RNA–Protein interactions for RNA: ENST00000559728.1

HMG20A-209, Transcript of high mobility group 20A, humanhuman

TSL 2

Gene HMG20A, Length 981 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMG20A-209ENST00000559728 CNTNAP5Q8WYK1 1306 aa10.52□□□□□ -0.73
HMG20A-209ENST00000559728 PARP14Q460N5 1801 aa10.51□□□□□ -0.73
HMG20A-209ENST00000559728 hCG_1642624A0A1W2PR95 340 aa10.51□□□□□ -0.73
HMG20A-209ENST00000559728 OPLAHO14841 1288 aa10.51□□□□□ -0.73
HMG20A-209ENST00000559728 ZBED4O75132 1171 aa10.51□□□□□ -0.73
HMG20A-209ENST00000559728 ICAM1P05362 532 aa10.51□□□□□ -0.73
HMG20A-209ENST00000559728 FDX1P10109 184 aa10.51□□□□□ -0.73
HMG20A-209ENST00000559728 ERCC3P19447 782 aa10.51□□□□□ -0.73
HMG20A-209ENST00000559728 KIF5BP33176 963 aa10.51□□□□□ -0.73
HMG20A-209ENST00000559728 METAP2P50579 478 aaKnown RBP eCLIP10.51□□□□□ -0.73
HMG20A-209ENST00000559728 CCT2P78371 535 aaKnown RBP10.51□□□□□ -0.73
HMG20A-209ENST00000559728 FGD1P98174 961 aa10.51□□□□□ -0.73
HMG20A-209ENST00000559728 IKQ13123 557 aaPredicted RBP10.51□□□□□ -0.73
HMG20A-209ENST00000559728 PKN1Q16512 942 aa10.51□□□□□ -0.73
HMG20A-209ENST00000559728 CDC37Q16543 378 aaPredicted RBP10.51□□□□□ -0.73
HMG20A-209ENST00000559728 MUM1L1Q5H9M0 696 aa10.51□□□□□ -0.73
HMG20A-209ENST00000559728 CCDC174Q6PII3 467 aa10.51□□□□□ -0.73
HMG20A-209ENST00000559728 CPXCR1Q8N123 301 aa10.51□□□□□ -0.73
HMG20A-209ENST00000559728 SHCBP1Q8NEM2 672 aa10.51□□□□□ -0.73
HMG20A-209ENST00000559728 CLEC4DQ8WXI8 215 aa10.51□□□□□ -0.73
HMG20A-209ENST00000559728 USP6NLQ92738 828 aa10.51□□□□□ -0.73
HMG20A-209ENST00000559728 TEX13BQ9BXU2 312 aa10.51□□□□□ -0.73
HMG20A-209ENST00000559728 VAT1LQ9HCJ6 419 aa10.51□□□□□ -0.73
HMG20A-209ENST00000559728 ISY1Q9ULR0 285 aaKnown RBP10.51□□□□□ -0.73
HMG20A-209ENST00000559728 ZBTB5O15062 677 aa10.5□□□□□ -0.73
HMG20A-209ENST00000559728 PPFIA3O75145 1194 aa10.5□□□□□ -0.73
HMG20A-209ENST00000559728 IGHA2P01877 340 aa10.5□□□□□ -0.73
HMG20A-209ENST00000559728 IFNAR1P17181 557 aa10.5□□□□□ -0.73
HMG20A-209ENST00000559728 PSMC4P43686 418 aa10.5□□□□□ -0.73
HMG20A-209ENST00000559728 GNAQP50148 359 aa10.5□□□□□ -0.73
HMG20A-209ENST00000559728 STK3Q13188 491 aa10.5□□□□□ -0.73
HMG20A-209ENST00000559728 ANKRD1Q15327 319 aa10.5□□□□□ -0.73
HMG20A-209ENST00000559728 MORN1Q5T089 497 aa10.5□□□□□ -0.73
HMG20A-209ENST00000559728 SNRNP48Q6IEG0 339 aaKnown RBP10.5□□□□□ -0.73
HMG20A-209ENST00000559728 TYW1BQ6NUM6 668 aa10.5□□□□□ -0.73
HMG20A-209ENST00000559728 SYNE3Q6ZMZ3 975 aa10.5□□□□□ -0.73
HMG20A-209ENST00000559728 NOL8Q76FK4 1167 aaKnown RBP10.5□□□□□ -0.73
HMG20A-209ENST00000559728 GPR142Q7Z601 462 aa10.5□□□□□ -0.73
HMG20A-209ENST00000559728 CCDC82Q8N4S0 544 aa10.5□□□□□ -0.73
HMG20A-209ENST00000559728 NECAB1Q8N987 351 aa10.5□□□□□ -0.73
HMG20A-209ENST00000559728 GTF3C6Q969F1 213 aa10.5□□□□□ -0.73
HMG20A-209ENST00000559728 LZTS2Q9BRK4 669 aa10.5□□□□□ -0.73
HMG20A-209ENST00000559728 RBM28Q9NW13 759 aaKnown RBP10.5□□□□□ -0.73
HMG20A-209ENST00000559728 GABRQQ9UN88 632 aa10.5□□□□□ -0.73
HMG20A-209ENST00000559728 PNMA6FA0A0J9YX94 578 aa10.49□□□□□ -0.73
HMG20A-209ENST00000559728 NFIBO00712 420 aa10.49□□□□□ -0.73
HMG20A-209ENST00000559728 FDPSP14324 419 aaKnown RBP10.49□□□□□ -0.73
HMG20A-209ENST00000559728 PTPREP23469 700 aa10.49□□□□□ -0.73
HMG20A-209ENST00000559728 MAPK4P31152 587 aa10.49□□□□□ -0.73
HMG20A-209ENST00000559728 PLCB2Q00722 1185 aa10.49□□□□□ -0.73
HMG20A-209ENST00000559728 PLS1Q14651 629 aa10.49□□□□□ -0.73
HMG20A-209ENST00000559728 PPP2R5BQ15173 497 aa10.49□□□□□ -0.73
HMG20A-209ENST00000559728 OTOP1Q7RTM1 612 aa10.49□□□□□ -0.73
HMG20A-209ENST00000559728 TBC1D5Q92609 795 aa10.49□□□□□ -0.73
HMG20A-209ENST00000559728 PHKBQ93100 1093 aa10.49□□□□□ -0.73
HMG20A-209ENST00000559728 FGD4Q96M96 766 aa10.49□□□□□ -0.73
HMG20A-209ENST00000559728 PRDM10Q9NQV6 1147 aa10.49□□□□□ -0.73
HMG20A-209ENST00000559728 CCPG1Q9ULG6 757 aa10.49□□□□□ -0.73
HMG20A-209ENST00000559728 LIMCH1Q9UPQ0 1083 aa10.49□□□□□ -0.73
HMG20A-209ENST00000559728 ZSWIM8A7E2V4 1837 aa10.49□□□□□ -0.73
HMG20A-209ENST00000559728 DNAJC25-GNG10A0A024R161 153 aa10.48□□□□□ -0.73
HMG20A-209ENST00000559728 ADAMTS3O15072 1205 aa10.48□□□□□ -0.73
HMG20A-209ENST00000559728 PRPF3O43395 683 aaKnown RBP10.48□□□□□ -0.73
HMG20A-209ENST00000559728 COBLO75128 1261 aa10.48□□□□□ -0.73
HMG20A-209ENST00000559728 SLC25A27O95847 323 aa10.48□□□□□ -0.73
HMG20A-209ENST00000559728 FCGRTP55899 365 aa10.48□□□□□ -0.73
HMG20A-209ENST00000559728 GHRHRQ02643 423 aa10.48□□□□□ -0.73
HMG20A-209ENST00000559728 PRKCZQ05513 592 aa10.48□□□□□ -0.73
HMG20A-209ENST00000559728 GRB14Q14449 540 aa10.48□□□□□ -0.73
HMG20A-209ENST00000559728 WWC2Q6AWC2 1192 aa10.48□□□□□ -0.73
HMG20A-209ENST00000559728 PLEKHH3Q7Z736 793 aa10.48□□□□□ -0.73
HMG20A-209ENST00000559728 NCAPG2Q86XI2 1143 aa10.48□□□□□ -0.73
HMG20A-209ENST00000559728 FBXO11Q86XK2 927 aa10.48□□□□□ -0.73
HMG20A-209ENST00000559728 HOMER1Q86YM7 354 aa10.48□□□□□ -0.73
HMG20A-209ENST00000559728 NSUN7Q8NE18 718 aaKnown RBP10.48□□□□□ -0.73
HMG20A-209ENST00000559728 PIBF1Q8WXW3 757 aa10.48□□□□□ -0.73
HMG20A-209ENST00000559728 COA7Q96BR5 231 aa10.48□□□□□ -0.73
HMG20A-209ENST00000559728 ERO1AQ96HE7 468 aa10.48□□□□□ -0.73
HMG20A-209ENST00000559728 TRERF1Q96PN7 1200 aa10.48□□□□□ -0.73
HMG20A-209ENST00000559728 SLKQ9H2G2 1235 aaPredicted RBP10.48□□□□□ -0.73
HMG20A-209ENST00000559728 MROH8Q9H579 483 aa10.48□□□□□ -0.73
HMG20A-209ENST00000559728 A1CFQ9NQ94 594 aaKnown RBP10.48□□□□□ -0.73
HMG20A-209ENST00000559728 RNF146Q9NTX7 359 aa10.48□□□□□ -0.73
HMG20A-209ENST00000559728 NAP1L2Q9ULW6 460 aaPredicted RBP10.48□□□□□ -0.73
HMG20A-209ENST00000559728 V9GY48 417 aaPredicted RBP10.48□□□□□ -0.73
HMG20A-209ENST00000559728 ASTN1O14525 1302 aa10.48□□□□□ -0.73
HMG20A-209ENST00000559728 TNPO2O14787 897 aaKnown RBP10.47□□□□□ -0.73
HMG20A-209ENST00000559728 JAK2O60674 1132 aa10.47□□□□□ -0.73
HMG20A-209ENST00000559728 FMNL1O95466 1100 aaPredicted RBP10.47□□□□□ -0.73
HMG20A-209ENST00000559728 ALAS1P13196 640 aa10.47□□□□□ -0.73
HMG20A-209ENST00000559728 CCNA1P78396 465 aa10.47□□□□□ -0.73
HMG20A-209ENST00000559728 TKFCQ3LXA3 575 aa10.47□□□□□ -0.73
HMG20A-209ENST00000559728 USH1GQ495M9 461 aa10.47□□□□□ -0.73
HMG20A-209ENST00000559728 ABRAQ8N0Z2 381 aa10.47□□□□□ -0.73
HMG20A-209ENST00000559728 CHST13Q8NET6 341 aa10.47□□□□□ -0.73
HMG20A-209ENST00000559728 IL27Q8NEV9 243 aa10.47□□□□□ -0.73
HMG20A-209ENST00000559728 SMARCC2Q8TAQ2 1214 aa10.47□□□□□ -0.73
HMG20A-209ENST00000559728 NPLOC4Q8TAT6 608 aa10.47□□□□□ -0.73
HMG20A-209ENST00000559728 RRP36Q96EU6 259 aaKnown RBP10.47□□□□□ -0.73
HMG20A-209ENST00000559728 TMX3Q96JJ7 454 aa10.47□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms