RNA–Protein interactions for RNA: ENST00000559433.5

LRRC28-214, Transcript of leucine rich repeat containing 28, humanhuman

TSL 5

Gene LRRC28, Length 1,045 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28-214ENST00000559433 PNMA2Q9UL42 364 aa14.72□□□□□ -0.05
LRRC28-214ENST00000559433 FAM184BQ9ULE4 1060 aa14.72□□□□□ -0.05
LRRC28-214ENST00000559433 ZMYND8Q9ULU4 1186 aaPredicted RBP14.72□□□□□ -0.05
LRRC28-214ENST00000559433 WDR19Q8NEZ3 1342 aa14.71□□□□□ -0.05
LRRC28-214ENST00000559433 ERICH2A1L162 156 aa14.71□□□□□ -0.05
LRRC28-214ENST00000559433 SOWAHBA6NEL2 793 aa14.71□□□□□ -0.05
LRRC28-214ENST00000559433 IFIT3O14879 490 aaKnown RBP14.71□□□□□ -0.05
LRRC28-214ENST00000559433 ATN1P54259 1190 aaPredicted RBP14.71□□□□□ -0.05
LRRC28-214ENST00000559433 LRRC41Q15345 812 aa14.71□□□□□ -0.05
LRRC28-214ENST00000559433 LRRC26Q2I0M4 334 aa14.71□□□□□ -0.05
LRRC28-214ENST00000559433 CCDC144CPQ8IYA2 1237 aa14.71□□□□□ -0.05
LRRC28-214ENST00000559433 LENG1Q96BZ8 264 aaPredicted RBP14.71□□□□□ -0.05
LRRC28-214ENST00000559433 LSG1Q9H089 658 aaKnown RBP14.71□□□□□ -0.05
LRRC28-214ENST00000559433 ANO2Q9NQ90 1003 aa14.71□□□□□ -0.05
LRRC28-214ENST00000559433 PRKAG2Q9UGJ0 569 aa14.71□□□□□ -0.05
LRRC28-214ENST00000559433 PTPDC1A2A3K4 754 aa14.7□□□□□ -0.06
LRRC28-214ENST00000559433 ASB14A6NK59 587 aa14.7□□□□□ -0.06
LRRC28-214ENST00000559433 NFIBO00712 420 aa14.7□□□□□ -0.06
LRRC28-214ENST00000559433 DHX16O60231 1041 aaKnown RBP14.7□□□□□ -0.06
LRRC28-214ENST00000559433 SLC34A2O95436 690 aa14.7□□□□□ -0.06
LRRC28-214ENST00000559433 PGK1P00558 417 aa14.7□□□□□ -0.06
LRRC28-214ENST00000559433 ACVR2BQ13705 512 aa14.7□□□□□ -0.06
LRRC28-214ENST00000559433 WTAPQ15007 396 aa14.7□□□□□ -0.06
LRRC28-214ENST00000559433 SART3Q15020 963 aaKnown RBP14.7□□□□□ -0.06
LRRC28-214ENST00000559433 CDC37Q16543 378 aaPredicted RBP14.7□□□□□ -0.06
LRRC28-214ENST00000559433 USH1GQ495M9 461 aa14.7□□□□□ -0.06
LRRC28-214ENST00000559433 CASC1Q6TDU7 716 aa14.7□□□□□ -0.06
LRRC28-214ENST00000559433 CHST3Q7LGC8 479 aa14.7□□□□□ -0.06
LRRC28-214ENST00000559433 ADGRF4Q8IZF3 695 aa14.7□□□□□ -0.06
LRRC28-214ENST00000559433 ABHD16BQ9H3Z7 469 aa14.7□□□□□ -0.06
LRRC28-214ENST00000559433 SPC25Q9HBM1 224 aa14.7□□□□□ -0.06
LRRC28-214ENST00000559433 RBM27Q9P2N5 1060 aaKnown RBP14.7□□□□□ -0.06
LRRC28-214ENST00000559433 DNAH12Q6ZR08 3092 aa14.69□□□□□ -0.06
LRRC28-214ENST00000559433 SYN1P17600 705 aa14.69□□□□□ -0.06
LRRC28-214ENST00000559433 ADCYAP1R1P41586 468 aa14.69□□□□□ -0.06
LRRC28-214ENST00000559433 BAATQ14032 418 aaPredicted RBP14.69□□□□□ -0.06
LRRC28-214ENST00000559433 CCDC144BQ3MJ40 725 aa14.69□□□□□ -0.06
LRRC28-214ENST00000559433 NOL8Q76FK4 1167 aaKnown RBP14.69□□□□□ -0.06
LRRC28-214ENST00000559433 MB21D2Q8IYB1 491 aaPredicted RBP14.69□□□□□ -0.06
LRRC28-214ENST00000559433 CLEC4DQ8WXI8 215 aa14.69□□□□□ -0.06
LRRC28-214ENST00000559433 ASTN1O14525 1302 aa14.68□□□□□ -0.06
LRRC28-214ENST00000559433 SYNRGQ9UMZ2 1314 aa14.68□□□□□ -0.06
LRRC28-214ENST00000559433 SLC27A2O14975 620 aa14.68□□□□□ -0.06
LRRC28-214ENST00000559433 CDC45O75419 566 aa14.68□□□□□ -0.06
LRRC28-214ENST00000559433 CALML3P27482 149 aa14.68□□□□□ -0.06
LRRC28-214ENST00000559433 TMEM67Q5HYA8 995 aa14.68□□□□□ -0.06
LRRC28-214ENST00000559433 SLC30A10Q6XR72 485 aa14.68□□□□□ -0.06
LRRC28-214ENST00000559433 RNF207Q6ZRF8 634 aa14.68□□□□□ -0.06
LRRC28-214ENST00000559433 STAG2Q8N3U4 1231 aa14.68□□□□□ -0.06
LRRC28-214ENST00000559433 FERMT2Q96AC1 680 aa14.68□□□□□ -0.06
LRRC28-214ENST00000559433 PURBQ96QR8 312 aaKnown RBP14.68□□□□□ -0.06
LRRC28-214ENST00000559433 LBHD1Q9BQE6 289 aaPredicted RBP14.68□□□□□ -0.06
LRRC28-214ENST00000559433 KATNBL1Q9H079 304 aa14.68□□□□□ -0.06
LRRC28-214ENST00000559433 SENP2Q9HC62 589 aa14.68□□□□□ -0.06
LRRC28-214ENST00000559433 VAT1LQ9HCJ6 419 aa14.68□□□□□ -0.06
LRRC28-214ENST00000559433 ADD3Q9UEY8 706 aaKnown RBP14.68□□□□□ -0.06
LRRC28-214ENST00000559433 ATP11BQ9Y2G3 1177 aa14.68□□□□□ -0.06
LRRC28-214ENST00000559433 DDX49Q9Y6V7 483 aaKnown RBP14.68□□□□□ -0.06
LRRC28-214ENST00000559433 ABCB11O95342 1321 aa14.67□□□□□ -0.06
LRRC28-214ENST00000559433 KLRF2D3W0D1 207 aa14.67□□□□□ -0.06
LRRC28-214ENST00000559433 DUSP11O75319 330 aaKnown RBP14.67□□□□□ -0.06
LRRC28-214ENST00000559433 ANTXR2P58335 489 aa14.67□□□□□ -0.06
LRRC28-214ENST00000559433 QRICH1Q2TAL8 776 aa14.67□□□□□ -0.06
LRRC28-214ENST00000559433 CREB3L3Q68CJ9 461 aa14.67□□□□□ -0.06
LRRC28-214ENST00000559433 SLC39A5Q6ZMH5 540 aa14.67□□□□□ -0.06
LRRC28-214ENST00000559433 VTI1AQ96AJ9 217 aa14.67□□□□□ -0.06
LRRC28-214ENST00000559433 MPHOSPH6Q99547 160 aaKnown RBP14.67□□□□□ -0.06
LRRC28-214ENST00000559433 JMJD4Q9H9V9 463 aa14.67□□□□□ -0.06
LRRC28-214ENST00000559433 MAD2L2Q9UI95 211 aa14.67□□□□□ -0.06
LRRC28-214ENST00000559433 PHF24Q9UPV7 400 aa14.67□□□□□ -0.06
LRRC28-214ENST00000559433 TRIOBPQ9H2D6 2365 aa14.67□□□□□ -0.06
LRRC28-214ENST00000559433 BAZ2BQ9UIF8 2168 aaKnown RBP14.66□□□□□ -0.06
LRRC28-214ENST00000559433 ADCY6O43306 1168 aa14.66□□□□□ -0.06
LRRC28-214ENST00000559433 PRC1O43663 620 aa14.66□□□□□ -0.06
LRRC28-214ENST00000559433 ADAMTS4O75173 837 aa14.66□□□□□ -0.06
LRRC28-214ENST00000559433 ALDH5A1P51649 535 aaPredicted RBP14.66□□□□□ -0.06
LRRC28-214ENST00000559433 RTP1P59025 263 aa14.66□□□□□ -0.06
LRRC28-214ENST00000559433 RPS6P62753 249 aaKnown RBP14.66□□□□□ -0.06
LRRC28-214ENST00000559433 GRM4Q14833 912 aa14.66□□□□□ -0.06
LRRC28-214ENST00000559433 NECTIN1Q15223 517 aa14.66□□□□□ -0.06
LRRC28-214ENST00000559433 EEPD1Q7L9B9 569 aa14.66□□□□□ -0.06
LRRC28-214ENST00000559433 CATIPQ7Z7H3 387 aa14.66□□□□□ -0.06
LRRC28-214ENST00000559433 FBXO11Q86XK2 927 aa14.66□□□□□ -0.06
LRRC28-214ENST00000559433 FBXO16Q8IX29 292 aaPredicted RBP14.66□□□□□ -0.06
LRRC28-214ENST00000559433 NUP133Q8WUM0 1156 aa14.66□□□□□ -0.06
LRRC28-214ENST00000559433 UBE2OQ9C0C9 1292 aaKnown RBP14.66□□□□□ -0.06
LRRC28-214ENST00000559433 LTBP2Q14767 1821 aa14.65□□□□□ -0.06
LRRC28-214ENST00000559433 C11orf97A0A1B0GVM6 126 aaPredicted RBP14.65□□□□□ -0.06
LRRC28-214ENST00000559433 A0A1W2PPC1 479 aa14.65□□□□□ -0.06
LRRC28-214ENST00000559433 PALM3A6NDB9 673 aaPredicted RBP14.65□□□□□ -0.06
LRRC28-214ENST00000559433 B4DLN1 442 aa14.65□□□□□ -0.06
LRRC28-214ENST00000559433 C6orf222P0C671 652 aaPredicted RBP14.65□□□□□ -0.06
LRRC28-214ENST00000559433 MCM5P33992 734 aa14.65□□□□□ -0.06
LRRC28-214ENST00000559433 MRPL12P52815 198 aaKnown RBP14.65□□□□□ -0.06
LRRC28-214ENST00000559433 TNFAIP2Q03169 654 aa14.65□□□□□ -0.06
LRRC28-214ENST00000559433 RNF20Q5VTR2 975 aa14.65□□□□□ -0.06
LRRC28-214ENST00000559433 IGDCC4Q8TDY8 1250 aa14.65□□□□□ -0.06
LRRC28-214ENST00000559433 MORC4Q8TE76 937 aa14.65□□□□□ -0.06
LRRC28-214ENST00000559433 TSEN34Q9BSV6 310 aaKnown RBP14.65□□□□□ -0.06
LRRC28-214ENST00000559433 LY9Q9HBG7 655 aa14.65□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 65.4 ms