RNA–Protein interactions for RNA: ENST00000558735.1

CASC4-205, Transcript of cancer susceptibility 4, humanhuman

TSL 3

Gene CASC4, Length 427 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC4-205ENST00000558735 SDSP20132 328 aa13.61□□□□□ -0.23
CASC4-205ENST00000558735 HAND2P61296 217 aa13.61□□□□□ -0.23
CASC4-205ENST00000558735 IKQ13123 557 aaPredicted RBP13.61□□□□□ -0.23
CASC4-205ENST00000558735 KCNA10Q16322 511 aa13.61□□□□□ -0.23
CASC4-205ENST00000558735 CCDC144BQ3MJ40 725 aa13.61□□□□□ -0.23
CASC4-205ENST00000558735 RRP12Q5JTH9 1297 aaKnown RBP13.61□□□□□ -0.23
CASC4-205ENST00000558735 RASIP1Q5U651 963 aa13.61□□□□□ -0.23
CASC4-205ENST00000558735 TTBK2Q6IQ55 1244 aa13.61□□□□□ -0.23
CASC4-205ENST00000558735 CCDC144CPQ8IYA2 1237 aa13.61□□□□□ -0.23
CASC4-205ENST00000558735 TRERF1Q96PN7 1200 aa13.61□□□□□ -0.23
CASC4-205ENST00000558735 TMEM47Q9BQJ4 181 aa13.61□□□□□ -0.23
CASC4-205ENST00000558735 KATNBL1Q9H079 304 aa13.61□□□□□ -0.23
CASC4-205ENST00000558735 ACAD9Q9H845 621 aa13.61□□□□□ -0.23
CASC4-205ENST00000558735 A1CFQ9NQ94 594 aaKnown RBP13.61□□□□□ -0.23
CASC4-205ENST00000558735 TOMM22Q9NS69 142 aa13.61□□□□□ -0.23
CASC4-205ENST00000558735 RNF146Q9NTX7 359 aa13.61□□□□□ -0.23
CASC4-205ENST00000558735 TMEM39AQ9NV64 488 aa13.61□□□□□ -0.23
CASC4-205ENST00000558735 ZHX1Q9UKY1 873 aaPredicted RBP13.61□□□□□ -0.23
CASC4-205ENST00000558735 MYADML2A6NDP7 307 aa13.6□□□□□ -0.23
CASC4-205ENST00000558735 TIMP1P01033 207 aa13.6□□□□□ -0.23
CASC4-205ENST00000558735 ALAS1P13196 640 aa13.6□□□□□ -0.23
CASC4-205ENST00000558735 SLC16A2P36021 539 aa13.6□□□□□ -0.23
CASC4-205ENST00000558735 ACLYP53396 1101 aa13.6□□□□□ -0.23
CASC4-205ENST00000558735 TKFCQ3LXA3 575 aa13.6□□□□□ -0.23
CASC4-205ENST00000558735 MUM1L1Q5H9M0 696 aa13.6□□□□□ -0.23
CASC4-205ENST00000558735 CCDC174Q6PII3 467 aa13.6□□□□□ -0.23
CASC4-205ENST00000558735 BTNL9Q6UXG8 535 aa13.6□□□□□ -0.23
CASC4-205ENST00000558735 ARMCX2Q7L311 632 aa13.6□□□□□ -0.23
CASC4-205ENST00000558735 TIFAQ96CG3 184 aa13.6□□□□□ -0.23
CASC4-205ENST00000558735 PLXNA1Q9UIW2 1896 aa13.6□□□□□ -0.23
CASC4-205ENST00000558735 TBX21Q9UL17 535 aa13.6□□□□□ -0.23
CASC4-205ENST00000558735 CCDC171Q6TFL3 1326 aa13.6□□□□□ -0.23
CASC4-205ENST00000558735 SYNRGQ9UMZ2 1314 aa13.6□□□□□ -0.23
CASC4-205ENST00000558735 NCOR1O75376 2440 aa13.59□□□□□ -0.23
CASC4-205ENST00000558735 MOXD2PA6NHM9 499 aa13.59□□□□□ -0.23
CASC4-205ENST00000558735 DCDC2CA8MYV0 355 aa13.59□□□□□ -0.23
CASC4-205ENST00000558735 PQBP1O60828 265 aaKnown RBP13.59□□□□□ -0.23
CASC4-205ENST00000558735 TOP1P11387 765 aaKnown RBP13.59□□□□□ -0.23
CASC4-205ENST00000558735 MFSD5Q6N075 450 aa13.59□□□□□ -0.23
CASC4-205ENST00000558735 MFSD6Q6ZSS7 791 aa13.59□□□□□ -0.23
CASC4-205ENST00000558735 NUP133Q8WUM0 1156 aa13.59□□□□□ -0.23
CASC4-205ENST00000558735 DCAF4Q8WV16 495 aa13.59□□□□□ -0.23
CASC4-205ENST00000558735 TTC14Q96N46 770 aa13.59□□□□□ -0.23
CASC4-205ENST00000558735 ASB2Q96Q27 587 aa13.59□□□□□ -0.23
CASC4-205ENST00000558735 DDX49Q9Y6V7 483 aaKnown RBP13.59□□□□□ -0.23
CASC4-205ENST00000558735 ZMYM6O95789 1325 aa13.59□□□□□ -0.23
CASC4-205ENST00000558735 REV3LO60673 3130 aa13.59□□□□□ -0.23
CASC4-205ENST00000558735 TRANK1O15050 2925 aa13.58□□□□□ -0.24
CASC4-205ENST00000558735 XIRP2A4UGR9 3374 aa13.58□□□□□ -0.24
CASC4-205ENST00000558735 CTAGE5O15320 804 aa13.58□□□□□ -0.24
CASC4-205ENST00000558735 CDK7P50613 346 aa13.58□□□□□ -0.24
CASC4-205ENST00000558735 GJA9P57773 515 aa13.58□□□□□ -0.24
CASC4-205ENST00000558735 C16orf59Q7L2K0 433 aa13.58□□□□□ -0.24
CASC4-205ENST00000558735 TBC1D10CQ8IV04 446 aa13.58□□□□□ -0.24
CASC4-205ENST00000558735 PURBQ96QR8 312 aaKnown RBP13.58□□□□□ -0.24
CASC4-205ENST00000558735 BUD13Q9BRD0 619 aaKnown RBP eCLIP13.58□□□□□ -0.246e-12■□□□□ 8.7
CASC4-205ENST00000558735 UPF3AQ9H1J1 476 aaKnown RBP13.58□□□□□ -0.24
CASC4-205ENST00000558735 RANBP17Q9H2T7 1088 aaKnown RBP13.58□□□□□ -0.24
CASC4-205ENST00000558735 GPCPD1Q9NPB8 672 aa13.58□□□□□ -0.24
CASC4-205ENST00000558735 ASTN1O14525 1302 aa13.58□□□□□ -0.24
CASC4-205ENST00000558735 ELP1O95163 1332 aa13.58□□□□□ -0.24
CASC4-205ENST00000558735 C11orf97A0A1B0GVM6 126 aaPredicted RBP13.57□□□□□ -0.24
CASC4-205ENST00000558735 ASB14A6NK59 587 aa13.57□□□□□ -0.24
CASC4-205ENST00000558735 ICAM1P05362 532 aa13.57□□□□□ -0.24
CASC4-205ENST00000558735 ASGR1P07306 291 aa13.57□□□□□ -0.24
CASC4-205ENST00000558735 C6orf222P0C671 652 aaPredicted RBP13.57□□□□□ -0.24
CASC4-205ENST00000558735 PCP11498 1178 aaKnown RBP13.57□□□□□ -0.24
CASC4-205ENST00000558735 CST5P28325 142 aaPredicted RBP13.57□□□□□ -0.24
CASC4-205ENST00000558735 NKX3-2P78367 333 aa13.57□□□□□ -0.24
CASC4-205ENST00000558735 CCDC96Q2M329 555 aa13.57□□□□□ -0.24
CASC4-205ENST00000558735 GNASQ5JWF2 1037 aa13.57□□□□□ -0.24
CASC4-205ENST00000558735 TMEM240Q5SV17 173 aa13.57□□□□□ -0.24
CASC4-205ENST00000558735 SYDE2Q5VT97 1194 aa13.57□□□□□ -0.24
CASC4-205ENST00000558735 CWC27Q6UX04 472 aaKnown RBP13.57□□□□□ -0.24
CASC4-205ENST00000558735 GAS2L1Q99501 681 aaPredicted RBP13.57□□□□□ -0.24
CASC4-205ENST00000558735 STARD7Q9NQZ5 370 aa13.57□□□□□ -0.24
CASC4-205ENST00000558735 CYP39A1Q9NYL5 469 aa13.57□□□□□ -0.24
CASC4-205ENST00000558735 CCPG1Q9ULG6 757 aa13.57□□□□□ -0.24
CASC4-205ENST00000558735 MROH7Q68CQ1 1323 aa13.57□□□□□ -0.24
CASC4-205ENST00000558735 ZNF213O14771 459 aa13.56□□□□□ -0.24
CASC4-205ENST00000558735 SNHG28P0DPA3 235 aa13.56□□□□□ -0.24
CASC4-205ENST00000558735 PDHBP11177 359 aa13.56□□□□□ -0.24
CASC4-205ENST00000558735 MFAP1P55081 439 aaKnown RBP13.56□□□□□ -0.24
CASC4-205ENST00000558735 MRPS5P82675 430 aaKnown RBP13.56□□□□□ -0.24
CASC4-205ENST00000558735 TNFAIP2Q03169 654 aa13.56□□□□□ -0.24
CASC4-205ENST00000558735 PPIGQ13427 754 aaKnown RBP eCLIP13.56□□□□□ -0.24
CASC4-205ENST00000558735 TMEM63BQ5T3F8 832 aa13.56□□□□□ -0.24
CASC4-205ENST00000558735 NSMFQ6X4W1 530 aa13.56□□□□□ -0.24
CASC4-205ENST00000558735 PCSK9Q8NBP7 692 aaKnown RBP13.56□□□□□ -0.24
CASC4-205ENST00000558735 PBX4Q9BYU1 374 aa13.56□□□□□ -0.24
CASC4-205ENST00000558735 PDGFCQ9NRA1 345 aa13.56□□□□□ -0.24
CASC4-205ENST00000558735 THEGQ9P2T0 379 aa13.56□□□□□ -0.24
CASC4-205ENST00000558735 GNEQ9Y223 722 aaKnown RBP13.56□□□□□ -0.24
CASC4-205ENST00000558735 SUPT16HQ9Y5B9 1047 aaKnown RBP13.56□□□□□ -0.24
CASC4-205ENST00000558735 FRMPD2Q68DX3 1309 aaPredicted RBP13.56□□□□□ -0.24
CASC4-205ENST00000558735 PTGS1P23219 599 aa13.55□□□□□ -0.24
CASC4-205ENST00000558735 PLA2G5P39877 138 aa13.55□□□□□ -0.24
CASC4-205ENST00000558735 ZNF543Q08ER8 600 aa13.55□□□□□ -0.24
CASC4-205ENST00000558735 BAATQ14032 418 aaPredicted RBP13.55□□□□□ -0.24
CASC4-205ENST00000558735 IQSEC1Q6DN90 963 aa13.55□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms