RNA–Protein interactions for RNA: ENST00000560383.5

SNRPA1-210, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 4

Gene SNRPA1, Length 565 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-210ENST00000560383 KAT14Q9H8E8 782 aa17.78■□□□□ 0.44
SNRPA1-210ENST00000560383 GPCPD1Q9NPB8 672 aa17.78■□□□□ 0.44
SNRPA1-210ENST00000560383 ATP11BQ9Y2G3 1177 aa17.78■□□□□ 0.44
SNRPA1-210ENST00000560383 FRMPD2Q68DX3 1309 aaPredicted RBP17.77■□□□□ 0.44
SNRPA1-210ENST00000560383 ADAMTS4O75173 837 aa17.77■□□□□ 0.44
SNRPA1-210ENST00000560383 STOX1Q6ZVD7 989 aa17.77■□□□□ 0.44
SNRPA1-210ENST00000560383 ANKRD35Q8N283 1001 aa17.77■□□□□ 0.44
SNRPA1-210ENST00000560383 NCOA7Q8NI08 942 aa17.77■□□□□ 0.44
SNRPA1-210ENST00000560383 TSEN34Q9BSV6 310 aaKnown RBP17.77■□□□□ 0.44
SNRPA1-210ENST00000560383 RNF146Q9NTX7 359 aa17.77■□□□□ 0.44
SNRPA1-210ENST00000560383 LRRC37A2A6NM11 1700 aa17.77■□□□□ 0.44
SNRPA1-210ENST00000560383 SNAI1O95863 264 aaPredicted RBP17.76■□□□□ 0.43
SNRPA1-210ENST00000560383 MYCNP04198 464 aaPredicted RBP17.76■□□□□ 0.43
SNRPA1-210ENST00000560383 SLC4A3P48751 1232 aa17.76■□□□□ 0.43
SNRPA1-210ENST00000560383 SNAP25P60880 206 aa17.76■□□□□ 0.43
SNRPA1-210ENST00000560383 NECTIN1Q15223 517 aa17.76■□□□□ 0.43
SNRPA1-210ENST00000560383 TRIM60Q495X7 471 aa17.76■□□□□ 0.43
SNRPA1-210ENST00000560383 FGD4Q96M96 766 aa17.76■□□□□ 0.43
SNRPA1-210ENST00000560383 TRERF1Q96PN7 1200 aa17.76■□□□□ 0.43
SNRPA1-210ENST00000560383 A1CFQ9NQ94 594 aaKnown RBP17.76■□□□□ 0.43
SNRPA1-210ENST00000560383 PNMA2Q9UL42 364 aa17.76■□□□□ 0.43
SNRPA1-210ENST00000560383 FAM184BQ9ULE4 1060 aa17.76■□□□□ 0.43
SNRPA1-210ENST00000560383 SYNRGQ9UMZ2 1314 aa17.75■□□□□ 0.43
SNRPA1-210ENST00000560383 A0A1W2PQ45 241 aaPredicted RBP17.75■□□□□ 0.43
SNRPA1-210ENST00000560383 A0A1W2PQY0 241 aa17.75■□□□□ 0.43
SNRPA1-210ENST00000560383 DUSP11O75319 330 aaKnown RBP17.75■□□□□ 0.43
SNRPA1-210ENST00000560383 CDC45O75419 566 aa17.75■□□□□ 0.43
SNRPA1-210ENST00000560383 PGK1P00558 417 aa17.75■□□□□ 0.43
SNRPA1-210ENST00000560383 ASPRV1Q53RT3 343 aa17.75■□□□□ 0.43
SNRPA1-210ENST00000560383 IFIT1BQ5T764 474 aaKnown RBP17.75■□□□□ 0.43
SNRPA1-210ENST00000560383 CCDC174Q6PII3 467 aa17.75■□□□□ 0.43
SNRPA1-210ENST00000560383 RALYLQ86SE5 291 aaKnown RBP17.75■□□□□ 0.43
SNRPA1-210ENST00000560383 MB21D2Q8IYB1 491 aaPredicted RBP17.75■□□□□ 0.43
SNRPA1-210ENST00000560383 FAM133AQ8N9E0 248 aa17.75■□□□□ 0.43
SNRPA1-210ENST00000560383 ABHD16BQ9H3Z7 469 aa17.75■□□□□ 0.43
SNRPA1-210ENST00000560383 PDLIM7Q9NR12 457 aa17.75■□□□□ 0.43
SNRPA1-210ENST00000560383 HOMER2Q9NSB8 354 aa17.75■□□□□ 0.43
SNRPA1-210ENST00000560383 CDKN2AIPQ9NXV6 580 aaPredicted RBP17.75■□□□□ 0.43
SNRPA1-210ENST00000560383 CCPG1Q9ULG6 757 aa17.75■□□□□ 0.43
SNRPA1-210ENST00000560383 WDR19Q8NEZ3 1342 aa17.74■□□□□ 0.43
SNRPA1-210ENST00000560383 MOXD2PA6NHM9 499 aa17.74■□□□□ 0.43
SNRPA1-210ENST00000560383 ALAS1P13196 640 aa17.74■□□□□ 0.43
SNRPA1-210ENST00000560383 CST5P28325 142 aaPredicted RBP17.74■□□□□ 0.43
SNRPA1-210ENST00000560383 ACVR2BQ13705 512 aa17.74■□□□□ 0.43
SNRPA1-210ENST00000560383 MUM1L1Q5H9M0 696 aa17.74■□□□□ 0.43
SNRPA1-210ENST00000560383 FERMT2Q96AC1 680 aa17.74■□□□□ 0.43
SNRPA1-210ENST00000560383 MTA3Q9BTC8 594 aa17.74■□□□□ 0.43
SNRPA1-210ENST00000560383 ANO2Q9NQ90 1003 aa17.74■□□□□ 0.43
SNRPA1-210ENST00000560383 ZHX1Q9UKY1 873 aaPredicted RBP17.74■□□□□ 0.43
SNRPA1-210ENST00000560383 SLC27A2O14975 620 aa17.73■□□□□ 0.43
SNRPA1-210ENST00000560383 CENPBP07199 599 aaPredicted RBP17.73■□□□□ 0.43
SNRPA1-210ENST00000560383 PARP1P09874 1014 aaKnown RBP17.73■□□□□ 0.43
SNRPA1-210ENST00000560383 GOLGA8HP0CJ92 632 aa17.73■□□□□ 0.43
SNRPA1-210ENST00000560383 ANTXR2P58335 489 aa17.73■□□□□ 0.43
SNRPA1-210ENST00000560383 ARMCX2Q7L311 632 aa17.73■□□□□ 0.43
SNRPA1-210ENST00000560383 KLHDC9Q8NEP7 349 aa17.73■□□□□ 0.43
SNRPA1-210ENST00000560383 NUP133Q8WUM0 1156 aa17.73■□□□□ 0.43
SNRPA1-210ENST00000560383 LENG1Q96BZ8 264 aaPredicted RBP17.73■□□□□ 0.43
SNRPA1-210ENST00000560383 LCTP09848 1927 aa17.72■□□□□ 0.43
SNRPA1-210ENST00000560383 POTEB2H3BUK9 544 aa17.72■□□□□ 0.43
SNRPA1-210ENST00000560383 IFIT3O14879 490 aaKnown RBP17.72■□□□□ 0.43
SNRPA1-210ENST00000560383 ACLYP53396 1101 aa17.72■□□□□ 0.43
SNRPA1-210ENST00000560383 SART3Q15020 963 aaKnown RBP17.72■□□□□ 0.43
SNRPA1-210ENST00000560383 CREB3L3Q68CJ9 461 aa17.72■□□□□ 0.43
SNRPA1-210ENST00000560383 CCSAPQ6IQ19 270 aaPredicted RBP17.72■□□□□ 0.43
SNRPA1-210ENST00000560383 CASC1Q6TDU7 716 aa17.72■□□□□ 0.43
SNRPA1-210ENST00000560383 DEFB123Q8N688 67 aa17.72■□□□□ 0.43
SNRPA1-210ENST00000560383 IGDCC4Q8TDY8 1250 aa17.72■□□□□ 0.43
SNRPA1-210ENST00000560383 UBA5Q9GZZ9 404 aa17.72■□□□□ 0.43
SNRPA1-210ENST00000560383 KATNBL1Q9H079 304 aa17.72■□□□□ 0.43
SNRPA1-210ENST00000560383 UPF3AQ9H1J1 476 aaKnown RBP17.72■□□□□ 0.43
SNRPA1-210ENST00000560383 PRDM5Q9NQX1 630 aaPredicted RBP17.72■□□□□ 0.43
SNRPA1-210ENST00000560383 PPP4R2Q9NY27 417 aa17.72■□□□□ 0.43
SNRPA1-210ENST00000560383 CYP39A1Q9NYL5 469 aa17.72■□□□□ 0.43
SNRPA1-210ENST00000560383 ERICH2A1L162 156 aa17.71■□□□□ 0.43
SNRPA1-210ENST00000560383 CLTBP09497 229 aa17.71■□□□□ 0.43
SNRPA1-210ENST00000560383 NKX3-2P78367 333 aa17.71■□□□□ 0.43
SNRPA1-210ENST00000560383 CNTN2Q02246 1040 aa17.71■□□□□ 0.43
SNRPA1-210ENST00000560383 TLE2Q04725 743 aa17.71■□□□□ 0.43
SNRPA1-210ENST00000560383 CCDC144BQ3MJ40 725 aa17.71■□□□□ 0.43
SNRPA1-210ENST00000560383 ANKRD33Q7Z3H0 272 aa17.71■□□□□ 0.43
SNRPA1-210ENST00000560383 CCDC144CPQ8IYA2 1237 aa17.71■□□□□ 0.43
SNRPA1-210ENST00000560383 CLEC4DQ8WXI8 215 aa17.71■□□□□ 0.43
SNRPA1-210ENST00000560383 TOX2Q96NM4 488 aa17.71■□□□□ 0.43
SNRPA1-210ENST00000560383 MAF1Q9H063 256 aa17.71■□□□□ 0.43
SNRPA1-210ENST00000560383 CPVLQ9H3G5 476 aa17.71■□□□□ 0.43
SNRPA1-210ENST00000560383 SPC25Q9HBM1 224 aa17.71■□□□□ 0.43
SNRPA1-210ENST00000560383 SENP2Q9HC62 589 aa17.71■□□□□ 0.43
SNRPA1-210ENST00000560383 A0A0C4DFX4 3053 aa17.71■□□□□ 0.43
SNRPA1-210ENST00000560383 TRIM43BA6NCK2 446 aa17.7■□□□□ 0.42
SNRPA1-210ENST00000560383 PALM3A6NDB9 673 aaPredicted RBP17.7■□□□□ 0.42
SNRPA1-210ENST00000560383 SOWAHBA6NEL2 793 aa17.7■□□□□ 0.42
SNRPA1-210ENST00000560383 ASB14A6NK59 587 aa17.7■□□□□ 0.42
SNRPA1-210ENST00000560383 NFIBO00712 420 aa17.7■□□□□ 0.42
SNRPA1-210ENST00000560383 KIAA0355O15063 1070 aa17.7■□□□□ 0.42
SNRPA1-210ENST00000560383 GJA9P57773 515 aa17.7■□□□□ 0.42
SNRPA1-210ENST00000560383 TROAPQ12815 778 aa17.7■□□□□ 0.42
SNRPA1-210ENST00000560383 WTAPQ15007 396 aa17.7■□□□□ 0.42
SNRPA1-210ENST00000560383 FAM109BQ6ICB4 259 aaPredicted RBP17.7■□□□□ 0.42
SNRPA1-210ENST00000560383 ADGRF4Q8IZF3 695 aa17.7■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 11.8 ms