RNA–Protein interactions for RNA: ENST00000560825.5

GABPB1-210, Transcript of GA binding protein transcription factor subunit beta 1, humanhuman

TSL 1 (best) BASIC

Gene GABPB1, Length 1,412 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABPB1-210ENST00000560825 ACAD9Q9H845 621 aa13.19□□□□□ -0.3
GABPB1-210ENST00000560825 DIAPH3Q9NSV4 1193 aa13.19□□□□□ -0.3
GABPB1-210ENST00000560825 CYP39A1Q9NYL5 469 aa13.19□□□□□ -0.3
GABPB1-210ENST00000560825 PHF24Q9UPV7 400 aa13.19□□□□□ -0.3
GABPB1-210ENST00000560825 A0A0C4DFX4 3053 aa13.18□□□□□ -0.3
GABPB1-210ENST00000560825 KBTBD13C9JR72 458 aa13.18□□□□□ -0.3
GABPB1-210ENST00000560825 SNHG28P0DPA3 235 aa13.18□□□□□ -0.3
GABPB1-210ENST00000560825 RARBP10826 455 aa13.18□□□□□ -0.3
GABPB1-210ENST00000560825 AKR1A1P14550 325 aa13.18□□□□□ -0.3
GABPB1-210ENST00000560825 COPB2P35606 906 aa13.18□□□□□ -0.3
GABPB1-210ENST00000560825 SLC30A10Q6XR72 485 aa13.18□□□□□ -0.3
GABPB1-210ENST00000560825 ARRDC4Q8NCT1 418 aa13.18□□□□□ -0.3
GABPB1-210ENST00000560825 KLHDC9Q8NEP7 349 aa13.18□□□□□ -0.3
GABPB1-210ENST00000560825 CHURC1Q8WUH1 139 aa13.18□□□□□ -0.3
GABPB1-210ENST00000560825 DCAF4Q8WV16 495 aa13.18□□□□□ -0.3
GABPB1-210ENST00000560825 CLEC4DQ8WXI8 215 aa13.18□□□□□ -0.3
GABPB1-210ENST00000560825 UBE2OQ9C0C9 1292 aaKnown RBP13.18□□□□□ -0.3
GABPB1-210ENST00000560825 UBA5Q9GZZ9 404 aa13.18□□□□□ -0.3
GABPB1-210ENST00000560825 SENP2Q9HC62 589 aa13.18□□□□□ -0.3
GABPB1-210ENST00000560825 PDLIM7Q9NR12 457 aa13.18□□□□□ -0.3
GABPB1-210ENST00000560825 ZSWIM5Q9P217 1185 aa13.18□□□□□ -0.3
GABPB1-210ENST00000560825 CTDP1Q9Y5B0 961 aaPredicted RBP13.18□□□□□ -0.3
GABPB1-210ENST00000560825 ICAM1P05362 532 aa13.17□□□□□ -0.3
GABPB1-210ENST00000560825 EPHB4P54760 987 aa13.17□□□□□ -0.3
GABPB1-210ENST00000560825 BEX3Q00994 111 aa13.17□□□□□ -0.3
GABPB1-210ENST00000560825 TLE2Q04725 743 aa13.17□□□□□ -0.3
GABPB1-210ENST00000560825 ZNF543Q08ER8 600 aa13.17□□□□□ -0.3
GABPB1-210ENST00000560825 KCNA10Q16322 511 aa13.17□□□□□ -0.3
GABPB1-210ENST00000560825 C9orf50Q5SZB4 431 aa13.17□□□□□ -0.3
GABPB1-210ENST00000560825 SYDE2Q5VT97 1194 aa13.17□□□□□ -0.3
GABPB1-210ENST00000560825 CYB5R4Q7L1T6 521 aa13.17□□□□□ -0.3
GABPB1-210ENST00000560825 EEPD1Q7L9B9 569 aa13.17□□□□□ -0.3
GABPB1-210ENST00000560825 ZNF467Q7Z7K2 595 aaPredicted RBP13.17□□□□□ -0.3
GABPB1-210ENST00000560825 FBXO16Q8IX29 292 aaPredicted RBP13.17□□□□□ -0.3
GABPB1-210ENST00000560825 ENAHQ8N8S7 591 aaPredicted RBP13.17□□□□□ -0.3
GABPB1-210ENST00000560825 TBC1D5Q92609 795 aa13.17□□□□□ -0.3
GABPB1-210ENST00000560825 NRBP1Q9UHY1 535 aa13.17□□□□□ -0.3
GABPB1-210ENST00000560825 CCPG1Q9ULG6 757 aa13.17□□□□□ -0.3
GABPB1-210ENST00000560825 CNPY2Q9Y2B0 182 aa13.17□□□□□ -0.3
GABPB1-210ENST00000560825 KIAA1217Q5T5P2 1943 aa13.17□□□□□ -0.3
GABPB1-210ENST00000560825 GBF1Q92538 1859 aa13.17□□□□□ -0.3
GABPB1-210ENST00000560825 POTEB2H3BUK9 544 aa13.16□□□□□ -0.3
GABPB1-210ENST00000560825 ZNF213O14771 459 aa13.16□□□□□ -0.3
GABPB1-210ENST00000560825 ACLYP53396 1101 aa13.16□□□□□ -0.3
GABPB1-210ENST00000560825 BAATQ14032 418 aaPredicted RBP13.16□□□□□ -0.3
GABPB1-210ENST00000560825 SLC35G1Q2M3R5 365 aa13.16□□□□□ -0.3
GABPB1-210ENST00000560825 TAPT1Q6NXT6 567 aa13.16□□□□□ -0.3
GABPB1-210ENST00000560825 NSMFQ6X4W1 530 aa13.16□□□□□ -0.3
GABPB1-210ENST00000560825 TICAM2Q86XR7 235 aa13.16□□□□□ -0.3
GABPB1-210ENST00000560825 TDHQ8IZJ6 230 aa13.16□□□□□ -0.3
GABPB1-210ENST00000560825 PPP1R13LQ8WUF5 828 aa13.16□□□□□ -0.3
GABPB1-210ENST00000560825 BADQ92934 168 aa13.16□□□□□ -0.3
GABPB1-210ENST00000560825 PRDM5Q9NQX1 630 aaPredicted RBP13.16□□□□□ -0.3
GABPB1-210ENST00000560825 A0A1W2PPC1 479 aa13.15□□□□□ -0.3
GABPB1-210ENST00000560825 SMPD1P17405 629 aa13.15□□□□□ -0.3
GABPB1-210ENST00000560825 CHMLP26374 656 aa13.15□□□□□ -0.3
GABPB1-210ENST00000560825 STOX1Q6ZVD7 989 aa13.15□□□□□ -0.3
GABPB1-210ENST00000560825 MSL3Q8N5Y2 521 aaKnown RBP13.15□□□□□ -0.3
GABPB1-210ENST00000560825 DSCC1Q9BVC3 393 aa13.15□□□□□ -0.3
GABPB1-210ENST00000560825 FBXO40Q9UH90 709 aa13.15□□□□□ -0.3
GABPB1-210ENST00000560825 FAM184BQ9ULE4 1060 aa13.15□□□□□ -0.3
GABPB1-210ENST00000560825 BAZ2BQ9UIF8 2168 aaKnown RBP13.15□□□□□ -0.3
GABPB1-210ENST00000560825 VCANP13611 3396 aa13.15□□□□□ -0.3
GABPB1-210ENST00000560825 DOCK5Q9H7D0 1870 aa13.15□□□□□ -0.3
GABPB1-210ENST00000560825 PQBP1O60828 265 aaKnown RBP13.14□□□□□ -0.31
GABPB1-210ENST00000560825 DUSP11O75319 330 aaKnown RBP13.14□□□□□ -0.31
GABPB1-210ENST00000560825 ASGR1P07306 291 aa13.14□□□□□ -0.31
GABPB1-210ENST00000560825 C6orf222P0C671 652 aaPredicted RBP13.14□□□□□ -0.31
GABPB1-210ENST00000560825 FAAP100Q0VG06 881 aa13.14□□□□□ -0.31
GABPB1-210ENST00000560825 STAG2Q8N3U4 1231 aa13.14□□□□□ -0.31
GABPB1-210ENST00000560825 ZSCAN10Q96SZ4 725 aaPredicted RBP13.14□□□□□ -0.31
GABPB1-210ENST00000560825 UPF3AQ9H1J1 476 aaKnown RBP13.14□□□□□ -0.31
GABPB1-210ENST00000560825 ABHD16BQ9H3Z7 469 aa13.14□□□□□ -0.31
GABPB1-210ENST00000560825 GNEQ9Y223 722 aaKnown RBP13.14□□□□□ -0.31
GABPB1-210ENST00000560825 CHD7Q9P2D1 2997 aa13.14□□□□□ -0.31
GABPB1-210ENST00000560825 GRIN2DO15399 1336 aa13.14□□□□□ -0.31
GABPB1-210ENST00000560825 TNKSO95271 1327 aa13.14□□□□□ -0.31
GABPB1-210ENST00000560825 MYH7BA7E2Y1 1941 aa13.14□□□□□ -0.31
GABPB1-210ENST00000560825 SCN5AQ14524 2016 aa13.14□□□□□ -0.31
GABPB1-210ENST00000560825 CYP21A2P08686 494 aa13.13□□□□□ -0.31
GABPB1-210ENST00000560825 FDX1P10109 184 aa13.13□□□□□ -0.31
GABPB1-210ENST00000560825 GJA9P57773 515 aa13.13□□□□□ -0.31
GABPB1-210ENST00000560825 SEC23AQ15436 765 aa13.13□□□□□ -0.31
GABPB1-210ENST00000560825 SHHQ15465 462 aa13.13□□□□□ -0.31
GABPB1-210ENST00000560825 USH1GQ495M9 461 aa13.13□□□□□ -0.31
GABPB1-210ENST00000560825 C1orf53Q5VUE5 145 aa13.13□□□□□ -0.31
GABPB1-210ENST00000560825 CHST3Q7LGC8 479 aa13.13□□□□□ -0.31
GABPB1-210ENST00000560825 RNF180Q86T96 592 aa13.13□□□□□ -0.31
GABPB1-210ENST00000560825 PNMA1Q8ND90 353 aa13.13□□□□□ -0.31
GABPB1-210ENST00000560825 ESR2Q92731 530 aa13.13□□□□□ -0.31
GABPB1-210ENST00000560825 TTC14Q96N46 770 aa13.13□□□□□ -0.31
GABPB1-210ENST00000560825 COL20A1Q9P218 1284 aa13.13□□□□□ -0.31
GABPB1-210ENST00000560825 PPP1R11O60927 126 aaPredicted RBP13.13□□□□□ -0.31
GABPB1-210ENST00000560825 TKFCQ3LXA3 575 aa13.13□□□□□ -0.31
GABPB1-210ENST00000560825 LRIT3Q3SXY7 679 aa13.13□□□□□ -0.31
GABPB1-210ENST00000560825 ANKS1AQ92625 1134 aa13.13□□□□□ -0.31
GABPB1-210ENST00000560825 GPHNQ9NQX3 736 aaPredicted RBP13.13□□□□□ -0.31
GABPB1-210ENST00000560825 SPTBN5Q9NRC6 3674 aaKnown RBP13.12□□□□□ -0.31
GABPB1-210ENST00000560825 PTPDC1A2A3K4 754 aa13.12□□□□□ -0.31
GABPB1-210ENST00000560825 OPLAHO14841 1288 aa13.12□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms