RNA–Protein interactions for RNA: ENST00000560328.1

NEO1-208, Transcript of neogenin 1, human

TSL 1 (best)

Gene NEO1, Length 5,895 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NEO1-208	ENST00000560328	PLEKHA8P1	O95397	391 aa		10.31	□□□□□ -0.76
NEO1-208	ENST00000560328	STAMBP	O95630	424 aa		10.31	□□□□□ -0.76
NEO1-208	ENST00000560328	CAPN2	P17655	700 aa		10.31	□□□□□ -0.76
NEO1-208	ENST00000560328	STAT1	P42224	750 aa		10.31	□□□□□ -0.76
NEO1-208	ENST00000560328	MIGA2	Q7L4E1	593 aa		10.31	□□□□□ -0.76
NEO1-208	ENST00000560328	DGKH	Q86XP1	1220 aa		10.31	□□□□□ -0.76
NEO1-208	ENST00000560328	LRRC8A	Q8IWT6	810 aa		10.31	□□□□□ -0.76
NEO1-208	ENST00000560328	ZFP91	Q96JP5	570 aa	Predicted RBP	10.31	□□□□□ -0.76
NEO1-208	ENST00000560328	PTPRU	Q92729	1446 aa		10.31	□□□□□ -0.76
NEO1-208	ENST00000560328	C21orf2	O43822	256 aa		10.31	□□□□□ -0.76
NEO1-208	ENST00000560328	ATP2A2	P16615	1042 aa	Known RBP	10.31	□□□□□ -0.76
NEO1-208	ENST00000560328	ADRA2B	P18089	450 aa		10.31	□□□□□ -0.76
NEO1-208	ENST00000560328	LIG4	P49917	911 aa		10.31	□□□□□ -0.76
NEO1-208	ENST00000560328	TRIM28	Q13263	835 aa	Known RBP	10.31	□□□□□ -0.76
NEO1-208	ENST00000560328	DCUN1D2	Q6PH85	259 aa		10.31	□□□□□ -0.76
NEO1-208	ENST00000560328	GRAMD1C	Q8IYS0	662 aa		10.31	□□□□□ -0.76
NEO1-208	ENST00000560328	RTKN2	Q8IZC4	609 aa		10.31	□□□□□ -0.76
NEO1-208	ENST00000560328	OTUD6B	Q8N6M0	293 aa		10.31	□□□□□ -0.76
NEO1-208	ENST00000560328	SREK1	Q8WXA9	508 aa	Known RBP	10.31	□□□□□ -0.76
NEO1-208	ENST00000560328	MYO1A	Q9UBC5	1043 aa		10.31	□□□□□ -0.76
NEO1-208	ENST00000560328	NEDD4	P46934	1319 aa		10.31	□□□□□ -0.76
NEO1-208	ENST00000560328	FAM170A	A1A519	330 aa		10.31	□□□□□ -0.76
NEO1-208	ENST00000560328	U2AF2	P26368	475 aa	Known RBP eCLIP	10.31	□□□□□ -0.76
NEO1-208	ENST00000560328	CDC25A	P30304	524 aa		10.31	□□□□□ -0.76
NEO1-208	ENST00000560328	STAT2	P52630	851 aa		10.31	□□□□□ -0.76
NEO1-208	ENST00000560328	RPS6KA1	Q15418	735 aa		10.31	□□□□□ -0.76
NEO1-208	ENST00000560328	ELF2	Q15723	593 aa		10.31	□□□□□ -0.76
NEO1-208	ENST00000560328	PEX26	Q7Z412	305 aa		10.31	□□□□□ -0.76
NEO1-208	ENST00000560328	SYCE1	Q8N0S2	351 aa		10.31	□□□□□ -0.76
NEO1-208	ENST00000560328	ZNF577	Q9BSK1	485 aa		10.31	□□□□□ -0.76
NEO1-208	ENST00000560328	CD209	Q9NNX6	404 aa		10.31	□□□□□ -0.76
NEO1-208	ENST00000560328	UST	Q9Y2C2	406 aa		10.31	□□□□□ -0.76
NEO1-208	ENST00000560328	CPS1	P31327	1500 aa		10.31	□□□□□ -0.76
NEO1-208	ENST00000560328		A0A087WWV3	80 aa		10.31	□□□□□ -0.76
NEO1-208	ENST00000560328	PRPF6	O94906	941 aa	Known RBP	10.31	□□□□□ -0.76
NEO1-208	ENST00000560328	SLFN14	P0C7P3	912 aa		10.31	□□□□□ -0.76
NEO1-208	ENST00000560328	GCFC2	P16383	781 aa	Known RBP	10.31	□□□□□ -0.76
NEO1-208	ENST00000560328	USP14	P54578	494 aa		10.31	□□□□□ -0.76
NEO1-208	ENST00000560328	SYDE2	Q5VT97	1194 aa		10.31	□□□□□ -0.76
NEO1-208	ENST00000560328	U2AF1L4	Q8WU68	220 aa	Known RBP	10.31	□□□□□ -0.76
NEO1-208	ENST00000560328	TTC14	Q96N46	770 aa		10.31	□□□□□ -0.76
NEO1-208	ENST00000560328	SLC5A4	Q9NY91	659 aa		10.31	□□□□□ -0.76
NEO1-208	ENST00000560328	UTP11	Q9Y3A2	253 aa	Known RBP	10.31	□□□□□ -0.76
NEO1-208	ENST00000560328	DALRD3	Q5D0E6	543 aa	Known RBP	10.3	□□□□□ -0.76
NEO1-208	ENST00000560328	GBP6	Q6ZN66	633 aa		10.3	□□□□□ -0.76
NEO1-208	ENST00000560328	C11orf57	Q6ZUT1	292 aa	Predicted RBP	10.3	□□□□□ -0.76
NEO1-208	ENST00000560328	FOXP4	Q8IVH2	680 aa	Predicted RBP	10.3	□□□□□ -0.76
NEO1-208	ENST00000560328	SMYD4	Q8IYR2	804 aa	Predicted RBP	10.3	□□□□□ -0.76
NEO1-208	ENST00000560328	TDRD7	Q8NHU6	1098 aa	Known RBP	10.3	□□□□□ -0.76
NEO1-208	ENST00000560328	RSPH14	Q9UHP6	348 aa		10.3	□□□□□ -0.76
NEO1-208	ENST00000560328	ACTN4	O43707	911 aa	Known RBP	10.3	□□□□□ -0.76
NEO1-208	ENST00000560328	ZEB2	O60315	1214 aa		10.3	□□□□□ -0.76
NEO1-208	ENST00000560328	ERCC5	P28715	1186 aa	Predicted RBP	10.3	□□□□□ -0.76
NEO1-208	ENST00000560328	CYB5R4	Q7L1T6	521 aa		10.3	□□□□□ -0.76
NEO1-208	ENST00000560328	GJD4	Q96KN9	370 aa	Predicted RBP	10.3	□□□□□ -0.76
NEO1-208	ENST00000560328	SUGCT	Q9HAC7	445 aa		10.3	□□□□□ -0.76
NEO1-208	ENST00000560328	SRPRB	Q9Y5M8	271 aa	Known RBP	10.3	□□□□□ -0.76
NEO1-208	ENST00000560328	ADAMTS13	Q76LX8	1427 aa		10.3	□□□□□ -0.76
NEO1-208	ENST00000560328	COPB1	P53618	953 aa	Known RBP	10.3	□□□□□ -0.76
NEO1-208	ENST00000560328	ODR4	Q5SWX8	454 aa		10.3	□□□□□ -0.76
NEO1-208	ENST00000560328	KLHL7	Q8IXQ5	586 aa		10.3	□□□□□ -0.76
NEO1-208	ENST00000560328	MYRIP	Q8NFW9	859 aa		10.3	□□□□□ -0.76
NEO1-208	ENST00000560328	CCDC94	Q9BW85	323 aa	Predicted RBP	10.3	□□□□□ -0.76
NEO1-208	ENST00000560328	TRIM31	Q9BZY9	425 aa		10.3	□□□□□ -0.76
NEO1-208	ENST00000560328	TSKS	Q9UJT2	592 aa		10.3	□□□□□ -0.76
NEO1-208	ENST00000560328	CACNB3	P54284	484 aa		10.3	□□□□□ -0.76
NEO1-208	ENST00000560328	SNX16	P57768	344 aa		10.3	□□□□□ -0.76
NEO1-208	ENST00000560328	POLR2F	P61218	127 aa	Known RBP	10.3	□□□□□ -0.76
NEO1-208	ENST00000560328	CFAP221	Q4G0U5	840 aa		10.3	□□□□□ -0.76
NEO1-208	ENST00000560328	ZNF365	Q70YC5	407 aa		10.3	□□□□□ -0.76
NEO1-208	ENST00000560328	ZBTB8OS	Q8IWT0	167 aa		10.3	□□□□□ -0.76
NEO1-208	ENST00000560328	IFT20	Q8IY31	132 aa		10.3	□□□□□ -0.76
NEO1-208	ENST00000560328	ARFGAP2	Q8N6H7	521 aa		10.3	□□□□□ -0.76
NEO1-208	ENST00000560328	CCDC63	Q8NA47	563 aa		10.3	□□□□□ -0.76
NEO1-208	ENST00000560328	GJA10	Q969M2	543 aa		10.3	□□□□□ -0.76
NEO1-208	ENST00000560328	METTL14	Q9HCE5	456 aa	Known RBP	10.3	□□□□□ -0.76
NEO1-208	ENST00000560328	PABPN1L	A6NDY0	278 aa	Known RBP	10.3	□□□□□ -0.76
NEO1-208	ENST00000560328		M0QZ92	97 aa		10.3	□□□□□ -0.76
NEO1-208	ENST00000560328	DMP1	Q13316	513 aa	Predicted RBP	10.3	□□□□□ -0.76
NEO1-208	ENST00000560328	UBE2S	Q16763	222 aa		10.3	□□□□□ -0.76
NEO1-208	ENST00000560328	RABL6	Q3YEC7	729 aa	Predicted RBP	10.3	□□□□□ -0.76
NEO1-208	ENST00000560328	SUPT20HL1	Q3ZLR7	823 aa		10.3	□□□□□ -0.76
NEO1-208	ENST00000560328	ATG9A	Q7Z3C6	839 aa		10.3	□□□□□ -0.76
NEO1-208	ENST00000560328	KCNK9	Q9NPC2	374 aa		10.3	□□□□□ -0.76
NEO1-208	ENST00000560328	GJB4	Q9NTQ9	266 aa		10.3	□□□□□ -0.76
NEO1-208	ENST00000560328	PPP2R2C	Q9Y2T4	447 aa		10.3	□□□□□ -0.76
NEO1-208	ENST00000560328	PIK3C2B	O00750	1634 aa		10.3	□□□□□ -0.76
NEO1-208	ENST00000560328	CIAPIN1	Q6FI81	312 aa		10.29	□□□□□ -0.76
NEO1-208	ENST00000560328	ARMCX5	Q6P1M9	558 aa		10.29	□□□□□ -0.76
NEO1-208	ENST00000560328	GPR161	Q8N6U8	529 aa	Known RBP	10.29	□□□□□ -0.76
NEO1-208	ENST00000560328	RNF34	Q969K3	372 aa		10.29	□□□□□ -0.76
NEO1-208	ENST00000560328	ABCC12	Q96J65	1359 aa		10.29	□□□□□ -0.76
NEO1-208	ENST00000560328	CNOT6L	Q96LI5	555 aa	Known RBP	10.29	□□□□□ -0.76
NEO1-208	ENST00000560328	TXNDC16	Q9P2K2	825 aa		10.29	□□□□□ -0.76
NEO1-208	ENST00000560328	PNMA6F	A0A0J9YX94	578 aa		10.29	□□□□□ -0.76
NEO1-208	ENST00000560328	POLG	P54098	1239 aa	Predicted RBP	10.29	□□□□□ -0.76
NEO1-208	ENST00000560328	OGFR	Q9NZT2	677 aa		10.29	□□□□□ -0.76
NEO1-208	ENST00000560328		H0YCG3	227 aa		10.29	□□□□□ -0.76
NEO1-208	ENST00000560328	CRK	P46108	304 aa		10.29	□□□□□ -0.76
NEO1-208	ENST00000560328	CDC37	Q16543	378 aa	Predicted RBP	10.29	□□□□□ -0.76

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