RNA–Protein interactions for RNA: ENST00000558400.1

TPM1-213, Transcript of tropomyosin 1, humanhuman

TSL 2

Gene TPM1, Length 658 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-213ENST00000558400 A0A1W2PPC1 479 aa9.88□□□□□ -0.83
TPM1-213ENST00000558400 PALM3A6NDB9 673 aaPredicted RBP9.88□□□□□ -0.83
TPM1-213ENST00000558400 ASB14A6NK59 587 aa9.88□□□□□ -0.83
TPM1-213ENST00000558400 SPDYE4A6NLX3 237 aa9.88□□□□□ -0.83
TPM1-213ENST00000558400 B4DLN1 442 aa9.88□□□□□ -0.83
TPM1-213ENST00000558400 KLRF2D3W0D1 207 aa9.88□□□□□ -0.83
TPM1-213ENST00000558400 SEPT4O43236 478 aa9.88□□□□□ -0.83
TPM1-213ENST00000558400 PRC1O43663 620 aa9.88□□□□□ -0.83
TPM1-213ENST00000558400 PGK2P07205 417 aa9.88□□□□□ -0.83
TPM1-213ENST00000558400 GOLGA8HP0CJ92 632 aa9.88□□□□□ -0.83
TPM1-213ENST00000558400 CALM1P0DP23 149 aa9.88□□□□□ -0.83
TPM1-213ENST00000558400 CALM2P0DP24 149 aa9.88□□□□□ -0.83
TPM1-213ENST00000558400 CALM3P0DP25 149 aa9.88□□□□□ -0.83
TPM1-213ENST00000558400 SMARCA1P28370 1054 aa9.88□□□□□ -0.83
TPM1-213ENST00000558400 KIF5BP33176 963 aa9.88□□□□□ -0.83
TPM1-213ENST00000558400 GNAQP50148 359 aa9.88□□□□□ -0.83
TPM1-213ENST00000558400 MRPL12P52815 198 aaKnown RBP9.88□□□□□ -0.83
TPM1-213ENST00000558400 PWP2Q15269 919 aaKnown RBP9.88□□□□□ -0.83
TPM1-213ENST00000558400 SYNE3Q6ZMZ3 975 aa9.88□□□□□ -0.83
TPM1-213ENST00000558400 STOX1Q6ZVD7 989 aa9.88□□□□□ -0.83
TPM1-213ENST00000558400 NECAB2Q7Z6G3 386 aa9.88□□□□□ -0.83
TPM1-213ENST00000558400 ARRDC4Q8NCT1 418 aa9.88□□□□□ -0.83
TPM1-213ENST00000558400 MPHOSPH6Q99547 160 aaKnown RBP9.88□□□□□ -0.83
TPM1-213ENST00000558400 LZTS2Q9BRK4 669 aa9.88□□□□□ -0.83
TPM1-213ENST00000558400 HTATIP2Q9BUP3 242 aa9.88□□□□□ -0.83
TPM1-213ENST00000558400 UBA5Q9GZZ9 404 aa9.88□□□□□ -0.83
TPM1-213ENST00000558400 HOMER2Q9NSB8 354 aa9.88□□□□□ -0.83
TPM1-213ENST00000558400 ADD3Q9UEY8 706 aaKnown RBP9.88□□□□□ -0.83
TPM1-213ENST00000558400 DDX20Q9UHI6 824 aaKnown RBP9.88□□□□□ -0.83
TPM1-213ENST00000558400 CCDC69A6NI79 296 aa9.87□□□□□ -0.83
TPM1-213ENST00000558400 DHX16O60231 1041 aaKnown RBP9.87□□□□□ -0.83
TPM1-213ENST00000558400 FARP2O94887 1054 aaPredicted RBP9.87□□□□□ -0.83
TPM1-213ENST00000558400 CYBAP13498 195 aa9.87□□□□□ -0.83
TPM1-213ENST00000558400 PSMA5P28066 241 aa9.87□□□□□ -0.83
TPM1-213ENST00000558400 CCND3P30281 292 aaPredicted RBP9.87□□□□□ -0.83
TPM1-213ENST00000558400 TROAPQ12815 778 aa9.87□□□□□ -0.83
TPM1-213ENST00000558400 LHX8Q68G74 356 aa9.87□□□□□ -0.83
TPM1-213ENST00000558400 NFXL1Q6ZNB6 911 aa9.87□□□□□ -0.83
TPM1-213ENST00000558400 DHX32Q7L7V1 743 aaKnown RBP9.87□□□□□ -0.83
TPM1-213ENST00000558400 CHST3Q7LGC8 479 aa9.87□□□□□ -0.83
TPM1-213ENST00000558400 MCF2L2Q86YR7 1114 aa9.87□□□□□ -0.83
TPM1-213ENST00000558400 ADGRF4Q8IZF3 695 aa9.87□□□□□ -0.83
TPM1-213ENST00000558400 SAMD3Q8N6K7 520 aa9.87□□□□□ -0.83
TPM1-213ENST00000558400 FAM133AQ8N9E0 248 aa9.87□□□□□ -0.83
TPM1-213ENST00000558400 CTCFLQ8NI51 663 aaPredicted RBP9.87□□□□□ -0.83
TPM1-213ENST00000558400 COL25A1Q9BXS0 654 aaPredicted RBP9.87□□□□□ -0.83
TPM1-213ENST00000558400 ABHD16BQ9H3Z7 469 aa9.87□□□□□ -0.83
TPM1-213ENST00000558400 VAT1LQ9HCJ6 419 aa9.87□□□□□ -0.83
TPM1-213ENST00000558400 A1CFQ9NQ94 594 aaKnown RBP9.87□□□□□ -0.83
