RNA–Protein interactions for RNA: ENST00000559209.5

RNF111-206, Transcript of ring finger protein 111, humanhuman

TSL 1 (best) BASIC

Gene RNF111, Length 5,278 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF111-206ENST00000559209 CCDC144CPQ8IYA2 1237 aa4.36□□□□□ -1.71
RNF111-206ENST00000559209 TSEN2Q8NCE0 465 aaKnown RBP4.36□□□□□ -1.71
RNF111-206ENST00000559209 ANKK1Q8NFD2 765 aa4.36□□□□□ -1.71
RNF111-206ENST00000559209 CALML4Q96GE6 196 aa4.36□□□□□ -1.71
RNF111-206ENST00000559209 ZNF408Q9H9D4 720 aa4.36□□□□□ -1.71
RNF111-206ENST00000559209 XAB2Q9HCS7 855 aaKnown RBP4.36□□□□□ -1.71
RNF111-206ENST00000559209 ZSCAN32Q9NX65 697 aa4.36□□□□□ -1.71
RNF111-206ENST00000559209 SEPT3Q9UH03 358 aa4.36□□□□□ -1.71
RNF111-206ENST00000559209 MOSPD1Q9UJG1 213 aa4.36□□□□□ -1.71
RNF111-206ENST00000559209 LUC7L2Q9Y383 392 aaKnown RBP4.36□□□□□ -1.71
RNF111-206ENST00000559209 SOWAHDA6NJG2 315 aa4.35□□□□□ -1.71
RNF111-206ENST00000559209 FBLN1P23142 703 aa4.35□□□□□ -1.71
RNF111-206ENST00000559209 ITGA6P23229 1130 aa4.35□□□□□ -1.71
RNF111-206ENST00000559209 COPB2P35606 906 aa4.35□□□□□ -1.71
RNF111-206ENST00000559209 STIM1Q13586 685 aa4.35□□□□□ -1.71
RNF111-206ENST00000559209 ZNF174Q15697 407 aa4.35□□□□□ -1.71
RNF111-206ENST00000559209 NBPF15Q8N660 670 aa4.35□□□□□ -1.71
RNF111-206ENST00000559209 NKX2-3Q8TAU0 364 aa4.35□□□□□ -1.71
RNF111-206ENST00000559209 SYMPKQ92797 1274 aaKnown RBP4.35□□□□□ -1.71
RNF111-206ENST00000559209 TEKT1Q969V4 418 aa4.35□□□□□ -1.71
RNF111-206ENST00000559209 MPP4Q96JB8 637 aa4.35□□□□□ -1.71
RNF111-206ENST00000559209 ADAM33Q9BZ11 813 aa4.35□□□□□ -1.71
RNF111-206ENST00000559209 PRKD2Q9BZL6 878 aa4.35□□□□□ -1.71
RNF111-206ENST00000559209 CNNM2Q9H8M5 875 aa4.35□□□□□ -1.71
RNF111-206ENST00000559209 SEPSECSQ9HD40 501 aaKnown RBP4.35□□□□□ -1.71
RNF111-206ENST00000559209 FAM217BQ9NTX9 383 aaPredicted RBP4.35□□□□□ -1.71
RNF111-206ENST00000559209 ITGB1BP2Q9UKP3 347 aa4.35□□□□□ -1.71
RNF111-206ENST00000559209 DNM3Q9UQ16 869 aa4.35□□□□□ -1.71
RNF111-206ENST00000559209 COL1A1P02452 1464 aaPredicted RBP4.35□□□□□ -1.71
RNF111-206ENST00000559209 H0YC42 278 aa4.35□□□□□ -1.71
RNF111-206ENST00000559209 LZTS3O60299 673 aaPredicted RBP4.35□□□□□ -1.71
RNF111-206ENST00000559209 CIAO1O76071 339 aa4.35□□□□□ -1.71
RNF111-206ENST00000559209 CD53P19397 219 aa4.35□□□□□ -1.71
RNF111-206ENST00000559209 SAT1P21673 171 aa4.35□□□□□ -1.71
RNF111-206ENST00000559209 TM4SF1P30408 202 aa4.35□□□□□ -1.71
RNF111-206ENST00000559209 PPARGP37231 505 aaPredicted RBP4.35□□□□□ -1.71
RNF111-206ENST00000559209 RARSP54136 660 aaKnown RBP4.35□□□□□ -1.71
RNF111-206ENST00000559209 KRT33BQ14525 404 aa4.35□□□□□ -1.71
RNF111-206ENST00000559209 KIF4BQ2VIQ3 1234 aa4.35□□□□□ -1.71
RNF111-206ENST00000559209 BLOC1S2Q6QNY1 142 aa4.35□□□□□ -1.71
RNF111-206ENST00000559209 NLRP10Q86W26 655 aa4.35□□□□□ -1.71
RNF111-206ENST00000559209 ZNF34Q8IZ26 560 aa4.35□□□□□ -1.71
RNF111-206ENST00000559209 SERBP1Q8NC51 408 aaKnown RBP eCLIP4.35□□□□□ -1.71
RNF111-206ENST00000559209 ERO1AQ96HE7 468 aa4.35□□□□□ -1.71
RNF111-206ENST00000559209 MYCBPQ99417 103 aaPredicted RBP4.35□□□□□ -1.71
RNF111-206ENST00000559209 PLA2G12BQ9BX93 195 aa4.35□□□□□ -1.71
RNF111-206ENST00000559209 KIF9Q9HAQ2 790 aa4.35□□□□□ -1.71
RNF111-206ENST00000559209 IKBKGQ9Y6K9 419 aa4.35□□□□□ -1.71
RNF111-206ENST00000559209 KINO60870 393 aaKnown RBP4.35□□□□□ -1.71
RNF111-206ENST00000559209 TMEM127O75204 238 aa4.35□□□□□ -1.71
RNF111-206ENST00000559209 NUDT7P0C024 238 aa4.35□□□□□ -1.71
RNF111-206ENST00000559209 USP8P40818 1118 aa4.35□□□□□ -1.71
RNF111-206ENST00000559209 USP14P54578 494 aa4.35□□□□□ -1.71
RNF111-206ENST00000559209 KRT85P78386 507 aa4.35□□□□□ -1.71
RNF111-206ENST00000559209 CCNA1P78396 465 aa4.35□□□□□ -1.71
RNF111-206ENST00000559209 CWF19L2Q2TBE0 894 aaKnown RBP4.35□□□□□ -1.71
RNF111-206ENST00000559209 C16orf46Q6P387 395 aa4.35□□□□□ -1.71
RNF111-206ENST00000559209 TMTC2Q8N394 836 aa4.35□□□□□ -1.71
RNF111-206ENST00000559209 ENAHQ8N8S7 591 aaPredicted RBP4.35□□□□□ -1.71
RNF111-206ENST00000559209 BICD2Q8TD16 824 aa4.35□□□□□ -1.71
RNF111-206ENST00000559209 TBC1D31Q96DN5 1066 aa4.35□□□□□ -1.71
RNF111-206ENST00000559209 EIF2B3Q9NR50 452 aaKnown RBP4.35□□□□□ -1.71
RNF111-206ENST00000559209 PCDHB15Q9Y5E8 787 aa4.35□□□□□ -1.71
RNF111-206ENST00000559209 ZNF804BA4D1E1 1349 aa4.35□□□□□ -1.71
RNF111-206ENST00000559209 KIF2AO00139 706 aaPredicted RBP4.35□□□□□ -1.71
RNF111-206ENST00000559209 GNAT2P19087 354 aa4.35□□□□□ -1.71
RNF111-206ENST00000559209 INHBEP58166 350 aa4.35□□□□□ -1.71
RNF111-206ENST00000559209 UBXN2AP68543 259 aa4.35□□□□□ -1.71
RNF111-206ENST00000559209 KRT17Q04695 432 aa4.35□□□□□ -1.71
RNF111-206ENST00000559209 CCDC173Q0VFZ6 552 aa4.35□□□□□ -1.71
RNF111-206ENST00000559209 TRIM28Q13263 835 aaKnown RBP4.35□□□□□ -1.71
RNF111-206ENST00000559209 TCEAL1Q15170 157 aa4.35□□□□□ -1.71
RNF111-206ENST00000559209 SF3B3Q15393 1217 aaKnown RBP4.35□□□□□ -1.71
RNF111-206ENST00000559209 UAP1L1Q3KQV9 507 aa4.35□□□□□ -1.71
RNF111-206ENST00000559209 TEX35Q5T0J7 233 aa4.35□□□□□ -1.71
RNF111-206ENST00000559209 C10orf62Q5T681 223 aaPredicted RBP4.35□□□□□ -1.71
RNF111-206ENST00000559209 MUL1Q969V5 352 aa4.35□□□□□ -1.71
RNF111-206ENST00000559209 CDCA7LQ96GN5 454 aa4.35□□□□□ -1.71
RNF111-206ENST00000559209 DEPDC7Q96QD5 511 aa4.35□□□□□ -1.71
RNF111-206ENST00000559209 PLEKHF1Q96S99 279 aa4.35□□□□□ -1.71
RNF111-206ENST00000559209 ABCG4Q9H172 646 aa4.35□□□□□ -1.71
RNF111-206ENST00000559209 FAM204AQ9H8W3 233 aa4.35□□□□□ -1.71
RNF111-206ENST00000559209 ZFYVE28Q9HCC9 887 aa4.35□□□□□ -1.71
RNF111-206ENST00000559209 BMP2KQ9NSY1 1161 aaPredicted RBP4.35□□□□□ -1.71
RNF111-206ENST00000559209 MYOM1P52179 1685 aa4.35□□□□□ -1.71
RNF111-206ENST00000559209 CTAGE5O15320 804 aa4.34□□□□□ -1.71
RNF111-206ENST00000559209 RASGRP1O95267 797 aa4.34□□□□□ -1.71
RNF111-206ENST00000559209 DNM2P50570 870 aa4.34□□□□□ -1.71
RNF111-206ENST00000559209 SKOR1P84550 965 aa4.34□□□□□ -1.71
RNF111-206ENST00000559209 STARD3Q14849 445 aa4.34□□□□□ -1.71
RNF111-206ENST00000559209 ACAP1Q15027 740 aa4.34□□□□□ -1.71
RNF111-206ENST00000559209 SMAD1Q15797 465 aaKnown RBP4.34□□□□□ -1.71
RNF111-206ENST00000559209 LARP7Q4G0J3 582 aaKnown RBP eCLIP4.34□□□□□ -1.71
RNF111-206ENST00000559209 BMP2KLQ5H9B9 411 aa4.34□□□□□ -1.71
RNF111-206ENST00000559209 UBE3BQ7Z3V4 1068 aa4.34□□□□□ -1.71
RNF111-206ENST00000559209 MSANTD4Q8NCY6 345 aa4.34□□□□□ -1.71
RNF111-206ENST00000559209 SMARCE1Q969G3 411 aa4.34□□□□□ -1.71
RNF111-206ENST00000559209 CNDP2Q96KP4 475 aaKnown RBP4.34□□□□□ -1.71
RNF111-206ENST00000559209 AP1M1Q9BXS5 423 aa4.34□□□□□ -1.71
RNF111-206ENST00000559209 USP26Q9BXU7 913 aa4.34□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms