RNA–Protein interactions for RNA: ENST00000560944.1

CERS3-208, Transcript of ceramide synthase 3, human

TSL 3

Gene CERS3, Length 448 nt, Biotype processed transcript.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CERS3-208	ENST00000560944	UBE2S	Q16763	222 aa		13.03	□□□□□ -0.32
CERS3-208	ENST00000560944	FAM110C	Q1W6H9	321 aa		13.03	□□□□□ -0.32
CERS3-208	ENST00000560944	NOM1	Q5C9Z4	860 aa	Known RBP	13.03	□□□□□ -0.32
CERS3-208	ENST00000560944	ZNF296	Q8WUU4	475 aa	Predicted RBP	13.03	□□□□□ -0.32
CERS3-208	ENST00000560944	TRIM47	Q96LD4	638 aa		13.03	□□□□□ -0.32
CERS3-208	ENST00000560944	KCNJ14	Q9UNX9	436 aa		13.03	□□□□□ -0.32
CERS3-208	ENST00000560944	ALDH1A1	P00352	501 aa		13.02	□□□□□ -0.33
CERS3-208	ENST00000560944	HOXA13	P31271	388 aa	Predicted RBP	13.02	□□□□□ -0.33
CERS3-208	ENST00000560944	MCM2	P49736	904 aa		13.02	□□□□□ -0.33
CERS3-208	ENST00000560944	MAP2K1	Q02750	393 aa	Predicted RBP	13.02	□□□□□ -0.33
CERS3-208	ENST00000560944	PFKFB3	Q16875	520 aa	Predicted RBP	13.02	□□□□□ -0.33
CERS3-208	ENST00000560944	RIOX2	Q8IUF8	465 aa		13.02	□□□□□ -0.33
CERS3-208	ENST00000560944	MB21D1	Q8N884	522 aa		13.02	□□□□□ -0.33
CERS3-208	ENST00000560944	RASGRP4	Q8TDF6	673 aa		13.02	□□□□□ -0.33
CERS3-208	ENST00000560944	TRERF1	Q96PN7	1200 aa		13.02	□□□□□ -0.33
CERS3-208	ENST00000560944	RNF26	Q9BY78	433 aa	Predicted RBP	13.02	□□□□□ -0.33
CERS3-208	ENST00000560944	COL20A1	Q9P218	1284 aa		13.02	□□□□□ -0.33
CERS3-208	ENST00000560944	SEC63	Q9UGP8	760 aa	Known RBP	13.02	□□□□□ -0.33
CERS3-208	ENST00000560944	PCDHA1	Q9Y5I3	950 aa		13.02	□□□□□ -0.33
CERS3-208	ENST00000560944	CENPF	P49454	3210 aa		13.01	□□□□□ -0.33
CERS3-208	ENST00000560944	PGK2	P07205	417 aa		13.01	□□□□□ -0.33
CERS3-208	ENST00000560944	GJB2	P29033	226 aa		13.01	□□□□□ -0.33
CERS3-208	ENST00000560944	LACTB	P83111	547 aa	Predicted RBP	13.01	□□□□□ -0.33
CERS3-208	ENST00000560944	NSMF	Q6X4W1	530 aa		13.01	□□□□□ -0.33
CERS3-208	ENST00000560944	GPR142	Q7Z601	462 aa		13.01	□□□□□ -0.33
CERS3-208	ENST00000560944	REM2	Q8IYK8	340 aa	Predicted RBP	13.01	□□□□□ -0.33
CERS3-208	ENST00000560944	PGBD1	Q96JS3	809 aa		13.01	□□□□□ -0.33
CERS3-208	ENST00000560944	ALG1	Q9BT22	464 aa		13.01	□□□□□ -0.33
CERS3-208	ENST00000560944	AMN	Q9BXJ7	453 aa		13.01	□□□□□ -0.33
CERS3-208	ENST00000560944	CFHR5	Q9BXR6	569 aa		13.01	□□□□□ -0.33
CERS3-208	ENST00000560944	TMEM260	Q9NX78	707 aa		13.01	□□□□□ -0.33
CERS3-208	ENST00000560944	SAGE1	Q9NXZ1	904 aa		13.01	□□□□□ -0.33
CERS3-208	ENST00000560944	GABRQ	Q9UN88	632 aa		13.01	□□□□□ -0.33
CERS3-208	ENST00000560944	ASTN1	O14525	1302 aa		13.01	□□□□□ -0.33
CERS3-208	ENST00000560944	STK36	Q9NRP7	1315 aa		13.01	□□□□□ -0.33
CERS3-208	ENST00000560944	FAM205C	A6NFA0	338 aa		13	□□□□□ -0.33
CERS3-208	ENST00000560944	ATP2A1	O14983	1001 aa		13	□□□□□ -0.33
CERS3-208	ENST00000560944	CDKL5	O76039	1030 aa		13	□□□□□ -0.33
CERS3-208	ENST00000560944	DEXI	O95424	95 aa		13	□□□□□ -0.33
CERS3-208	ENST00000560944	SMARCA1	P28370	1054 aa		13	□□□□□ -0.33
CERS3-208	ENST00000560944	PSMC4	P43686	418 aa		13	□□□□□ -0.33
CERS3-208	ENST00000560944	NAPA	P54920	295 aa		13	□□□□□ -0.33
CERS3-208	ENST00000560944	CNTN2	Q02246	1040 aa		13	□□□□□ -0.33
CERS3-208	ENST00000560944	SP3	Q02447	781 aa		13	□□□□□ -0.33
CERS3-208	ENST00000560944	NPY5R	Q15761	445 aa		13	□□□□□ -0.33
CERS3-208	ENST00000560944	USP17L6P	Q6QN14	398 aa		13	□□□□□ -0.33
CERS3-208	ENST00000560944	TRIM22	Q8IYM9	498 aa		13	□□□□□ -0.33
CERS3-208	ENST00000560944	OXER1	Q8TDS5	423 aa		13	□□□□□ -0.33
CERS3-208	ENST00000560944	GTF3C2	Q8WUA4	911 aa	Predicted RBP	13	□□□□□ -0.33
CERS3-208	ENST00000560944	FGD4	Q96M96	766 aa		13	□□□□□ -0.33
CERS3-208	ENST00000560944	A1CF	Q9NQ94	594 aa	Known RBP	13	□□□□□ -0.33
CERS3-208	ENST00000560944	BARHL2	Q9NY43	387 aa		13	□□□□□ -0.33
CERS3-208	ENST00000560944	ZNFX1	Q9P2E3	1918 aa	Known RBP	13	□□□□□ -0.33
CERS3-208	ENST00000560944	LRRC37A2	A6NM11	1700 aa		12.99	□□□□□ -0.33
CERS3-208	ENST00000560944	ABCB11	O95342	1321 aa		12.99	□□□□□ -0.33
CERS3-208	ENST00000560944	COBL	O75128	1261 aa		12.99	□□□□□ -0.33
CERS3-208	ENST00000560944	CALML3	P27482	149 aa		12.99	□□□□□ -0.33
CERS3-208	ENST00000560944	LBX1	P52954	281 aa		12.99	□□□□□ -0.33
CERS3-208	ENST00000560944	OAZ1	P54368	228 aa		12.99	□□□□□ -0.33
CERS3-208	ENST00000560944	AKAP17A	Q02040	695 aa	Known RBP	12.99	□□□□□ -0.33
CERS3-208	ENST00000560944	PRKCZ	Q05513	592 aa		12.99	□□□□□ -0.33
CERS3-208	ENST00000560944	BAAT	Q14032	418 aa	Predicted RBP	12.99	□□□□□ -0.33
CERS3-208	ENST00000560944	PPP2R5B	Q15173	497 aa		12.99	□□□□□ -0.33
CERS3-208	ENST00000560944	CPLX2	Q6PUV4	134 aa	Known RBP	12.99	□□□□□ -0.33
CERS3-208	ENST00000560944	PLEKHH3	Q7Z736	793 aa		12.99	□□□□□ -0.33
CERS3-208	ENST00000560944	ZFP91	Q96JP5	570 aa	Predicted RBP	12.99	□□□□□ -0.33
CERS3-208	ENST00000560944	BEGAIN	Q9BUH8	593 aa		12.99	□□□□□ -0.33
CERS3-208	ENST00000560944	ACAD9	Q9H845	621 aa		12.99	□□□□□ -0.33
CERS3-208	ENST00000560944	SMC3	Q9UQE7	1217 aa		12.99	□□□□□ -0.33
CERS3-208	ENST00000560944	MCM3AP	O60318	1980 aa		12.98	□□□□□ -0.33
CERS3-208	ENST00000560944	PLXNA1	Q9UIW2	1896 aa		12.98	□□□□□ -0.33
CERS3-208	ENST00000560944	ZNF236	Q9UL36	1845 aa		12.98	□□□□□ -0.33
CERS3-208	ENST00000560944	FKTN	O75072	461 aa		12.98	□□□□□ -0.33
CERS3-208	ENST00000560944	CFB	P00751	764 aa		12.98	□□□□□ -0.33
CERS3-208	ENST00000560944	ADORA2A	P29274	412 aa		12.98	□□□□□ -0.33
CERS3-208	ENST00000560944	UBXN2A	P68543	259 aa		12.98	□□□□□ -0.33
CERS3-208	ENST00000560944	CCL14	Q16627	93 aa		12.98	□□□□□ -0.33
CERS3-208	ENST00000560944	IL31RA	Q8NI17	732 aa		12.98	□□□□□ -0.33
CERS3-208	ENST00000560944	NPLOC4	Q8TAT6	608 aa		12.98	□□□□□ -0.33
CERS3-208	ENST00000560944	MMP19	Q99542	508 aa		12.98	□□□□□ -0.33
CERS3-208	ENST00000560944	LLPH	Q9BRT6	129 aa	Known RBP	12.98	□□□□□ -0.33
CERS3-208	ENST00000560944	CWC22	Q9HCG8	908 aa	Known RBP	12.98	□□□□□ -0.33
CERS3-208	ENST00000560944	KIF28P	B7ZC32	967 aa		12.97	□□□□□ -0.33
CERS3-208	ENST00000560944	TNPO2	O14787	897 aa	Known RBP	12.97	□□□□□ -0.33
CERS3-208	ENST00000560944	FDX1	P10109	184 aa		12.97	□□□□□ -0.33
CERS3-208	ENST00000560944	PTPRE	P23469	700 aa		12.97	□□□□□ -0.33
CERS3-208	ENST00000560944	RPS6	P62753	249 aa	Known RBP	12.97	□□□□□ -0.33
CERS3-208	ENST00000560944	CCNA1	P78396	465 aa		12.97	□□□□□ -0.33
CERS3-208	ENST00000560944	NR5A1	Q13285	461 aa		12.97	□□□□□ -0.33
CERS3-208	ENST00000560944	PKP1	Q13835	747 aa		12.97	□□□□□ -0.33
CERS3-208	ENST00000560944	GRB14	Q14449	540 aa		12.97	□□□□□ -0.33
CERS3-208	ENST00000560944	EARS2	Q5JPH6	523 aa	Known RBP	12.97	□□□□□ -0.33
CERS3-208	ENST00000560944	MORN1	Q5T089	497 aa		12.97	□□□□□ -0.33
CERS3-208	ENST00000560944	FOXD4L5	Q5VV16	416 aa	Predicted RBP	12.97	□□□□□ -0.33
CERS3-208	ENST00000560944	JAKMIP3	Q5VZ66	844 aa		12.97	□□□□□ -0.33
CERS3-208	ENST00000560944	FCHSD1	Q86WN1	690 aa		12.97	□□□□□ -0.33
CERS3-208	ENST00000560944	SHCBP1	Q8NEM2	672 aa		12.97	□□□□□ -0.33
CERS3-208	ENST00000560944	SYTL5	Q8TDW5	730 aa	Predicted RBP	12.97	□□□□□ -0.33
CERS3-208	ENST00000560944	FOXD4L4	Q8WXT5	416 aa	Predicted RBP	12.97	□□□□□ -0.33
CERS3-208	ENST00000560944	CYP39A1	Q9NYL5	469 aa		12.97	□□□□□ -0.33

Retrieved 100 of 20,778 RNA–protein pairs in 10.8 ms