RNA–Protein interactions for RNA: ENST00000558411.1

PCAT29-201, prostate cancer associated transcript 29, humanhuman

TSL 2 BASIC

Gene PCAT29, Length 2,121 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCAT29-201ENST00000558411 TIAM2Q8IVF5 1701 aa12.44□□□□□ -0.42
PCAT29-201ENST00000558411 SEC16BQ96JE7 1060 aa12.44□□□□□ -0.42
PCAT29-201ENST00000558411 EXOC1Q9NV70 894 aa12.44□□□□□ -0.42
PCAT29-201ENST00000558411 VPS54Q9P1Q0 977 aa12.44□□□□□ -0.42
PCAT29-201ENST00000558411 LRWD1Q9UFC0 647 aa12.44□□□□□ -0.42
PCAT29-201ENST00000558411 SLC12A6Q9UHW9 1150 aa12.44□□□□□ -0.42
PCAT29-201ENST00000558411 TAOK2Q9UL54 1235 aa12.44□□□□□ -0.42
PCAT29-201ENST00000558411 CAPN6Q9Y6Q1 641 aa12.44□□□□□ -0.42
PCAT29-201ENST00000558411 ZNF142P52746 1687 aaPredicted RBP12.44□□□□□ -0.42
PCAT29-201ENST00000558411 MYH6P13533 1939 aa12.44□□□□□ -0.42
PCAT29-201ENST00000558411 SCN11AQ9UI33 1791 aa12.44□□□□□ -0.42
PCAT29-201ENST00000558411 MATR3P43243 847 aaKnown RBP eCLIP12.44□□□□□ -0.42
PCAT29-201ENST00000558411 E2F5Q15329 346 aa12.44□□□□□ -0.42
PCAT29-201ENST00000558411 CDC37Q16543 378 aaPredicted RBP12.44□□□□□ -0.42
PCAT29-201ENST00000558411 RTN1Q16799 776 aa12.44□□□□□ -0.42
PCAT29-201ENST00000558411 CCDC96Q2M329 555 aa12.44□□□□□ -0.42
PCAT29-201ENST00000558411 CFAP221Q4G0U5 840 aa12.44□□□□□ -0.42
PCAT29-201ENST00000558411 CDCA2Q69YH5 1023 aaPredicted RBP12.44□□□□□ -0.42
PCAT29-201ENST00000558411 ADSSL1Q8N142 457 aa12.44□□□□□ -0.42
PCAT29-201ENST00000558411 CRACR2BQ8N4Y2 399 aaPredicted RBP12.44□□□□□ -0.42
PCAT29-201ENST00000558411 CUL5Q93034 780 aa12.44□□□□□ -0.42
PCAT29-201ENST00000558411 CCDC47Q96A33 483 aaKnown RBP12.44□□□□□ -0.42
PCAT29-201ENST00000558411 HINFPQ9BQA5 517 aa12.44□□□□□ -0.42
PCAT29-201ENST00000558411 MTA3Q9BTC8 594 aa12.44□□□□□ -0.42
PCAT29-201ENST00000558411 MYL10Q9BUA6 226 aa12.44□□□□□ -0.42
PCAT29-201ENST00000558411 PPANQ9NQ55 473 aaKnown RBP12.44□□□□□ -0.42
PCAT29-201ENST00000558411 RBM12Q9NTZ6 932 aaKnown RBP12.44□□□□□ -0.42
PCAT29-201ENST00000558411 BSDC1Q9NW68 430 aaPredicted RBP12.44□□□□□ -0.42
PCAT29-201ENST00000558411 MAGEC2Q9UBF1 373 aaPredicted RBP12.44□□□□□ -0.42
PCAT29-201ENST00000558411 FBXO3Q9UK99 471 aa12.44□□□□□ -0.42
PCAT29-201ENST00000558411 DENND2AQ9ULE3 1009 aa12.44□□□□□ -0.42
PCAT29-201ENST00000558411 NFU1Q9UMS0 254 aa12.44□□□□□ -0.42
PCAT29-201ENST00000558411 LEMD3Q9Y2U8 911 aa12.44□□□□□ -0.42
PCAT29-201ENST00000558411 TJP1Q07157 1748 aa12.44□□□□□ -0.42
PCAT29-201ENST00000558411 GSTA1P08263 222 aa12.43□□□□□ -0.42
PCAT29-201ENST00000558411 FAM153BP0C7A2 387 aa12.43□□□□□ -0.42
PCAT29-201ENST00000558411 TRIM21P19474 475 aaKnown RBP12.43□□□□□ -0.42
PCAT29-201ENST00000558411 CARSP49589 748 aaKnown RBP12.43□□□□□ -0.42
PCAT29-201ENST00000558411 INHBEP58166 350 aa12.43□□□□□ -0.42
PCAT29-201ENST00000558411 ELF3P78545 371 aaPredicted RBP12.43□□□□□ -0.42
PCAT29-201ENST00000558411 ALX1Q15699 326 aa12.43□□□□□ -0.42
PCAT29-201ENST00000558411 FAM153CQ494X1 144 aa12.43□□□□□ -0.42
PCAT29-201ENST00000558411 NFRKBQ6P4R8 1299 aa12.43□□□□□ -0.42
PCAT29-201ENST00000558411 PLBD2Q8NHP8 589 aa12.43□□□□□ -0.42
PCAT29-201ENST00000558411 NKX2-3Q8TAU0 364 aa12.43□□□□□ -0.42
PCAT29-201ENST00000558411 CCT6BQ92526 530 aa12.43□□□□□ -0.42
PCAT29-201ENST00000558411 CCDC42Q96M95 316 aa12.43□□□□□ -0.42
PCAT29-201ENST00000558411 NOD2Q9HC29 1040 aa12.43□□□□□ -0.42
PCAT29-201ENST00000558411 CEP126Q9P2H0 1117 aa12.43□□□□□ -0.42
PCAT29-201ENST00000558411 FAM153AQ9UHL3 310 aa12.43□□□□□ -0.42
PCAT29-201ENST00000558411 PCDHA13Q9Y5I0 950 aa12.43□□□□□ -0.42
PCAT29-201ENST00000558411 GRID2IPA4D2P6 1211 aa12.43□□□□□ -0.42
PCAT29-201ENST00000558411 GCOM1H8Y6P7 765 aaPredicted RBP12.43□□□□□ -0.42
PCAT29-201ENST00000558411 IFIT3O14879 490 aaKnown RBP12.43□□□□□ -0.42
PCAT29-201ENST00000558411 PJA2O43164 708 aa12.43□□□□□ -0.42
PCAT29-201ENST00000558411 COBLO75128 1261 aa12.43□□□□□ -0.42
PCAT29-201ENST00000558411 HEXIM1O94992 359 aaKnown RBP12.43□□□□□ -0.42
PCAT29-201ENST00000558411 RPN1P04843 607 aaKnown RBP12.43□□□□□ -0.42
PCAT29-201ENST00000558411 GLI1P08151 1106 aa12.43□□□□□ -0.42
PCAT29-201ENST00000558411 MYZAPP0CAP1 466 aa12.43□□□□□ -0.42
PCAT29-201ENST00000558411 XBP1P17861 261 aa12.43□□□□□ -0.42
PCAT29-201ENST00000558411 GCKP35557 465 aa12.43□□□□□ -0.42
PCAT29-201ENST00000558411 PRCPP42785 496 aa12.43□□□□□ -0.42
PCAT29-201ENST00000558411 LRRC24Q50LG9 513 aa12.43□□□□□ -0.42
PCAT29-201ENST00000558411 GKAP1Q5VSY0 366 aaPredicted RBP12.43□□□□□ -0.42
PCAT29-201ENST00000558411 AP1ARQ63HQ0 302 aa12.43□□□□□ -0.42
PCAT29-201ENST00000558411 MSL1Q68DK7 614 aa12.43□□□□□ -0.42
PCAT29-201ENST00000558411 RUFY4Q6ZNE9 571 aa12.43□□□□□ -0.42
PCAT29-201ENST00000558411 OXER1Q8TDS5 423 aa12.43□□□□□ -0.42
PCAT29-201ENST00000558411 TATDN2Q93075 761 aa12.43□□□□□ -0.42
PCAT29-201ENST00000558411 HVCN1Q96D96 273 aa12.43□□□□□ -0.42
PCAT29-201ENST00000558411 IFIH1Q9BYX4 1025 aaKnown RBP12.43□□□□□ -0.42
PCAT29-201ENST00000558411 CNNM2Q9H8M5 875 aa12.43□□□□□ -0.42
PCAT29-201ENST00000558411 EPB41L5Q9HCM4 733 aa12.43□□□□□ -0.42
PCAT29-201ENST00000558411 AGPAT5Q9NUQ2 364 aa12.43□□□□□ -0.42
PCAT29-201ENST00000558411 LIN7AO14910 233 aaPredicted RBP12.42□□□□□ -0.42
PCAT29-201ENST00000558411 ZNF263O14978 683 aa12.42□□□□□ -0.42
PCAT29-201ENST00000558411 PPIP5K2O43314 1243 aa12.42□□□□□ -0.42
PCAT29-201ENST00000558411 SSBP05455 408 aaKnown RBP eCLIP12.42□□□□□ -0.42
PCAT29-201ENST00000558411 ADD2P35612 726 aa12.42□□□□□ -0.42
PCAT29-201ENST00000558411 CYP27A1Q02318 531 aa12.42□□□□□ -0.42
PCAT29-201ENST00000558411 BYSLQ13895 437 aaKnown RBP12.42□□□□□ -0.42
PCAT29-201ENST00000558411 SPRED3Q2MJR0 410 aa12.42□□□□□ -0.42
PCAT29-201ENST00000558411 AGBL2Q5U5Z8 902 aa12.42□□□□□ -0.42
PCAT29-201ENST00000558411 RNF10Q8N5U6 811 aaKnown RBP12.42□□□□□ -0.42
PCAT29-201ENST00000558411 BLZF1Q9H2G9 400 aa12.42□□□□□ -0.42
PCAT29-201ENST00000558411 PLAAQ9Y263 795 aa12.42□□□□□ -0.42
PCAT29-201ENST00000558411 RIPOR2Q9Y4F9 1068 aa12.42□□□□□ -0.42
PCAT29-201ENST00000558411 MYH2Q9UKX2 1941 aa12.42□□□□□ -0.42
PCAT29-201ENST00000558411 RASSF10A6NK89 507 aa12.41□□□□□ -0.42
PCAT29-201ENST00000558411 ATP5J2-PTCD1G3V325 749 aa12.41□□□□□ -0.42
PCAT29-201ENST00000558411 BUB1BO60566 1050 aaPredicted RBP12.41□□□□□ -0.42
PCAT29-201ENST00000558411 PTCD1O75127 700 aaKnown RBP12.41□□□□□ -0.42
PCAT29-201ENST00000558411 ECM2O94769 699 aaPredicted RBP12.41□□□□□ -0.42
PCAT29-201ENST00000558411 MOCS3O95396 460 aa12.41□□□□□ -0.42
PCAT29-201ENST00000558411 KRT2P35908 639 aa12.41□□□□□ -0.42
PCAT29-201ENST00000558411 ZAP70P43403 619 aa12.41□□□□□ -0.42
PCAT29-201ENST00000558411 ATP2C1P98194 919 aaPredicted RBP12.41□□□□□ -0.42
PCAT29-201ENST00000558411 GUCY2DQ02846 1103 aa12.41□□□□□ -0.42
PCAT29-201ENST00000558411 KCNH5Q8NCM2 988 aa12.41□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms