RNA–Protein interactions for RNA: ENST00000558917.1

AC090888.3-201, humanhuman

BASIC

Gene AC090888.3, Length 509 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC090888.3-201ENST00000558917 MYO15AQ9UKN7 3530 aa8.35□□□□□ -1.07
AC090888.3-201ENST00000558917 CHD6Q8TD26 2715 aa8.35□□□□□ -1.07
AC090888.3-201ENST00000558917 TPRP12270 2363 aaKnown RBP8.34□□□□□ -1.07
AC090888.3-201ENST00000558917 PLXNB2O15031 1838 aa8.34□□□□□ -1.07
AC090888.3-201ENST00000558917 DMDP11532 3685 aa8.34□□□□□ -1.07
AC090888.3-201ENST00000558917 F8W031 263 aaPredicted RBP8.34□□□□□ -1.07
AC090888.3-201ENST00000558917 SMIM22K7EJ46 135 aa8.34□□□□□ -1.07
AC090888.3-201ENST00000558917 IRS4O14654 1257 aaPredicted RBP8.34□□□□□ -1.07
AC090888.3-201ENST00000558917 KRT37O76014 449 aa8.34□□□□□ -1.07
AC090888.3-201ENST00000558917 U2AF1L5P0DN76 240 aaPredicted RBP8.34□□□□□ -1.07
AC090888.3-201ENST00000558917 NFKB1P19838 968 aa8.34□□□□□ -1.07
AC090888.3-201ENST00000558917 U2AF1Q01081 240 aaKnown RBP eCLIP8.34□□□□□ -1.07
AC090888.3-201ENST00000558917 AIMP1Q12904 312 aaKnown RBP8.34□□□□□ -1.07
AC090888.3-201ENST00000558917 CCINQ13939 588 aa8.34□□□□□ -1.07
AC090888.3-201ENST00000558917 FMR1NBQ8N0W7 255 aaPredicted RBP8.34□□□□□ -1.07
AC090888.3-201ENST00000558917 FBXL18Q96ME1 805 aa8.34□□□□□ -1.07
AC090888.3-201ENST00000558917 GSX2Q9BZM3 304 aa8.34□□□□□ -1.07
AC090888.3-201ENST00000558917 COA1Q9GZY4 146 aa8.34□□□□□ -1.07
AC090888.3-201ENST00000558917 CD320Q9NPF0 282 aa8.34□□□□□ -1.07
AC090888.3-201ENST00000558917 NAGPAQ9UK23 515 aa8.34□□□□□ -1.07
AC090888.3-201ENST00000558917 CSADQ9Y600 493 aa8.34□□□□□ -1.07
AC090888.3-201ENST00000558917 WDR87Q6ZQQ6 2873 aa8.34□□□□□ -1.07
AC090888.3-201ENST00000558917 BRWD1Q9NSI6 2320 aa8.34□□□□□ -1.08
AC090888.3-201ENST00000558917 HMGCRP04035 888 aa8.33□□□□□ -1.08
AC090888.3-201ENST00000558917 LRP8Q14114 963 aa8.33□□□□□ -1.08
AC090888.3-201ENST00000558917 HSP90AB3PQ58FF7 597 aa8.33□□□□□ -1.08
AC090888.3-201ENST00000558917 MAP3K21Q5TCX8 1036 aa8.33□□□□□ -1.08
AC090888.3-201ENST00000558917 STAG2Q8N3U4 1231 aa8.33□□□□□ -1.08
AC090888.3-201ENST00000558917 PRDM12Q9H4Q4 367 aa8.33□□□□□ -1.08
AC090888.3-201ENST00000558917 ZNF576Q9H609 170 aa8.33□□□□□ -1.08
AC090888.3-201ENST00000558917 CXXC1Q9P0U4 656 aaPredicted RBP8.33□□□□□ -1.08
AC090888.3-201ENST00000558917 ZNF70Q9UC06 446 aaPredicted RBP8.33□□□□□ -1.08
AC090888.3-201ENST00000558917 GJD2Q9UKL4 321 aa8.33□□□□□ -1.08
AC090888.3-201ENST00000558917 AK9Q5TCS8 1911 aa8.33□□□□□ -1.08
AC090888.3-201ENST00000558917 ATRXP46100 2492 aa8.32□□□□□ -1.08
AC090888.3-201ENST00000558917 TNPO2O14787 897 aaKnown RBP8.32□□□□□ -1.08
AC090888.3-201ENST00000558917 RASA1P20936 1047 aa8.32□□□□□ -1.08
AC090888.3-201ENST00000558917 ITGB8P26012 769 aa8.32□□□□□ -1.08
AC090888.3-201ENST00000558917 INPP5BP32019 993 aa8.32□□□□□ -1.08
AC090888.3-201ENST00000558917 FAM35AQ86V20 835 aa8.32□□□□□ -1.08
AC090888.3-201ENST00000558917 TRIB2Q92519 343 aa8.32□□□□□ -1.08
AC090888.3-201ENST00000558917 BADQ92934 168 aa8.32□□□□□ -1.08
AC090888.3-201ENST00000558917 WRNIP1Q96S55 665 aa8.32□□□□□ -1.08
AC090888.3-201ENST00000558917 HINFPQ9BQA5 517 aa8.32□□□□□ -1.08
AC090888.3-201ENST00000558917 TDRD3Q9H7E2 651 aaKnown RBP8.32□□□□□ -1.08
AC090888.3-201ENST00000558917 MINPP1Q9UNW1 487 aa8.32□□□□□ -1.08
AC090888.3-201ENST00000558917 DAGLAQ9Y4D2 1042 aa8.32□□□□□ -1.08
AC090888.3-201ENST00000558917 CACNA1HO95180 2353 aa8.32□□□□□ -1.08
AC090888.3-201ENST00000558917 PRRC2BQ5JSZ5 2229 aaKnown RBP8.31□□□□□ -1.08
AC090888.3-201ENST00000558917 RIF1Q5UIP0 2472 aaKnown RBP8.31□□□□□ -1.08
AC090888.3-201ENST00000558917 NCOR2Q9Y618 2525 aa8.31□□□□□ -1.08
AC090888.3-201ENST00000558917 TCP10L2B9ZVM9 353 aa8.31□□□□□ -1.08
AC090888.3-201ENST00000558917 SNAP23O00161 211 aa8.31□□□□□ -1.08
AC090888.3-201ENST00000558917 DKK1O94907 266 aa8.31□□□□□ -1.08
AC090888.3-201ENST00000558917 CPB1P15086 417 aa8.31□□□□□ -1.08
AC090888.3-201ENST00000558917 EIF2S2P20042 333 aaKnown RBP8.31□□□□□ -1.08
AC090888.3-201ENST00000558917 CCT4P50991 539 aaKnown RBP8.31□□□□□ -1.08
AC090888.3-201ENST00000558917 SEC13P55735 322 aa8.31□□□□□ -1.08
AC090888.3-201ENST00000558917 JARID2Q92833 1246 aaPredicted RBP8.31□□□□□ -1.08
AC090888.3-201ENST00000558917 PARK7Q99497 189 aaKnown RBP8.31□□□□□ -1.08
AC090888.3-201ENST00000558917 JAG2Q9Y219 1238 aa8.31□□□□□ -1.08
AC090888.3-201ENST00000558917 SPEF2Q9C093 1822 aa8.31□□□□□ -1.08
AC090888.3-201ENST00000558917 PI4K2BG5E9Z4 385 aa8.3□□□□□ -1.08
AC090888.3-201ENST00000558917 HYAL3O43820 417 aaPredicted RBP8.3□□□□□ -1.08
AC090888.3-201ENST00000558917 LGR5O75473 907 aa8.3□□□□□ -1.08
AC090888.3-201ENST00000558917 PPATQ06203 517 aa8.3□□□□□ -1.08
AC090888.3-201ENST00000558917 RTN1Q16799 776 aa8.3□□□□□ -1.08
AC090888.3-201ENST00000558917 IER5Q5VY09 327 aa8.3□□□□□ -1.08
AC090888.3-201ENST00000558917 KRT25Q7Z3Z0 450 aa8.3□□□□□ -1.08
AC090888.3-201ENST00000558917 RTF1Q92541 710 aaKnown RBP8.3□□□□□ -1.08
AC090888.3-201ENST00000558917 FRMPD3Q5JV73 1810 aa8.3□□□□□ -1.08
AC090888.3-201ENST00000558917 TRIM43BA6NCK2 446 aa8.29□□□□□ -1.08
AC090888.3-201ENST00000558917 TGFBR3LH3BV60 316 aa8.29□□□□□ -1.08
AC090888.3-201ENST00000558917 MYO1BO43795 1136 aa8.29□□□□□ -1.08
AC090888.3-201ENST00000558917 EPB42P16452 691 aa8.29□□□□□ -1.08
AC090888.3-201ENST00000558917 CCND3P30281 292 aaPredicted RBP8.29□□□□□ -1.08
AC090888.3-201ENST00000558917 CACNB3P54284 484 aa8.29□□□□□ -1.08
AC090888.3-201ENST00000558917 RTP1P59025 263 aa8.29□□□□□ -1.08
AC090888.3-201ENST00000558917 PCSK7Q16549 785 aa8.29□□□□□ -1.08
AC090888.3-201ENST00000558917 TRIM43Q96BQ3 446 aaPredicted RBP8.29□□□□□ -1.08
AC090888.3-201ENST00000558917 TIFAQ96CG3 184 aa8.29□□□□□ -1.08
AC090888.3-201ENST00000558917 SENP6Q9GZR1 1112 aaPredicted RBP8.29□□□□□ -1.08
AC090888.3-201ENST00000558917 CD209Q9NNX6 404 aa8.29□□□□□ -1.08
AC090888.3-201ENST00000558917 PLXNA1Q9UIW2 1896 aa8.29□□□□□ -1.08
AC090888.3-201ENST00000558917 VPS13AQ96RL7 3174 aa8.29□□□□□ -1.08
AC090888.3-201ENST00000558917 RLFQ13129 1914 aa8.29□□□□□ -1.08
AC090888.3-201ENST00000558917 LRRC37A2A6NM11 1700 aa8.29□□□□□ -1.08
AC090888.3-201ENST00000558917 DNAH14Q0VDD8 3507 aa8.28□□□□□ -1.08
AC090888.3-201ENST00000558917 GRXCR1A8MXD5 290 aa8.28□□□□□ -1.08
AC090888.3-201ENST00000558917 PRR33A8MZF0 331 aa8.28□□□□□ -1.08
AC090888.3-201ENST00000558917 HTATSF1O43719 755 aaKnown RBP8.28□□□□□ -1.08
AC090888.3-201ENST00000558917 FLIIQ13045 1269 aa8.28□□□□□ -1.08
AC090888.3-201ENST00000558917 ANKRD18AQ8IVF6 992 aa8.28□□□□□ -1.08
AC090888.3-201ENST00000558917 WFDC12Q8WWY7 111 aa8.28□□□□□ -1.08
AC090888.3-201ENST00000558917 RNPC3Q96LT9 517 aaKnown RBP8.28□□□□□ -1.08
AC090888.3-201ENST00000558917 SSBP4Q9BWG4 385 aaPredicted RBP8.28□□□□□ -1.08
AC090888.3-201ENST00000558917 PDLIM7Q9NR12 457 aa8.28□□□□□ -1.08
AC090888.3-201ENST00000558917 DLG5Q8TDM6 1919 aa8.27□□□□□ -1.09
AC090888.3-201ENST00000558917 CACNB2Q08289 660 aaPredicted RBP8.27□□□□□ -1.09
AC090888.3-201ENST00000558917 TNFAIP1Q13829 316 aa8.27□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms