RNA–Protein interactions for RNA: ENST00000558861.1

LRRC28-209, Transcript of leucine rich repeat containing 28, humanhuman

TSL 3

Gene LRRC28, Length 744 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28-209ENST00000558861 TPSG1Q9NRR2 321 aa8.14□□□□□ -1.11
LRRC28-209ENST00000558861 R3HCC1Q9Y3T6 440 aaKnown RBP8.14□□□□□ -1.11
LRRC28-209ENST00000558861 ABCA3Q99758 1704 aa8.13□□□□□ -1.11
LRRC28-209ENST00000558861 RAB33AQ14088 237 aa8.13□□□□□ -1.11
LRRC28-209ENST00000558861 LARP1BQ659C4 914 aaKnown RBP8.13□□□□□ -1.11
LRRC28-209ENST00000558861 PAOXQ6QHF9 649 aa8.13□□□□□ -1.11
LRRC28-209ENST00000558861 HDGFL2Q7Z4V5 671 aaPredicted RBP8.13□□□□□ -1.11
LRRC28-209ENST00000558861 MICAL1Q8TDZ2 1067 aa8.13□□□□□ -1.11
LRRC28-209ENST00000558861 CCDC74BQ96LY2 380 aa8.13□□□□□ -1.11
LRRC28-209ENST00000558861 TRIM55Q9BYV6 548 aa8.13□□□□□ -1.11
LRRC28-209ENST00000558861 C7orf69Q9H7B7 122 aa8.13□□□□□ -1.11
LRRC28-209ENST00000558861 PANK3Q9H999 370 aa8.13□□□□□ -1.11
LRRC28-209ENST00000558861 NFAT5O94916 1531 aa8.13□□□□□ -1.11
LRRC28-209ENST00000558861 CPDO75976 1380 aa8.12□□□□□ -1.11
LRRC28-209ENST00000558861 LTBP3Q9NS15 1303 aa8.12□□□□□ -1.11
LRRC28-209ENST00000558861 RBAK-RBAKDNI3L0D1 243 aa8.12□□□□□ -1.11
LRRC28-209ENST00000558861 RGS13O14921 159 aa8.12□□□□□ -1.11
LRRC28-209ENST00000558861 SLITRK5O94991 958 aa8.12□□□□□ -1.11
LRRC28-209ENST00000558861 SERINC3Q13530 473 aa8.12□□□□□ -1.11
LRRC28-209ENST00000558861 NBPF6Q5VWK0 638 aa8.12□□□□□ -1.11
LRRC28-209ENST00000558861 INTS3Q68E01 1043 aaKnown RBP8.12□□□□□ -1.11
LRRC28-209ENST00000558861 LETMD1Q6P1Q0 360 aa8.12□□□□□ -1.11
LRRC28-209ENST00000558861 CLEC10AQ8IUN9 316 aa8.12□□□□□ -1.11
LRRC28-209ENST00000558861 TOP6BLQ8N6T0 577 aa8.12□□□□□ -1.11
LRRC28-209ENST00000558861 MFSD2AQ8NA29 543 aa8.12□□□□□ -1.11
LRRC28-209ENST00000558861 PPP1R13LQ8WUF5 828 aa8.12□□□□□ -1.11
LRRC28-209ENST00000558861 NBPF4Q96M43 638 aa8.12□□□□□ -1.11
LRRC28-209ENST00000558861 FAM83CQ9BQN1 747 aa8.12□□□□□ -1.11
LRRC28-209ENST00000558861 PRDM10Q9NQV6 1147 aa8.12□□□□□ -1.11
LRRC28-209ENST00000558861 RAXQ9Y2V3 346 aa8.12□□□□□ -1.11
LRRC28-209ENST00000558861 NPC1L1Q9UHC9 1359 aa8.11□□□□□ -1.11
LRRC28-209ENST00000558861 B2RBV5 119 aa8.11□□□□□ -1.11
LRRC28-209ENST00000558861 LEFTY1O75610 366 aa8.11□□□□□ -1.11
LRRC28-209ENST00000558861 ADMP35318 185 aa8.11□□□□□ -1.11
LRRC28-209ENST00000558861 CCDC144BQ3MJ40 725 aa8.11□□□□□ -1.11
LRRC28-209ENST00000558861 SOGA3Q5TF21 947 aa8.11□□□□□ -1.11
LRRC28-209ENST00000558861 PRR23CQ6ZRP0 262 aa8.11□□□□□ -1.11
LRRC28-209ENST00000558861 SUGP2Q8IX01 1082 aaKnown RBP eCLIP8.11□□□□□ -1.11
LRRC28-209ENST00000558861 TMEM192Q8IY95 271 aa8.11□□□□□ -1.11
LRRC28-209ENST00000558861 DNAJB8Q8NHS0 232 aa8.11□□□□□ -1.11
LRRC28-209ENST00000558861 RIN3Q8TB24 985 aa8.11□□□□□ -1.11
LRRC28-209ENST00000558861 GATA6Q92908 595 aa8.11□□□□□ -1.11
LRRC28-209ENST00000558861 SLC6A18Q96N87 628 aa8.11□□□□□ -1.11
LRRC28-209ENST00000558861 OSBPL2Q9H1P3 480 aa8.11□□□□□ -1.11
LRRC28-209ENST00000558861 ST7Q9NRC1 585 aa8.11□□□□□ -1.11
LRRC28-209ENST00000558861 STOML1Q9UBI4 398 aa8.11□□□□□ -1.11
LRRC28-209ENST00000558861 PCDHB10Q9UN67 800 aa8.11□□□□□ -1.11
LRRC28-209ENST00000558861 PHRF1Q9P1Y6 1649 aaKnown RBP8.11□□□□□ -1.11
LRRC28-209ENST00000558861 SLIT2O94813 1529 aa8.1□□□□□ -1.11
LRRC28-209ENST00000558861 GCP02774 474 aa8.1□□□□□ -1.11
LRRC28-209ENST00000558861 GBP1P32455 592 aa8.1□□□□□ -1.11
LRRC28-209ENST00000558861 CDH24Q86UP0 819 aa8.1□□□□□ -1.11
LRRC28-209ENST00000558861 SHISA5Q8N114 240 aa8.1□□□□□ -1.11
LRRC28-209ENST00000558861 TBC1D32Q96NH3 1257 aa8.1□□□□□ -1.11
LRRC28-209ENST00000558861 DUSP23Q9BVJ7 150 aa8.1□□□□□ -1.11
LRRC28-209ENST00000558861 RGS17Q9UGC6 210 aaPredicted RBP8.1□□□□□ -1.11
LRRC28-209ENST00000558861 U2SURPO15042 1029 aaKnown RBP8.09□□□□□ -1.11
LRRC28-209ENST00000558861 FAM87AP0C7U9 286 aa8.09□□□□□ -1.11
LRRC28-209ENST00000558861 CCNFP41002 786 aa8.09□□□□□ -1.11
LRRC28-209ENST00000558861 DOC2BQ14184 412 aa8.09□□□□□ -1.11
LRRC28-209ENST00000558861 BMS1Q14692 1282 aaKnown RBP8.09□□□□□ -1.11
LRRC28-209ENST00000558861 DDR2Q16832 855 aa8.09□□□□□ -1.11
LRRC28-209ENST00000558861 TDRD10Q5VZ19 366 aaKnown RBP8.09□□□□□ -1.11
LRRC28-209ENST00000558861 C6orf15Q6UXA7 325 aaPredicted RBP8.09□□□□□ -1.11
LRRC28-209ENST00000558861 ARHGEF25Q86VW2 580 aa8.09□□□□□ -1.11
LRRC28-209ENST00000558861 PPFIBP1Q86W92 1011 aa8.09□□□□□ -1.11
LRRC28-209ENST00000558861 POLR3GLQ9BT43 218 aa8.09□□□□□ -1.11
LRRC28-209ENST00000558861 ZSWIM4Q9H7M6 989 aa8.09□□□□□ -1.11
LRRC28-209ENST00000558861 FAM86C1Q9NVL1 165 aa8.09□□□□□ -1.11
LRRC28-209ENST00000558861 MAPK8IP1Q9UQF2 711 aa8.09□□□□□ -1.11
LRRC28-209ENST00000558861 SLC12A7Q9Y666 1083 aa8.09□□□□□ -1.11
LRRC28-209ENST00000558861 KIAA0232Q92628 1395 aa8.09□□□□□ -1.12
LRRC28-209ENST00000558861 LMO7Q8WWI1 1683 aa8.08□□□□□ -1.12
LRRC28-209ENST00000558861 EP400Q96L91 3159 aa8.08□□□□□ -1.12
LRRC28-209ENST00000558861 CGNL1Q0VF96 1302 aa8.08□□□□□ -1.12
LRRC28-209ENST00000558861 BCL9LQ86UU0 1499 aa8.08□□□□□ -1.12
LRRC28-209ENST00000558861 FAM83GA6ND36 823 aa8.08□□□□□ -1.12
LRRC28-209ENST00000558861 CCDC85CA6NKD9 419 aa8.08□□□□□ -1.12
LRRC28-209ENST00000558861 PROCP04070 461 aa8.08□□□□□ -1.12
LRRC28-209ENST00000558861 FBLN1P23142 703 aa8.08□□□□□ -1.12
LRRC28-209ENST00000558861 FXNQ16595 210 aa8.08□□□□□ -1.12
LRRC28-209ENST00000558861 ZAR1Q86SH2 424 aa8.08□□□□□ -1.12
LRRC28-209ENST00000558861 FBXL6Q8N531 539 aa8.08□□□□□ -1.12
LRRC28-209ENST00000558861 ZNF512BQ96KM6 892 aaPredicted RBP8.08□□□□□ -1.12
LRRC28-209ENST00000558861 MFSD14AQ96MC6 490 aa8.08□□□□□ -1.12
LRRC28-209ENST00000558861 PIF1Q9H611 641 aa8.08□□□□□ -1.12
LRRC28-209ENST00000558861 PHAXQ9H814 394 aaKnown RBP8.08□□□□□ -1.12
LRRC28-209ENST00000558861 ZNF214Q9UL59 606 aaPredicted RBP8.08□□□□□ -1.12
LRRC28-209ENST00000558861 CEP131Q9UPN4 1083 aa8.08□□□□□ -1.12
LRRC28-209ENST00000558861 NSD2O96028 1365 aa8.08□□□□□ -1.12
LRRC28-209ENST00000558861 AATKQ6ZMQ8 1374 aa8.08□□□□□ -1.12
LRRC28-209ENST00000558861 COL18A1P39060 1754 aa8.07□□□□□ -1.12
LRRC28-209ENST00000558861 K7ELQ4 463 aaPredicted RBP8.07□□□□□ -1.12
LRRC28-209ENST00000558861 CLEC3AO75596 197 aa8.07□□□□□ -1.12
LRRC28-209ENST00000558861 DDAH1O94760 285 aa8.07□□□□□ -1.12
LRRC28-209ENST00000558861 GJB6O95452 261 aa8.07□□□□□ -1.12
LRRC28-209ENST00000558861 EOMESO95936 686 aa8.07□□□□□ -1.12
LRRC28-209ENST00000558861 KLHL6Q8WZ60 621 aa8.07□□□□□ -1.12
LRRC28-209ENST00000558861 SIRPGQ9P1W8 387 aa8.07□□□□□ -1.12
LRRC28-209ENST00000558861 SUCOQ9UBS9 1254 aaKnown RBP8.07□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms