RNA–Protein interactions for RNA: ENST00000560970.5

TPM1-227, Transcript of tropomyosin 1, humanhuman

TSL 1 (best)

Gene TPM1, Length 1,039 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-227ENST00000560970 HOMER2Q9NSB8 354 aa12.69□□□□□ -0.38
TPM1-227ENST00000560970 RNF216Q9NWF9 866 aaPredicted RBP12.69□□□□□ -0.38
TPM1-227ENST00000560970 MUC3AQ02505 3323 aa12.68□□□□□ -0.38
TPM1-227ENST00000560970 ASGR1P07306 291 aa12.68□□□□□ -0.38
TPM1-227ENST00000560970 HSPD1P10809 573 aaKnown RBP12.68□□□□□ -0.38
TPM1-227ENST00000560970 PPARAQ07869 468 aa12.68□□□□□ -0.38
TPM1-227ENST00000560970 PPIGQ13427 754 aaKnown RBP eCLIP12.68□□□□□ -0.381e-7■■□□□ 14.5
TPM1-227ENST00000560970 PPP4R3BQ5MIZ7 849 aa12.68□□□□□ -0.38
TPM1-227ENST00000560970 SLFN13Q68D06 897 aa12.68□□□□□ -0.38
TPM1-227ENST00000560970 CWC27Q6UX04 472 aaKnown RBP12.68□□□□□ -0.38
TPM1-227ENST00000560970 FAM160B2Q86V87 743 aa12.68□□□□□ -0.38
TPM1-227ENST00000560970 FAM126BQ8IXS8 530 aa12.68□□□□□ -0.38
TPM1-227ENST00000560970 CCDC144CPQ8IYA2 1237 aa12.68□□□□□ -0.38
TPM1-227ENST00000560970 FAM133AQ8N9E0 248 aa12.68□□□□□ -0.38
TPM1-227ENST00000560970 NEDD1Q8NHV4 660 aa12.68□□□□□ -0.38
TPM1-227ENST00000560970 GMCL1Q96IK5 515 aa12.68□□□□□ -0.38
TPM1-227ENST00000560970 KATNBL1Q9H079 304 aa12.68□□□□□ -0.38
TPM1-227ENST00000560970 A1CFQ9NQ94 594 aaKnown RBP12.68□□□□□ -0.38
TPM1-227ENST00000560970 DIAPH3Q9NSV4 1193 aa12.68□□□□□ -0.38
TPM1-227ENST00000560970 RNF146Q9NTX7 359 aa12.68□□□□□ -0.38
TPM1-227ENST00000560970 CHD7Q9P2D1 2997 aa12.68□□□□□ -0.38
TPM1-227ENST00000560970 TRANK1O15050 2925 aa12.67□□□□□ -0.38
TPM1-227ENST00000560970 TLR3O15455 904 aaKnown RBP12.67□□□□□ -0.38
TPM1-227ENST00000560970 NKX3-2P78367 333 aa12.67□□□□□ -0.38
TPM1-227ENST00000560970 IRX5P78411 483 aaPredicted RBP12.67□□□□□ -0.38
TPM1-227ENST00000560970 IKQ13123 557 aaPredicted RBP12.67□□□□□ -0.38
TPM1-227ENST00000560970 MFSD5Q6N075 450 aa12.67□□□□□ -0.38
TPM1-227ENST00000560970 PSRC1Q6PGN9 363 aaPredicted RBP12.67□□□□□ -0.38
TPM1-227ENST00000560970 TLK2Q86UE8 772 aa12.67□□□□□ -0.38
TPM1-227ENST00000560970 TIFAQ96CG3 184 aa12.67□□□□□ -0.38
TPM1-227ENST00000560970 BUD13Q9BRD0 619 aaKnown RBP eCLIP12.67□□□□□ -0.388e-7■■■□□ 15.2
TPM1-227ENST00000560970 REV3LO60673 3130 aa12.67□□□□□ -0.38
TPM1-227ENST00000560970 ZNF536O15090 1300 aa12.66□□□□□ -0.38
TPM1-227ENST00000560970 ZMYM6O95789 1325 aa12.66□□□□□ -0.38
TPM1-227ENST00000560970 HSFX4A0A1B0GTS1 333 aaPredicted RBP12.66□□□□□ -0.38
TPM1-227ENST00000560970 HSFX3A0A1B0GWH4 333 aaPredicted RBP12.66□□□□□ -0.38
TPM1-227ENST00000560970 TMEM232C9JQI7 657 aa12.66□□□□□ -0.38
TPM1-227ENST00000560970 ARVCFO00192 962 aa12.66□□□□□ -0.38
TPM1-227ENST00000560970 HIP1O00291 1037 aa12.66□□□□□ -0.38
TPM1-227ENST00000560970 CTAGE5O15320 804 aa12.66□□□□□ -0.38
TPM1-227ENST00000560970 CHMLP26374 656 aa12.66□□□□□ -0.38
TPM1-227ENST00000560970 SLC1A4P43007 532 aa12.66□□□□□ -0.38
TPM1-227ENST00000560970 CDK7P50613 346 aa12.66□□□□□ -0.38
TPM1-227ENST00000560970 TFAP4Q01664 338 aa12.66□□□□□ -0.38
TPM1-227ENST00000560970 CTDSPL2Q05D32 466 aa12.66□□□□□ -0.38
TPM1-227ENST00000560970 ALX1Q15699 326 aa12.66□□□□□ -0.38
TPM1-227ENST00000560970 TKFCQ3LXA3 575 aa12.66□□□□□ -0.38
TPM1-227ENST00000560970 GNASQ5JWF2 1037 aa12.66□□□□□ -0.38
TPM1-227ENST00000560970 TMEM199Q8N511 208 aa12.66□□□□□ -0.38
TPM1-227ENST00000560970 DDX52Q9Y2R4 599 aaKnown RBP eCLIP12.66□□□□□ -0.38
TPM1-227ENST00000560970 ASTN1O14525 1302 aa12.65□□□□□ -0.38
TPM1-227ENST00000560970 ASB14A6NK59 587 aa12.65□□□□□ -0.38
TPM1-227ENST00000560970 TSPY2A6NKD2 308 aa12.65□□□□□ -0.38
TPM1-227ENST00000560970 PLA2G6O60733 806 aa12.65□□□□□ -0.38
TPM1-227ENST00000560970 FGAP02671 866 aa12.65□□□□□ -0.38
TPM1-227ENST00000560970 CNTN2Q02246 1040 aa12.65□□□□□ -0.38
TPM1-227ENST00000560970 RASGRP2Q7LDG7 609 aa12.65□□□□□ -0.38
TPM1-227ENST00000560970 CHURC1Q8WUH1 139 aa12.65□□□□□ -0.38
TPM1-227ENST00000560970 STAG1Q8WVM7 1258 aa12.65□□□□□ -0.38
TPM1-227ENST00000560970 PPP1R12CQ9BZL4 782 aa12.65□□□□□ -0.38
TPM1-227ENST00000560970 INCENPQ9NQS7 918 aa12.65□□□□□ -0.38
TPM1-227ENST00000560970 STX8Q9UNK0 236 aa12.65□□□□□ -0.38
TPM1-227ENST00000560970 C11orf97A0A1B0GVM6 126 aaPredicted RBP12.64□□□□□ -0.39
TPM1-227ENST00000560970 SOWAHBA6NEL2 793 aa12.64□□□□□ -0.39
TPM1-227ENST00000560970 CABYRO75952 493 aa12.64□□□□□ -0.39
TPM1-227ENST00000560970 CD4P01730 458 aa12.64□□□□□ -0.39
TPM1-227ENST00000560970 ALAS1P13196 640 aa12.64□□□□□ -0.39
TPM1-227ENST00000560970 CSF2RAP15509 400 aa12.64□□□□□ -0.39
TPM1-227ENST00000560970 HAND2P61296 217 aa12.64□□□□□ -0.39
TPM1-227ENST00000560970 BEX3Q00994 111 aa12.64□□□□□ -0.39
TPM1-227ENST00000560970 TNFAIP2Q03169 654 aa12.64□□□□□ -0.39
TPM1-227ENST00000560970 GRIN2CQ14957 1233 aa12.64□□□□□ -0.39
TPM1-227ENST00000560970 FSCN1Q16658 493 aaKnown RBP12.64□□□□□ -0.39
TPM1-227ENST00000560970 TMEM240Q5SV17 173 aa12.64□□□□□ -0.39
TPM1-227ENST00000560970 RASIP1Q5U651 963 aa12.64□□□□□ -0.39
TPM1-227ENST00000560970 TBC1D10CQ8IV04 446 aa12.64□□□□□ -0.39
TPM1-227ENST00000560970 FBXO16Q8IX29 292 aaPredicted RBP12.64□□□□□ -0.39
TPM1-227ENST00000560970 VTI1AQ96AJ9 217 aa12.64□□□□□ -0.39
TPM1-227ENST00000560970 AGBL1Q96MI9 1066 aa12.64□□□□□ -0.39
TPM1-227ENST00000560970 MTIF3Q9H2K0 278 aaKnown RBP12.64□□□□□ -0.39
TPM1-227ENST00000560970 ZNF576Q9H609 170 aa12.64□□□□□ -0.39
TPM1-227ENST00000560970 PPP4R2Q9NY27 417 aa12.64□□□□□ -0.39
TPM1-227ENST00000560970 ANAPC4Q9UJX5 808 aa12.64□□□□□ -0.39
TPM1-227ENST00000560970 GNEQ9Y223 722 aaKnown RBP12.64□□□□□ -0.39
TPM1-227ENST00000560970 MYO9BQ13459 2157 aa12.64□□□□□ -0.39
TPM1-227ENST00000560970 RAD50Q92878 1312 aa12.63□□□□□ -0.39
TPM1-227ENST00000560970 TTC28Q96AY4 2481 aa12.63□□□□□ -0.39
TPM1-227ENST00000560970 SIP14410 1827 aa12.63□□□□□ -0.39
TPM1-227ENST00000560970 MFAP1P55081 439 aaKnown RBP12.63□□□□□ -0.39
TPM1-227ENST00000560970 CCDC96Q2M329 555 aa12.63□□□□□ -0.39
TPM1-227ENST00000560970 CXCL17Q6UXB2 119 aa12.63□□□□□ -0.39
TPM1-227ENST00000560970 KCTD1Q719H9 257 aa12.63□□□□□ -0.39
TPM1-227ENST00000560970 NOL8Q76FK4 1167 aaKnown RBP12.63□□□□□ -0.39
TPM1-227ENST00000560970 USP38Q8NB14 1042 aa12.63□□□□□ -0.39
TPM1-227ENST00000560970 SYMPKQ92797 1274 aaKnown RBP12.63□□□□□ -0.39
TPM1-227ENST00000560970 TRERF1Q96PN7 1200 aa12.63□□□□□ -0.39
TPM1-227ENST00000560970 PBX4Q9BYU1 374 aa12.63□□□□□ -0.39
TPM1-227ENST00000560970 HIPK3Q9H422 1215 aa12.63□□□□□ -0.39
TPM1-227ENST00000560970 CYP39A1Q9NYL5 469 aa12.63□□□□□ -0.39
TPM1-227ENST00000560970 CCPG1Q9ULG6 757 aa12.63□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 74.7 ms