RNA–Protein interactions for RNA: ENST00000559934.5

PSMA4-215, Transcript of proteasome subunit alpha 4, humanhuman

TSL 1 (best)

Gene PSMA4, Length 2,741 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSMA4-215ENST00000559934 FNBP4Q8N3X1 1017 aaPredicted RBP24.38■■□□□ 1.49
PSMA4-215ENST00000559934 PRDM11Q9NQV5 511 aa24.38■■□□□ 1.49
PSMA4-215ENST00000559934 SHANK3Q9BYB0 1731 aa24.38■■□□□ 1.49
PSMA4-215ENST00000559934 GOLGA8KD6RF30 607 aa24.38■■□□□ 1.49
PSMA4-215ENST00000559934 MCTP2Q6DN12 878 aa24.38■■□□□ 1.49
PSMA4-215ENST00000559934 TNKS1BP1Q9C0C2 1729 aaKnown RBP24.37■■□□□ 1.49
PSMA4-215ENST00000559934 PDCLQ13371 301 aa24.37■■□□□ 1.49
PSMA4-215ENST00000559934 CNOT6LQ96LI5 555 aaKnown RBP24.37■■□□□ 1.49
PSMA4-215ENST00000559934 KCNV1Q6PIU1 500 aa24.37■■□□□ 1.49
PSMA4-215ENST00000559934 SH2D3CQ8N5H7 860 aa24.37■■□□□ 1.49
PSMA4-215ENST00000559934 GIMAP8Q8ND71 665 aaPredicted RBP24.37■■□□□ 1.49
PSMA4-215ENST00000559934 CCDC42Q96M95 316 aa24.37■■□□□ 1.49
PSMA4-215ENST00000559934 GEMIN8Q9NWZ8 242 aaKnown RBP24.37■■□□□ 1.49
PSMA4-215ENST00000559934 ZBTB1Q9Y2K1 713 aa24.37■■□□□ 1.49
PSMA4-215ENST00000559934 ANKRD36CQ5JPF3 1778 aa24.37■■□□□ 1.49
PSMA4-215ENST00000559934 ARL6IP4Q66PJ3 421 aaKnown RBP24.36■■□□□ 1.49
PSMA4-215ENST00000559934 TYW1BQ6NUM6 668 aa24.36■■□□□ 1.49
PSMA4-215ENST00000559934 NCK2O43639 380 aa24.36■■□□□ 1.49
PSMA4-215ENST00000559934 CALM1P0DP23 149 aa24.36■■□□□ 1.49
PSMA4-215ENST00000559934 CALM2P0DP24 149 aa24.36■■□□□ 1.49
PSMA4-215ENST00000559934 CALM3P0DP25 149 aa24.36■■□□□ 1.49
PSMA4-215ENST00000559934 MTIF2P46199 727 aaKnown RBP24.36■■□□□ 1.49
PSMA4-215ENST00000559934 KCNB1Q14721 858 aa24.36■■□□□ 1.49
PSMA4-215ENST00000559934 SPA17Q15506 151 aa24.36■■□□□ 1.49
PSMA4-215ENST00000559934 GBP6Q6ZN66 633 aa24.36■■□□□ 1.49
PSMA4-215ENST00000559934 GPKOWQ92917 476 aaPredicted RBP eCLIP24.36■■□□□ 1.493e-6■□□□□ 9.4
PSMA4-215ENST00000559934 OSBPL9Q96SU4 736 aa24.36■■□□□ 1.49
PSMA4-215ENST00000559934 NUP58Q9BVL2 599 aa24.36■■□□□ 1.49
PSMA4-215ENST00000559934 TMEM60Q9H2L4 133 aa24.36■■□□□ 1.49
PSMA4-215ENST00000559934 NUP98P52948 1817 aa24.36■■□□□ 1.49
PSMA4-215ENST00000559934 LOC102724159A0A0B4J2E5 919 aa24.35■■□□□ 1.49
PSMA4-215ENST00000559934 RHOBTB3O94955 611 aa24.35■■□□□ 1.49
PSMA4-215ENST00000559934 HNRNPH1P31943 449 aaKnown RBP24.35■■□□□ 1.49
PSMA4-215ENST00000559934 PWP2Q15269 919 aaKnown RBP24.35■■□□□ 1.49
PSMA4-215ENST00000559934 MIIPQ5JXC2 388 aa24.35■■□□□ 1.49
PSMA4-215ENST00000559934 HAUS3Q68CZ6 603 aa24.35■■□□□ 1.49
PSMA4-215ENST00000559934 ANKRD40Q6AI12 368 aa24.35■■□□□ 1.49
PSMA4-215ENST00000559934 TRIM58Q8NG06 486 aa24.35■■□□□ 1.49
PSMA4-215ENST00000559934 IFIH1Q9BYX4 1025 aaKnown RBP24.35■■□□□ 1.49
PSMA4-215ENST00000559934 SH2D4AQ9H788 454 aa24.35■■□□□ 1.49
PSMA4-215ENST00000559934 TACC1O75410 805 aa24.35■■□□□ 1.49
PSMA4-215ENST00000559934 DDAH1O94760 285 aa24.35■■□□□ 1.49
PSMA4-215ENST00000559934 INPP5BP32019 993 aa24.35■■□□□ 1.49
PSMA4-215ENST00000559934 ATP1A2P50993 1020 aa24.35■■□□□ 1.49
PSMA4-215ENST00000559934 FAM47AQ5JRC9 791 aa24.35■■□□□ 1.49
PSMA4-215ENST00000559934 KCTD16Q68DU8 428 aa24.35■■□□□ 1.49
PSMA4-215ENST00000559934 PFKFB3Q16875 520 aaPredicted RBP24.34■■□□□ 1.49
PSMA4-215ENST00000559934 NCAPGQ9BPX3 1015 aa24.34■■□□□ 1.49
PSMA4-215ENST00000559934 RIOK1Q9BRS2 568 aaKnown RBP24.34■■□□□ 1.49
PSMA4-215ENST00000559934 NOC4LQ9BVI4 516 aaKnown RBP24.34■■□□□ 1.49
PSMA4-215ENST00000559934 SLIT2O94813 1529 aa24.34■■□□□ 1.49
PSMA4-215ENST00000559934 OPA1O60313 960 aa24.34■■□□□ 1.49
PSMA4-215ENST00000559934 TSGA10Q9BZW7 698 aa24.34■■□□□ 1.49
PSMA4-215ENST00000559934 ARHGAP20Q9P2F6 1191 aa24.34■■□□□ 1.49
PSMA4-215ENST00000559934 PCDHA13Q9Y5I0 950 aa24.34■■□□□ 1.49
PSMA4-215ENST00000559934 CICQ96RK0 1608 aaPredicted RBP24.34■■□□□ 1.49
PSMA4-215ENST00000559934 EPHB6O15197 1021 aa24.34■■□□□ 1.49
PSMA4-215ENST00000559934 EPHB4P54760 987 aa24.34■■□□□ 1.49
PSMA4-215ENST00000559934 RETREG2Q8NC44 543 aa24.34■■□□□ 1.49
PSMA4-215ENST00000559934 SLC4A9Q96Q91 983 aa24.34■■□□□ 1.49
PSMA4-215ENST00000559934 DTHD1Q6ZMT9 781 aa24.33■■□□□ 1.49
PSMA4-215ENST00000559934 ZNF572Q7Z3I7 529 aaPredicted RBP24.33■■□□□ 1.49
PSMA4-215ENST00000559934 C2CD5Q86YS7 1000 aa24.33■■□□□ 1.49
PSMA4-215ENST00000559934 RUFY1Q96T51 708 aa24.33■■□□□ 1.49
PSMA4-215ENST00000559934 STIM2Q9P246 746 aa24.33■■□□□ 1.49
PSMA4-215ENST00000559934 BLIDQ8IZY5 108 aa24.33■■□□□ 1.48
PSMA4-215ENST00000559934 ANKRD13CQ8N6S4 541 aa24.33■■□□□ 1.48
PSMA4-215ENST00000559934 GPATCH11Q8N954 259 aa24.33■■□□□ 1.48
PSMA4-215ENST00000559934 P2RX5Q93086 422 aa24.33■■□□□ 1.48
PSMA4-215ENST00000559934 ZIM3Q96PE6 472 aa24.33■■□□□ 1.48
PSMA4-215ENST00000559934 KBTBD4Q9NVX7 518 aa24.33■■□□□ 1.48
PSMA4-215ENST00000559934 KAT6BQ8WYB5 2073 aa24.32■■□□□ 1.48
PSMA4-215ENST00000559934 WTIPA6NIX2 430 aaPredicted RBP24.32■■□□□ 1.48
PSMA4-215ENST00000559934 HSF2BPO75031 334 aa24.32■■□□□ 1.48
PSMA4-215ENST00000559934 KRT14P02533 472 aa24.32■■□□□ 1.48
PSMA4-215ENST00000559934 UBA7P41226 1012 aa24.32■■□□□ 1.48
PSMA4-215ENST00000559934 CCDC178Q5BJE1 867 aa24.32■■□□□ 1.48
PSMA4-215ENST00000559934 SALL4Q9UJQ4 1053 aa24.32■■□□□ 1.48
PSMA4-215ENST00000559934 NDUFAB1O14561 156 aa24.32■■□□□ 1.48
PSMA4-215ENST00000559934 USO1O60763 962 aaKnown RBP24.32■■□□□ 1.48
PSMA4-215ENST00000559934 FCER1AP12319 257 aa24.32■■□□□ 1.48
PSMA4-215ENST00000559934 STK4Q13043 487 aa24.32■■□□□ 1.48
PSMA4-215ENST00000559934 CCDC181Q5TID7 509 aa24.32■■□□□ 1.48
PSMA4-215ENST00000559934 NOC3LQ8WTT2 800 aaKnown RBP24.32■■□□□ 1.48
PSMA4-215ENST00000559934 HPS3Q969F9 1004 aa24.32■■□□□ 1.48
PSMA4-215ENST00000559934 RBM12Q9NTZ6 932 aaKnown RBP24.32■■□□□ 1.48
PSMA4-215ENST00000559934 DLEC1Q9Y238 1755 aa24.32■■□□□ 1.48
PSMA4-215ENST00000559934 EIF4A3P38919 411 aaKnown RBP24.31■■□□□ 1.48
PSMA4-215ENST00000559934 KIF11P52732 1056 aa24.31■■□□□ 1.48
PSMA4-215ENST00000559934 SKOR1P84550 965 aa24.31■■□□□ 1.48
PSMA4-215ENST00000559934 DHTKD1Q96HY7 919 aaPredicted RBP24.31■■□□□ 1.48
PSMA4-215ENST00000559934 USP17L12C9JPN9 530 aa24.31■■□□□ 1.48
PSMA4-215ENST00000559934 USP17L21D6R901 530 aa24.31■■□□□ 1.48
PSMA4-215ENST00000559934 EPB41P11171 864 aaKnown RBP24.31■■□□□ 1.48
PSMA4-215ENST00000559934 CYP19A1P11511 503 aaPredicted RBP24.31■■□□□ 1.48
PSMA4-215ENST00000559934 CCNE1P24864 410 aa24.31■■□□□ 1.48
PSMA4-215ENST00000559934 MNAT1P51948 309 aa24.31■■□□□ 1.48
PSMA4-215ENST00000559934 ITIH3Q06033 890 aa24.31■■□□□ 1.48
PSMA4-215ENST00000559934 SWT1Q5T5J6 900 aaKnown RBP24.31■■□□□ 1.48
PSMA4-215ENST00000559934 MS4A14Q96JA4 679 aa24.31■■□□□ 1.48
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms