RNA–Protein interactions for RNA: ENST00000558867.1

CDC42BPB-203, Transcript of CDC42 binding protein kinase beta, humanhuman

TSL 3

Gene CDC42BPB, Length 635 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPB-203ENST00000558867 APPBP2Q92624 585 aa19■□□□□ 0.63
CDC42BPB-203ENST00000558867 CEP95Q96GE4 821 aa19■□□□□ 0.63
CDC42BPB-203ENST00000558867 UHRF1Q96T88 793 aaPredicted RBP19■□□□□ 0.63
CDC42BPB-203ENST00000558867 NACAP1Q9BZK3 213 aa19■□□□□ 0.63
CDC42BPB-203ENST00000558867 ECHDC1Q9NTX5 307 aa19■□□□□ 0.63
CDC42BPB-203ENST00000558867 IGKV6D-41A0A0C4DH26 115 aa18.99■□□□□ 0.63
CDC42BPB-203ENST00000558867 ADCY6O43306 1168 aa18.99■□□□□ 0.63
CDC42BPB-203ENST00000558867 CHGBP05060 677 aa18.99■□□□□ 0.63
CDC42BPB-203ENST00000558867 BEX3Q00994 111 aa18.99■□□□□ 0.63
CDC42BPB-203ENST00000558867 FSCN1Q16658 493 aaKnown RBP18.99■□□□□ 0.63
CDC42BPB-203ENST00000558867 AAK1Q2M2I8 961 aa18.99■□□□□ 0.63
CDC42BPB-203ENST00000558867 CXCL17Q6UXB2 119 aa18.99■□□□□ 0.63
CDC42BPB-203ENST00000558867 TLK2Q86UE8 772 aa18.99■□□□□ 0.63
CDC42BPB-203ENST00000558867 KBTBD3Q8NAB2 608 aa18.99■□□□□ 0.63
CDC42BPB-203ENST00000558867 SLC43A3Q8NBI5 491 aa18.99■□□□□ 0.63
CDC42BPB-203ENST00000558867 NKX2-4Q9H2Z4 354 aa18.99■□□□□ 0.63
CDC42BPB-203ENST00000558867 SLC4A7Q9Y6M7 1214 aa18.99■□□□□ 0.63
CDC42BPB-203ENST00000558867 GREB1LQ9C091 1923 aaPredicted RBP18.99■□□□□ 0.63
CDC42BPB-203ENST00000558867 TMEM232C9JQI7 657 aa18.98■□□□□ 0.63
CDC42BPB-203ENST00000558867 IRX5P78411 483 aaPredicted RBP18.98■□□□□ 0.63
CDC42BPB-203ENST00000558867 CNTN2Q02246 1040 aa18.98■□□□□ 0.63
CDC42BPB-203ENST00000558867 IQSEC1Q6DN90 963 aa18.98■□□□□ 0.63
CDC42BPB-203ENST00000558867 OTOP2Q7RTS6 562 aa18.98■□□□□ 0.63
CDC42BPB-203ENST00000558867 LRRC47Q8N1G4 583 aaKnown RBP18.98■□□□□ 0.63
CDC42BPB-203ENST00000558867 FAM133AQ8N9E0 248 aa18.98■□□□□ 0.63
CDC42BPB-203ENST00000558867 FGD4Q96M96 766 aa18.98■□□□□ 0.63
CDC42BPB-203ENST00000558867 RNF146Q9NTX7 359 aa18.98■□□□□ 0.63
CDC42BPB-203ENST00000558867 Q9Y3F1 56 aa18.98■□□□□ 0.63
CDC42BPB-203ENST00000558867 MYH4Q9Y623 1939 aa18.98■□□□□ 0.63
CDC42BPB-203ENST00000558867 RNF113AO15541 343 aaKnown RBP18.97■□□□□ 0.63
CDC42BPB-203ENST00000558867 DYNC1LI2O43237 492 aaPredicted RBP18.97■□□□□ 0.63
CDC42BPB-203ENST00000558867 SUPT20HL2P0C7V6 817 aa18.97■□□□□ 0.63
CDC42BPB-203ENST00000558867 PPP2R2DQ66LE6 453 aa18.97■□□□□ 0.63
CDC42BPB-203ENST00000558867 STAG1Q8WVM7 1258 aa18.97■□□□□ 0.63
CDC42BPB-203ENST00000558867 TRERF1Q96PN7 1200 aa18.97■□□□□ 0.63
CDC42BPB-203ENST00000558867 KATNBL1Q9H079 304 aa18.97■□□□□ 0.63
CDC42BPB-203ENST00000558867 NCOR1O75376 2440 aa18.97■□□□□ 0.63
CDC42BPB-203ENST00000558867 MCM3APO60318 1980 aa18.97■□□□□ 0.63
CDC42BPB-203ENST00000558867 PATL2C9JE40 543 aaKnown RBP18.96■□□□□ 0.63
CDC42BPB-203ENST00000558867 CTAGE5O15320 804 aa18.96■□□□□ 0.63
CDC42BPB-203ENST00000558867 GPAA1O43292 621 aa18.96■□□□□ 0.63
CDC42BPB-203ENST00000558867 PRDM1O75626 825 aa18.96■□□□□ 0.63
CDC42BPB-203ENST00000558867 PFKMP08237 780 aa18.96■□□□□ 0.63
CDC42BPB-203ENST00000558867 SLC1A4P43007 532 aa18.96■□□□□ 0.63
CDC42BPB-203ENST00000558867 CCL23P55773 120 aa18.96■□□□□ 0.63
CDC42BPB-203ENST00000558867 NEDD1Q8NHV4 660 aa18.96■□□□□ 0.63
CDC42BPB-203ENST00000558867 GMCL1Q96IK5 515 aa18.96■□□□□ 0.63
CDC42BPB-203ENST00000558867 A1CFQ9NQ94 594 aaKnown RBP18.96■□□□□ 0.63
CDC42BPB-203ENST00000558867 CXXC1Q9P0U4 656 aaPredicted RBP18.96■□□□□ 0.63
CDC42BPB-203ENST00000558867 GNEQ9Y223 722 aaKnown RBP18.96■□□□□ 0.63
CDC42BPB-203ENST00000558867 PCDHA11Q9Y5I1 949 aa18.96■□□□□ 0.63
CDC42BPB-203ENST00000558867 BDP1A6H8Y1 2624 aa18.96■□□□□ 0.63
CDC42BPB-203ENST00000558867 MUC3AQ02505 3323 aa18.95■□□□□ 0.62
CDC42BPB-203ENST00000558867 C11orf97A0A1B0GVM6 126 aaPredicted RBP18.95■□□□□ 0.62
CDC42BPB-203ENST00000558867 ZBBXA8MT70 800 aa18.95■□□□□ 0.62
CDC42BPB-203ENST00000558867 PLA2G6O60733 806 aa18.95■□□□□ 0.62
CDC42BPB-203ENST00000558867 ALAS1P13196 640 aa18.95■□□□□ 0.62
CDC42BPB-203ENST00000558867 ADGRE1Q14246 886 aa18.95■□□□□ 0.62
CDC42BPB-203ENST00000558867 OSBP2Q969R2 916 aa18.95■□□□□ 0.62
CDC42BPB-203ENST00000558867 CHD9Q3L8U1 2897 aa18.95■□□□□ 0.62
CDC42BPB-203ENST00000558867 GTPBP6O43824 516 aaPredicted RBP18.94■□□□□ 0.62
CDC42BPB-203ENST00000558867 ACTN1P12814 892 aa18.94■□□□□ 0.62
CDC42BPB-203ENST00000558867 TFAP4Q01664 338 aa18.94■□□□□ 0.62
CDC42BPB-203ENST00000558867 BRDTQ58F21 947 aaPredicted RBP18.94■□□□□ 0.62
CDC42BPB-203ENST00000558867 IFNL3Q8IZI9 196 aa18.94■□□□□ 0.62
CDC42BPB-203ENST00000558867 AGBL1Q96MI9 1066 aa18.94■□□□□ 0.62
CDC42BPB-203ENST00000558867 NOC4LQ9BVI4 516 aaKnown RBP18.94■□□□□ 0.62
CDC42BPB-203ENST00000558867 VTA1Q9NP79 307 aa18.94■□□□□ 0.62
CDC42BPB-203ENST00000558867 POLR3EQ9NVU0 708 aa18.94■□□□□ 0.62
CDC42BPB-203ENST00000558867 PLIN4Q96Q06 1357 aa18.93■□□□□ 0.62
CDC42BPB-203ENST00000558867 SOWAHBA6NEL2 793 aa18.93■□□□□ 0.62
CDC42BPB-203ENST00000558867 ATP2A2P16615 1042 aaKnown RBP18.93■□□□□ 0.62
CDC42BPB-203ENST00000558867 SMPD1P17405 629 aa18.93■□□□□ 0.62
CDC42BPB-203ENST00000558867 SKIV2LQ15477 1246 aaKnown RBP18.93■□□□□ 0.62
CDC42BPB-203ENST00000558867 KIAA1211Q6ZU35 1233 aa18.93■□□□□ 0.62
CDC42BPB-203ENST00000558867 MICALL1Q8N3F8 863 aa18.93■□□□□ 0.62
CDC42BPB-203ENST00000558867 C1QTNF1Q9BXJ1 281 aa18.93■□□□□ 0.62
CDC42BPB-203ENST00000558867 NAPBQ9H115 298 aa18.93■□□□□ 0.62
CDC42BPB-203ENST00000558867 TRPV6Q9H1D0 765 aa18.93■□□□□ 0.62
CDC42BPB-203ENST00000558867 GPHNQ9NQX3 736 aaPredicted RBP18.93■□□□□ 0.62
CDC42BPB-203ENST00000558867 ADD3Q9UEY8 706 aaKnown RBP18.93■□□□□ 0.62
CDC42BPB-203ENST00000558867 YBX2Q9Y2T7 364 aaKnown RBP18.93■□□□□ 0.62
CDC42BPB-203ENST00000558867 SMARCA5O60264 1052 aaPredicted RBP18.92■□□□□ 0.62
CDC42BPB-203ENST00000558867 B4GALT4O60513 344 aa18.92■□□□□ 0.62
CDC42BPB-203ENST00000558867 MCCP23508 829 aa18.92■□□□□ 0.62
CDC42BPB-203ENST00000558867 TMEM67Q5HYA8 995 aa18.92■□□□□ 0.62
CDC42BPB-203ENST00000558867 RCSD1Q6JBY9 416 aa18.92■□□□□ 0.62
CDC42BPB-203ENST00000558867 MPHOSPH6Q99547 160 aaKnown RBP18.92■□□□□ 0.62
CDC42BPB-203ENST00000558867 EPB41L4AQ9HCS5 686 aaPredicted RBP18.92■□□□□ 0.62
CDC42BPB-203ENST00000558867 STX8Q9UNK0 236 aa18.92■□□□□ 0.62
CDC42BPB-203ENST00000558867 ASTN1O14525 1302 aa18.92■□□□□ 0.62
CDC42BPB-203ENST00000558867 UMODL1Q5DID0 1318 aa18.92■□□□□ 0.62
CDC42BPB-203ENST00000558867 LOC102724159A0A0B4J2E5 919 aa18.91■□□□□ 0.62
CDC42BPB-203ENST00000558867 CPT1AP50416 773 aa18.91■□□□□ 0.62
CDC42BPB-203ENST00000558867 RABGGTBP53611 331 aa18.91■□□□□ 0.62
CDC42BPB-203ENST00000558867 PWP2Q15269 919 aaKnown RBP18.91■□□□□ 0.62
CDC42BPB-203ENST00000558867 NSMFQ6X4W1 530 aa18.91■□□□□ 0.62
CDC42BPB-203ENST00000558867 EEPD1Q7L9B9 569 aa18.91■□□□□ 0.62
CDC42BPB-203ENST00000558867 FAM122AQ96E09 287 aa18.91■□□□□ 0.62
CDC42BPB-203ENST00000558867 ALDH8A1Q9H2A2 487 aaPredicted RBP18.91■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms