RNA–Protein interactions for RNA: ENST00000560856.5

SNRPA1-213, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 4

Gene SNRPA1, Length 588 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-213ENST00000560856 CYTH3O43739 400 aa17.8■□□□□ 0.44
SNRPA1-213ENST00000560856 DDAH1O94760 285 aa17.8■□□□□ 0.44
SNRPA1-213ENST00000560856 QRICH1Q2TAL8 776 aa17.8■□□□□ 0.44
SNRPA1-213ENST00000560856 PRAMEF19Q5SWL8 479 aa17.8■□□□□ 0.44
SNRPA1-213ENST00000560856 VAT1LQ9HCJ6 419 aa17.8■□□□□ 0.44
SNRPA1-213ENST00000560856 CYP39A1Q9NYL5 469 aa17.8■□□□□ 0.44
SNRPA1-213ENST00000560856 PNMA2Q9UL42 364 aa17.8■□□□□ 0.44
SNRPA1-213ENST00000560856 PDE4DIPQ5VU43 2346 aa17.8■□□□□ 0.44
SNRPA1-213ENST00000560856 ASTN1O14525 1302 aa17.79■□□□□ 0.44
SNRPA1-213ENST00000560856 TNRC18O15417 2968 aaPredicted RBP17.79■□□□□ 0.44
SNRPA1-213ENST00000560856 SNAI1O95863 264 aaPredicted RBP17.79■□□□□ 0.44
SNRPA1-213ENST00000560856 CPA1P15085 419 aa17.79■□□□□ 0.44
SNRPA1-213ENST00000560856 CAPN2P17655 700 aa17.79■□□□□ 0.44
SNRPA1-213ENST00000560856 MNX1P50219 401 aaPredicted RBP17.79■□□□□ 0.44
SNRPA1-213ENST00000560856 MSL3Q8N5Y2 521 aaKnown RBP17.79■□□□□ 0.44
SNRPA1-213ENST00000560856 OGDHLQ9ULD0 1010 aa17.79■□□□□ 0.44
SNRPA1-213ENST00000560856 PFASO15067 1338 aa17.78■□□□□ 0.44
SNRPA1-213ENST00000560856 POTEB2H3BUK9 544 aa17.78■□□□□ 0.44
SNRPA1-213ENST00000560856 PPP1R11O60927 126 aaPredicted RBP17.78■□□□□ 0.44
SNRPA1-213ENST00000560856 BAATQ14032 418 aaPredicted RBP17.78■□□□□ 0.44
SNRPA1-213ENST00000560856 NUP133Q8WUM0 1156 aa17.78■□□□□ 0.44
SNRPA1-213ENST00000560856 PURBQ96QR8 312 aaKnown RBP17.78■□□□□ 0.44
SNRPA1-213ENST00000560856 NRBP1Q9UHY1 535 aa17.78■□□□□ 0.44
SNRPA1-213ENST00000560856 SYNGAP1Q96PV0 1343 aa17.77■□□□□ 0.44
SNRPA1-213ENST00000560856 LCTP09848 1927 aa17.77■□□□□ 0.44
SNRPA1-213ENST00000560856 CCDC69A6NI79 296 aa17.77■□□□□ 0.44
SNRPA1-213ENST00000560856 TFRCP02786 760 aaKnown RBP17.77■□□□□ 0.44
SNRPA1-213ENST00000560856 HMGB1P09429 215 aaKnown RBP17.77■□□□□ 0.44
SNRPA1-213ENST00000560856 ZNF865P0CJ78 1059 aaPredicted RBP17.77■□□□□ 0.44
SNRPA1-213ENST00000560856 NSMFQ6X4W1 530 aa17.77■□□□□ 0.44
SNRPA1-213ENST00000560856 NFXL1Q6ZNB6 911 aa17.77■□□□□ 0.44
SNRPA1-213ENST00000560856 RGS22Q8NE09 1264 aa17.77■□□□□ 0.44
SNRPA1-213ENST00000560856 JAKMIP1Q96N16 626 aaKnown RBP17.77■□□□□ 0.44
SNRPA1-213ENST00000560856 DDX20Q9UHI6 824 aaKnown RBP17.77■□□□□ 0.44
SNRPA1-213ENST00000560856 BRPF3Q9ULD4 1205 aa17.77■□□□□ 0.44
SNRPA1-213ENST00000560856 ZBTB5O15062 677 aa17.76■□□□□ 0.43
SNRPA1-213ENST00000560856 SEPT4O43236 478 aa17.76■□□□□ 0.43
SNRPA1-213ENST00000560856 DHX16O60231 1041 aaKnown RBP17.76■□□□□ 0.43
SNRPA1-213ENST00000560856 RXRAP19793 462 aa17.76■□□□□ 0.43
SNRPA1-213ENST00000560856 SMARCA1P28370 1054 aa17.76■□□□□ 0.43
SNRPA1-213ENST00000560856 USH1GQ495M9 461 aa17.76■□□□□ 0.43
SNRPA1-213ENST00000560856 APOA5Q6Q788 366 aa17.76■□□□□ 0.43
SNRPA1-213ENST00000560856 FBXO11Q86XK2 927 aa17.76■□□□□ 0.43
SNRPA1-213ENST00000560856 RAB11FIP4Q86YS3 637 aa17.76■□□□□ 0.43
SNRPA1-213ENST00000560856 FBXL16Q8N461 479 aa17.76■□□□□ 0.43
SNRPA1-213ENST00000560856 TBC1D5Q92609 795 aa17.76■□□□□ 0.43
SNRPA1-213ENST00000560856 PIGSQ96S52 555 aa17.76■□□□□ 0.43
SNRPA1-213ENST00000560856 AGXT2Q9BYV1 514 aa17.76■□□□□ 0.43
SNRPA1-213ENST00000560856 KATNBL1Q9H079 304 aa17.76■□□□□ 0.43
SNRPA1-213ENST00000560856 SLC12A7Q9Y666 1083 aa17.76■□□□□ 0.43
SNRPA1-213ENST00000560856 ABCB11O95342 1321 aa17.75■□□□□ 0.43
SNRPA1-213ENST00000560856 MCM3APO60318 1980 aa17.75■□□□□ 0.43
SNRPA1-213ENST00000560856 OPLAHO14841 1288 aa17.75■□□□□ 0.43
SNRPA1-213ENST00000560856 PLEKHA8P1O95397 391 aa17.75■□□□□ 0.43
SNRPA1-213ENST00000560856 RPS6P62753 249 aaKnown RBP17.75■□□□□ 0.43
SNRPA1-213ENST00000560856 SLC30A10Q6XR72 485 aa17.75■□□□□ 0.43
SNRPA1-213ENST00000560856 ARMCX2Q7L311 632 aa17.75■□□□□ 0.43
SNRPA1-213ENST00000560856 SRBD1Q8N5C6 995 aaKnown RBP17.75■□□□□ 0.43
SNRPA1-213ENST00000560856 FANCBQ8NB91 859 aa17.75■□□□□ 0.43
SNRPA1-213ENST00000560856 CTCFLQ8NI51 663 aaPredicted RBP17.75■□□□□ 0.43
SNRPA1-213ENST00000560856 MORC4Q8TE76 937 aa17.75■□□□□ 0.43
SNRPA1-213ENST00000560856 SPZ1Q9BXG8 430 aa17.75■□□□□ 0.43
SNRPA1-213ENST00000560856 AMNQ9BXJ7 453 aa17.75■□□□□ 0.43
SNRPA1-213ENST00000560856 CDKN2AIPQ9NXV6 580 aaPredicted RBP17.75■□□□□ 0.43
SNRPA1-213ENST00000560856 DDX49Q9Y6V7 483 aaKnown RBP17.75■□□□□ 0.43
SNRPA1-213ENST00000560856 FARP2O94887 1054 aaPredicted RBP17.74■□□□□ 0.43
SNRPA1-213ENST00000560856 CALM1P0DP23 149 aa17.74■□□□□ 0.43
SNRPA1-213ENST00000560856 CALM2P0DP24 149 aa17.74■□□□□ 0.43
SNRPA1-213ENST00000560856 CALM3P0DP25 149 aa17.74■□□□□ 0.43
SNRPA1-213ENST00000560856 RPS6KB1P23443 525 aa17.74■□□□□ 0.43
SNRPA1-213ENST00000560856 CNGA1P29973 690 aa17.74■□□□□ 0.43
SNRPA1-213ENST00000560856 KIF5BP33176 963 aa17.74■□□□□ 0.43
SNRPA1-213ENST00000560856 BLOC1S2Q6QNY1 142 aa17.74■□□□□ 0.43
SNRPA1-213ENST00000560856 CCDC144CPQ8IYA2 1237 aa17.74■□□□□ 0.43
SNRPA1-213ENST00000560856 ANKLE1Q8NAG6 615 aa17.74■□□□□ 0.43
SNRPA1-213ENST00000560856 DIS3LQ8TF46 1054 aaKnown RBP17.74■□□□□ 0.43
SNRPA1-213ENST00000560856 MAF1Q9H063 256 aa17.74■□□□□ 0.43
SNRPA1-213ENST00000560856 ZSWIM6Q9HCJ5 1215 aa17.74■□□□□ 0.43
SNRPA1-213ENST00000560856 FAM217BQ9NTX9 383 aaPredicted RBP17.74■□□□□ 0.43
SNRPA1-213ENST00000560856 MYH6P13533 1939 aa17.73■□□□□ 0.43
SNRPA1-213ENST00000560856 PNMA6FA0A0J9YX94 578 aa17.73■□□□□ 0.43
SNRPA1-213ENST00000560856 MSCO60682 206 aa17.73■□□□□ 0.43
SNRPA1-213ENST00000560856 SEC24BO95487 1268 aa17.73■□□□□ 0.43
SNRPA1-213ENST00000560856 GNAQP50148 359 aa17.73■□□□□ 0.43
SNRPA1-213ENST00000560856 GHRHRQ02643 423 aa17.73■□□□□ 0.43
SNRPA1-213ENST00000560856 RNF207Q6ZRF8 634 aa17.73■□□□□ 0.43
SNRPA1-213ENST00000560856 Q6ZUG5 572 aa17.73■□□□□ 0.43
SNRPA1-213ENST00000560856 HOMER1Q86YM7 354 aa17.73■□□□□ 0.43
SNRPA1-213ENST00000560856 LZTS2Q9BRK4 669 aa17.73■□□□□ 0.43
SNRPA1-213ENST00000560856 TM6SF1Q9BZW5 370 aa17.73■□□□□ 0.43
SNRPA1-213ENST00000560856 MRPL11Q9Y3B7 192 aaKnown RBP17.73■□□□□ 0.43
SNRPA1-213ENST00000560856 PTPDC1A2A3K4 754 aa17.72■□□□□ 0.43
SNRPA1-213ENST00000560856 ASB14A6NK59 587 aa17.72■□□□□ 0.43
SNRPA1-213ENST00000560856 CASTP20810 708 aaKnown RBP17.72■□□□□ 0.43
SNRPA1-213ENST00000560856 PSMA5P28066 241 aa17.72■□□□□ 0.43
SNRPA1-213ENST00000560856 FUT2Q10981 343 aa17.72■□□□□ 0.43
SNRPA1-213ENST00000560856 ACVR2BQ13705 512 aa17.72■□□□□ 0.43
SNRPA1-213ENST00000560856 ANO1Q5XXA6 986 aa17.72■□□□□ 0.43
SNRPA1-213ENST00000560856 TMTC3Q6ZXV5 915 aa17.72■□□□□ 0.43
SNRPA1-213ENST00000560856 MICU3Q86XE3 530 aa17.72■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 81 ms