TPM1-213ENST00000558400 MRPL11Q9Y3B7 192 aaKnown RBP9.87□□□□□ -0.83
TPM1-213ENST00000558400 TAF6LQ9Y6J9 622 aa9.87□□□□□ -0.83
TPM1-213ENST00000558400 ALPK3Q96L96 1907 aa9.87□□□□□ -0.83
TPM1-213ENST00000558400 SOX1O00570 391 aaPredicted RBP9.86□□□□□ -0.83
TPM1-213ENST00000558400 DDAH1O94760 285 aa9.86□□□□□ -0.83
TPM1-213ENST00000558400 HSPA4P34932 840 aa9.86□□□□□ -0.83
TPM1-213ENST00000558400 ANTXR2P58335 489 aa9.86□□□□□ -0.83
TPM1-213ENST00000558400 SNAP25P60880 206 aa9.86□□□□□ -0.83
TPM1-213ENST00000558400 GRM4Q14833 912 aa9.86□□□□□ -0.83
TPM1-213ENST00000558400 CDC37Q16543 378 aaPredicted RBP9.86□□□□□ -0.83
TPM1-213ENST00000558400 NSMFQ6X4W1 530 aa9.86□□□□□ -0.83
TPM1-213ENST00000558400 RASGRP2Q7LDG7 609 aa9.86□□□□□ -0.83
TPM1-213ENST00000558400 UBE2Q1Q7Z7E8 422 aa9.86□□□□□ -0.83
TPM1-213ENST00000558400 SGMS1Q86VZ5 419 aa9.86□□□□□ -0.83
TPM1-213ENST00000558400 FBXO11Q86XK2 927 aa9.86□□□□□ -0.83
TPM1-213ENST00000558400 STAG2Q8N3U4 1231 aa9.86□□□□□ -0.83
TPM1-213ENST00000558400 KCNB2Q92953 911 aa9.86□□□□□ -0.83
TPM1-213ENST00000558400 SHISA4Q96DD7 197 aa9.86□□□□□ -0.83
TPM1-213ENST00000558400 AMNQ9BXJ7 453 aa9.86□□□□□ -0.83
TPM1-213ENST00000558400 RIOX1Q9H6W3 641 aa9.86□□□□□ -0.83
TPM1-213ENST00000558400 JMJD4Q9H9V9 463 aa9.86□□□□□ -0.83
TPM1-213ENST00000558400 LY9Q9HBG7 655 aa9.86□□□□□ -0.83
TPM1-213ENST00000558400 MAP3K20Q9NYL2 800 aaKnown RBP9.86□□□□□ -0.83
TPM1-213ENST00000558400 CYP39A1Q9NYL5 469 aa9.86□□□□□ -0.83
TPM1-213ENST00000558400 MAD2L2Q9UI95 211 aa9.86□□□□□ -0.83
TPM1-213ENST00000558400 FAM184BQ9ULE4 1060 aa9.86□□□□□ -0.83
TPM1-213ENST00000558400 SLC12A7Q9Y666 1083 aa9.86□□□□□ -0.83
TPM1-213ENST00000558400 ABCB11O95342 1321 aa9.85□□□□□ -0.83
TPM1-213ENST00000558400 UNC80Q8N2C7 3258 aa9.85□□□□□ -0.83
TPM1-213ENST00000558400 PNMA6FA0A0J9YX94 578 aa9.85□□□□□ -0.83
TPM1-213ENST00000558400 PTPDC1A2A3K4 754 aa9.85□□□□□ -0.83
TPM1-213ENST00000558400 SH2B2O14492 632 aaPredicted RBP9.85□□□□□ -0.83
TPM1-213ENST00000558400 ZBTB5O15062 677 aa9.85□□□□□ -0.83
TPM1-213ENST00000558400 RARBP10826 455 aa9.85□□□□□ -0.83
TPM1-213ENST00000558400 AKR1A1P14550 325 aa9.85□□□□□ -0.83
TPM1-213ENST00000558400 FGD1P98174 961 aa9.85□□□□□ -0.83
TPM1-213ENST00000558400 EXOSC10Q01780 885 aaKnown RBP9.85□□□□□ -0.83
TPM1-213ENST00000558400 ACVR2BQ13705 512 aa9.85□□□□□ -0.83
TPM1-213ENST00000558400 BAATQ14032 418 aaPredicted RBP9.85□□□□□ -0.83
TPM1-213ENST00000558400 PPP2R5BQ15173 497 aa9.85□□□□□ -0.83
TPM1-213ENST00000558400 MUM1L1Q5H9M0 696 aa9.85□□□□□ -0.83
TPM1-213ENST00000558400 PRAMEF19Q5SWL8 479 aa9.85□□□□□ -0.83
TPM1-213ENST00000558400 RNF207Q6ZRF8 634 aa9.85□□□□□ -0.83
TPM1-213ENST00000558400 ZNF654Q8IZM8 581 aa9.85□□□□□ -0.83
TPM1-213ENST00000558400 DNERQ8NFT8 737 aa9.85□□□□□ -0.83
TPM1-213ENST00000558400 NUP133Q8WUM0 1156 aa9.85□□□□□ -0.83
TPM1-213ENST00000558400 DPF3Q92784 378 aa9.85□□□□□ -0.83
TPM1-213ENST00000558400 MTMR8Q96EF0 704 aa9.85□□□□□ -0.83
TPM1-213ENST00000558400 LRCH3Q96II8 777 aa9.85□□□□□ -0.83
TPM1-213ENST00000558400 PAWRQ96IZ0 340 aaKnown RBP9.85□□□□□ -0.83
TPM1-213ENST00000558400 NR2E3Q9Y5X4 410 aa9.85□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms