa		7.79	□□□□□ -1.16
TCF12-223	ENST00000561235	NIM1K	Q8IY84	436 aa		7.79	□□□□□ -1.16
TCF12-223	ENST00000561235	CARS2	Q9HA77	564 aa	Known RBP	7.79	□□□□□ -1.16
TCF12-223	ENST00000561235	BSDC1	Q9NW68	430 aa	Predicted RBP	7.79	□□□□□ -1.16
TCF12-223	ENST00000561235	IFT57	Q9NWB7	429 aa		7.79	□□□□□ -1.16
TCF12-223	ENST00000561235	FGF10	O15520	208 aa	Predicted RBP	7.78	□□□□□ -1.16
TCF12-223	ENST00000561235	COBL	O75128	1261 aa		7.78	□□□□□ -1.16
TCF12-223	ENST00000561235	RFPL3	O75679	317 aa		7.78	□□□□□ -1.16
TCF12-223	ENST00000561235	SDS	P20132	328 aa		7.78	□□□□□ -1.16
TCF12-223	ENST00000561235	SSTR4	P31391	388 aa		7.78	□□□□□ -1.16
TCF12-223	ENST00000561235	GRIK1	P39086	918 aa		7.78	□□□□□ -1.16
TCF12-223	ENST00000561235	MASP1	P48740	699 aa		7.78	□□□□□ -1.16
TCF12-223	ENST00000561235	GABRE	P78334	506 aa		7.78	□□□□□ -1.16
TCF12-223	ENST00000561235	EEF1DP3	Q658K8	133 aa		7.78	□□□□□ -1.16
TCF12-223	ENST00000561235	ZNF574	Q6ZN55	896 aa	Predicted RBP	7.78	□□□□□ -1.16
TCF12-223	ENST00000561235	SPRED2	Q7Z698	418 aa		7.78	□□□□□ -1.16
TCF12-223	ENST00000561235	BCL7C	Q8WUZ0	217 aa	Predicted RBP	7.78	□□□□□ -1.16
TCF12-223	ENST00000561235	MISP3	Q96FF7	219 aa		7.78	□□□□□ -1.16
TCF12-223	ENST00000561235	GPATCH3	Q96I76	525 aa		7.78	□□□□□ -1.16
TCF12-223	ENST00000561235	PTCHD1	Q96NR3	888 aa		7.78	□□□□□ -1.16
TCF12-223	ENST00000561235	PLAA	Q9Y263	795 aa		7.78	□□□□□ -1.16
TCF12-223	ENST00000561235	MEFV	O15553	781 aa	Predicted RBP	7.77	□□□□□ -1.17
TCF12-223	ENST00000561235	DNAJC6	O75061	913 aa		7.77	□□□□□ -1.17
TCF12-223	ENST00000561235	CD8B	P10966	210 aa		7.77	□□□□□ -1.17
TCF12-223	ENST00000561235	LCP1	P13796	627 aa		7.77	□□□□□ -1.17
TCF12-223	ENST00000561235	NCL	P19338	710 aa	Known RBP	7.77	□□□□□ -1.17
TCF12-223	ENST00000561235	TRIM61	Q5EBN2	209 aa		7.77	□□□□□ -1.17
TCF12-223	ENST00000561235	TAF7L	Q5H9L4	462 aa		7.77	□□□□□ -1.17
TCF12-223	ENST00000561235	INTS5	Q6P9B9	1019 aa	Known RBP	7.77	□□□□□ -1.17
TCF12-223	ENST00000561235	BRAP	Q7Z569	592 aa		7.77	□□□□□ -1.17
TCF12-223	ENST00000561235	FGD2	Q7Z6J4	655 aa		7.77	□□□□□ -1.17
TCF12-223	ENST00000561235	CPNE8	Q86YQ8	564 aa		7.77	□□□□□ -1.17
TCF12-223	ENST00000561235	WFDC3	Q8IUB2	231 aa		7.77	□□□□□ -1.17
TCF12-223	ENST00000561235	NAT16	Q8N8M0	369 aa		7.77	□□□□□ -1.17
TCF12-223	ENST00000561235	PTPRN2	Q92932	1015 aa		7.77	□□□□□ -1.17
TCF12-223	ENST00000561235	PHF20	Q9BVI0	1012 aa		7.77	□□□□□ -1.17
TCF12-223	ENST00000561235	TRIM39	Q9HCM9	518 aa		7.77	□□□□□ -1.17
TCF12-223	ENST00000561235	ERVK13-1	Q9NX77	482 aa		7.77	□□□□□ -1.17
TCF12-223	ENST00000561235	NPHP3-ACAD11	A0A0J9YXS1	232 aa		7.76	□□□□□ -1.17
TCF12-223	ENST00000561235	KRTAP9-6	A0A140TA67	174 aa		7.76	□□□□□ -1.17
TCF12-223	ENST00000561235	LOC101059915	A0A1B0GWI6	518 aa	Predicted RBP	7.76	□□□□□ -1.17
TCF12-223	ENST00000561235	PAM	P19021	973 aa		7.76	□□□□□ -1.17
TCF12-223	ENST00000561235	TM4SF20	Q53R12	229 aa		7.76	□□□□□ -1.17
TCF12-223	ENST00000561235	MBLAC2	Q68D91	279 aa		7.76	□□□□□ -1.17
TCF12-223	ENST00000561235	STYK1	Q6J9G0	422 aa		7.76	□□□□□ -1.17
TCF12-223	ENST00000561235	TMEM52	Q8NDY8	209 aa		7.76	□□□□□ -1.17
TCF12-223	ENST00000561235	GSTCD	Q8NEC7	633 aa		7.76	□□□□□ -1.17
TCF12-223	ENST00000561235	DCAF4	Q8WV16	495 aa		7.76	□□□□□ -1.17
TCF12-223	ENST00000561235	MFSD3	Q96ES6	412 aa		7.76	□□□□□ -1.17
TCF12-223	ENST00000561235	SCLY	Q96I15	445 aa		7.76	□□□□□ -1.17
TCF12-223	ENST00000561235	SPC25	Q9HBM1	224 aa		7.76	□□□□□ -1.17
TCF12-223	ENST00000561235	SLC5A6	Q9Y289	635 aa		7.76	□□□□□ -1.17
TCF12-223	ENST00000561235	ZNF281	Q9Y2X9	895 aa		7.76	□□□□□ -1.17
TCF12-223	ENST00000561235	PRKAB1	Q9Y478	270 aa		7.76	□□□□□ -1.17
TCF12-223	ENST00000561235	KCNQ2	O43526	872 aa		7.75	□□□□□ -1.17
TCF12-223	ENST00000561235	MSC	O60682	206 aa		7.75	□□□□□ -1.17
TCF12-223	ENST00000561235	DNAJC8	O75937	253 aa	Predicted RBP	7.75	□□□□□ -1.17
TCF12-223	ENST00000561235	MYCLP1	P12525	358 aa	Predicted RBP	7.75	□□□□□ -1.17
TCF12-223	ENST00000561235	LTBR	P36941	435 aa		7.75	□□□□□ -1.17
TCF12-223	ENST00000561235	ZP2	Q05996	745 aa		7.75	□□□□□ -1.17
TCF12-223	ENST00000561235	LAPTM5	Q13571	262 aa		7.75	□□□□□ -1.17
TCF12-223	ENST00000561235	INF2	Q27J81	1249 aa		7.75	□□□□□ -1.17
TCF12-223	ENST00000561235	ACBD5	Q5T8D3	534 aa	Predicted RBP	7.75	□□□□□ -1.17
TCF12-223	ENST00000561235	DIO2	Q92813	273 aa		7.75	□□□□□ -1.17
TCF12-223	ENST00000561235	PUS7	Q96PZ0	661 aa	Known RBP	7.75	□□□□□ -1.17
TCF12-223	ENST00000561235	SLAMF8	Q9P0V8	285 aa		7.75	□□□□□ -1.17
TCF12-223	ENST00000561235	EBF1	Q9UH73	591 aa		7.75	□□□□□ -1.17
TCF12-223	ENST00000561235	PCDHA9	Q9Y5H5	950 aa		7.75	□□□□□ -1.17
TCF12-223	ENST00000561235	RASGRP1	O95267	797 aa		7.74	□□□□□ -1.17
TCF12-223	ENST00000561235	CEBPA	P49715	358 aa	Predicted RBP	7.74	□□□□□ -1.17

Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms