RNA–Protein interactions for RNA: ENST00000558428.5

SMAD3-205, Transcript of SMAD family member 3, humanhuman

TSL 4

Gene SMAD3, Length 554 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-205ENST00000558428 FBXO11Q86XK2 927 aa14.36□□□□□ -0.11
SMAD3-205ENST00000558428 HOMER1Q86YM7 354 aa14.36□□□□□ -0.11
SMAD3-205ENST00000558428 BRF1Q92994 677 aa14.36□□□□□ -0.11
SMAD3-205ENST00000558428 MAML3Q96JK9 1138 aa14.36□□□□□ -0.11
SMAD3-205ENST00000558428 TM6SF1Q9BZW5 370 aa14.36□□□□□ -0.11
SMAD3-205ENST00000558428 RIOX1Q9H6W3 641 aa14.36□□□□□ -0.11
SMAD3-205ENST00000558428 ZSWIM6Q9HCJ5 1215 aa14.36□□□□□ -0.11
SMAD3-205ENST00000558428 BRPF3Q9ULD4 1205 aa14.36□□□□□ -0.11
SMAD3-205ENST00000558428 NAP1L2Q9ULW6 460 aaPredicted RBP14.36□□□□□ -0.11
SMAD3-205ENST00000558428 DIS3Q9Y2L1 958 aaKnown RBP14.36□□□□□ -0.11
SMAD3-205ENST00000558428 CYP46A1Q9Y6A2 500 aa14.36□□□□□ -0.11
SMAD3-205ENST00000558428 PFASO15067 1338 aa14.36□□□□□ -0.11
SMAD3-205ENST00000558428 DNAJC25-GNG10A0A024R161 153 aa14.35□□□□□ -0.11
SMAD3-205ENST00000558428 KLF18A0A0U1RQI7 1052 aa14.35□□□□□ -0.11
SMAD3-205ENST00000558428 POTEFA5A3E0 1075 aa14.35□□□□□ -0.11
SMAD3-205ENST00000558428 NFIBO00712 420 aa14.35□□□□□ -0.11
SMAD3-205ENST00000558428 ZBTB5O15062 677 aa14.35□□□□□ -0.11
SMAD3-205ENST00000558428 ZBTB43O43298 467 aa14.35□□□□□ -0.11
SMAD3-205ENST00000558428 CYTH3O43739 400 aa14.35□□□□□ -0.11
SMAD3-205ENST00000558428 PLEKHA8P1O95397 391 aa14.35□□□□□ -0.11
SMAD3-205ENST00000558428 CYP2C19P33261 490 aa14.35□□□□□ -0.11
SMAD3-205ENST00000558428 CACNB2Q08289 660 aaPredicted RBP14.35□□□□□ -0.11
SMAD3-205ENST00000558428 MAP3K21Q5TCX8 1036 aa14.35□□□□□ -0.11
SMAD3-205ENST00000558428 FANCBQ8NB91 859 aa14.35□□□□□ -0.11
SMAD3-205ENST00000558428 MTMR8Q96EF0 704 aa14.35□□□□□ -0.11
SMAD3-205ENST00000558428 PIGSQ96S52 555 aa14.35□□□□□ -0.11
SMAD3-205ENST00000558428 HMX1Q9NP08 348 aaPredicted RBP14.35□□□□□ -0.11
SMAD3-205ENST00000558428 ABCB11O95342 1321 aa14.35□□□□□ -0.11
SMAD3-205ENST00000558428 RPTORQ8N122 1335 aa14.35□□□□□ -0.11
SMAD3-205ENST00000558428 POTEB2H3BUK9 544 aa14.34□□□□□ -0.11
SMAD3-205ENST00000558428 ANAPC15P60006 121 aa14.34□□□□□ -0.11
SMAD3-205ENST00000558428 APOBRQ0VD83 1088 aa14.34□□□□□ -0.11
SMAD3-205ENST00000558428 CLEC4DQ8WXI8 215 aa14.34□□□□□ -0.11
SMAD3-205ENST00000558428 PIBF1Q8WXW3 757 aa14.34□□□□□ -0.11
SMAD3-205ENST00000558428 LZTS2Q9BRK4 669 aa14.34□□□□□ -0.11
SMAD3-205ENST00000558428 SPZ1Q9BXG8 430 aa14.34□□□□□ -0.11
SMAD3-205ENST00000558428 AMNQ9BXJ7 453 aa14.34□□□□□ -0.11
SMAD3-205ENST00000558428 UPF3BQ9BZI7 483 aaKnown RBP14.34□□□□□ -0.11
SMAD3-205ENST00000558428 XRN2Q9H0D6 950 aaKnown RBP eCLIP14.34□□□□□ -0.11
SMAD3-205ENST00000558428 CYP39A1Q9NYL5 469 aa14.34□□□□□ -0.11
SMAD3-205ENST00000558428 LCTP09848 1927 aa14.34□□□□□ -0.11
SMAD3-205ENST00000558428 MKI67P46013 3256 aaKnown RBP14.33□□□□□ -0.11
SMAD3-205ENST00000558428 PTPDC1A2A3K4 754 aa14.33□□□□□ -0.12
SMAD3-205ENST00000558428 GOLGA8AA7E2F4 631 aa14.33□□□□□ -0.12
SMAD3-205ENST00000558428 GOLGA8BA8MQT2 603 aa14.33□□□□□ -0.12
SMAD3-205ENST00000558428 IGHA2P01877 340 aa14.33□□□□□ -0.12
SMAD3-205ENST00000558428 GJB1P08034 283 aa14.33□□□□□ -0.12
SMAD3-205ENST00000558428 SMARCA1P28370 1054 aa14.33□□□□□ -0.12
SMAD3-205ENST00000558428 CCND3P30281 292 aaPredicted RBP14.33□□□□□ -0.12
SMAD3-205ENST00000558428 CNTN2Q02246 1040 aa14.33□□□□□ -0.12
SMAD3-205ENST00000558428 RTN1Q16799 776 aa14.33□□□□□ -0.12
SMAD3-205ENST00000558428 TMTC3Q6ZXV5 915 aa14.33□□□□□ -0.12
SMAD3-205ENST00000558428 CMTR1Q8N1G2 835 aaKnown RBP14.33□□□□□ -0.12
SMAD3-205ENST00000558428 FBXL16Q8N461 479 aa14.33□□□□□ -0.12
SMAD3-205ENST00000558428 SRBD1Q8N5C6 995 aaKnown RBP14.33□□□□□ -0.12
SMAD3-205ENST00000558428 RRP36Q96EU6 259 aaKnown RBP14.33□□□□□ -0.12
SMAD3-205ENST00000558428 TINF2Q9BSI4 451 aa14.33□□□□□ -0.12
SMAD3-205ENST00000558428 AGXT2Q9BYV1 514 aa14.33□□□□□ -0.12
SMAD3-205ENST00000558428 PAK6Q9NQU5 681 aaPredicted RBP14.33□□□□□ -0.12
SMAD3-205ENST00000558428 RBM28Q9NW13 759 aaKnown RBP14.33□□□□□ -0.12
SMAD3-205ENST00000558428 MRPL11Q9Y3B7 192 aaKnown RBP14.33□□□□□ -0.12
SMAD3-205ENST00000558428 PNMA6FA0A0J9YX94 578 aa14.32□□□□□ -0.12
SMAD3-205ENST00000558428 PPP1R11O60927 126 aaPredicted RBP14.32□□□□□ -0.12
SMAD3-205ENST00000558428 EN2P19622 333 aaPredicted RBP14.32□□□□□ -0.12
SMAD3-205ENST00000558428 CALML3P27482 149 aa14.32□□□□□ -0.12
SMAD3-205ENST00000558428 METAP2P50579 478 aaKnown RBP eCLIP14.32□□□□□ -0.12
SMAD3-205ENST00000558428 RCAN1P53805 252 aa14.32□□□□□ -0.12
SMAD3-205ENST00000558428 TRAF1Q13077 416 aa14.32□□□□□ -0.12
SMAD3-205ENST00000558428 BAATQ14032 418 aaPredicted RBP14.32□□□□□ -0.12
SMAD3-205ENST00000558428 RNF207Q6ZRF8 634 aa14.32□□□□□ -0.12
SMAD3-205ENST00000558428 ZNF467Q7Z7K2 595 aaPredicted RBP14.32□□□□□ -0.12
SMAD3-205ENST00000558428 CCDC82Q8N4S0 544 aa14.32□□□□□ -0.12
SMAD3-205ENST00000558428 FAM133AQ8N9E0 248 aa14.32□□□□□ -0.12
SMAD3-205ENST00000558428 FGD4Q96M96 766 aa14.32□□□□□ -0.12
SMAD3-205ENST00000558428 DEFB118Q96PH6 123 aa14.32□□□□□ -0.12
SMAD3-205ENST00000558428 PDRG1Q9NUG6 133 aa14.32□□□□□ -0.12
SMAD3-205ENST00000558428 SEC63Q9UGP8 760 aaKnown RBP14.32□□□□□ -0.12
SMAD3-205ENST00000558428 PCDHA1Q9Y5I3 950 aa14.32□□□□□ -0.12
SMAD3-205ENST00000558428 CYBAP13498 195 aa14.31□□□□□ -0.12
SMAD3-205ENST00000558428 CNGA1P29973 690 aa14.31□□□□□ -0.12
SMAD3-205ENST00000558428 GJA8P48165 433 aa14.31□□□□□ -0.12
SMAD3-205ENST00000558428 RPS6P62753 249 aaKnown RBP14.31□□□□□ -0.12
SMAD3-205ENST00000558428 TOB2Q14106 344 aaPredicted RBP14.31□□□□□ -0.12
SMAD3-205ENST00000558428 PRAMEF19Q5SWL8 479 aa14.31□□□□□ -0.12
SMAD3-205ENST00000558428 SLC30A10Q6XR72 485 aa14.31□□□□□ -0.12
SMAD3-205ENST00000558428 MCF2L2Q86YR7 1114 aa14.31□□□□□ -0.12
SMAD3-205ENST00000558428 MSL3Q8N5Y2 521 aaKnown RBP14.31□□□□□ -0.12
SMAD3-205ENST00000558428 TRPV1Q8NER1 839 aa14.31□□□□□ -0.12
SMAD3-205ENST00000558428 U2AF1L4Q8WU68 220 aaKnown RBP14.31□□□□□ -0.12
SMAD3-205ENST00000558428 SYNGAP1Q96PV0 1343 aa14.31□□□□□ -0.12
SMAD3-205ENST00000558428 SOWAHBA6NEL2 793 aa14.3□□□□□ -0.12
SMAD3-205ENST00000558428 SGPL1O95470 568 aa14.3□□□□□ -0.12
SMAD3-205ENST00000558428 CDC27P30260 824 aa14.3□□□□□ -0.12
SMAD3-205ENST00000558428 MAMDC4Q6UXC1 1216 aa14.3□□□□□ -0.12
SMAD3-205ENST00000558428 ARMCX2Q7L311 632 aa14.3□□□□□ -0.12
SMAD3-205ENST00000558428 RGS22Q8NE09 1264 aa14.3□□□□□ -0.12
SMAD3-205ENST00000558428 TBC1D5Q92609 795 aa14.3□□□□□ -0.12
SMAD3-205ENST00000558428 IL17RAQ96F46 866 aa14.3□□□□□ -0.12
SMAD3-205ENST00000558428 PURBQ96QR8 312 aaKnown RBP14.3□□□□□ -0.12
SMAD3-205ENST00000558428 CNPY2Q9Y2B0 182 aa14.3□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms