RNA–Protein interactions for RNA: ENST00000558347.5

TPM1-212, Transcript of tropomyosin 1, humanhuman

TSL 5

Gene TPM1, Length 1,525 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-212ENST00000558347 PSMA5P28066 241 aa11.96□□□□□ -0.49
TPM1-212ENST00000558347 SLC16A2P36021 539 aa11.96□□□□□ -0.49
TPM1-212ENST00000558347 IMMTQ16891 758 aaKnown RBP11.96□□□□□ -0.49
TPM1-212ENST00000558347 LRRC26Q2I0M4 334 aa11.96□□□□□ -0.49
TPM1-212ENST00000558347 CCDC96Q2M329 555 aa11.96□□□□□ -0.49
TPM1-212ENST00000558347 GJC2Q5T442 439 aaPredicted RBP11.96□□□□□ -0.49
TPM1-212ENST00000558347 CCDC174Q6PII3 467 aa11.96□□□□□ -0.49
TPM1-212ENST00000558347 GAS2L3Q86XJ1 694 aa11.96□□□□□ -0.49
TPM1-212ENST00000558347 CHST13Q8NET6 341 aa11.96□□□□□ -0.49
TPM1-212ENST00000558347 DDX11Q96FC9 970 aa11.96□□□□□ -0.49
TPM1-212ENST00000558347 FGD4Q96M96 766 aa11.96□□□□□ -0.49
TPM1-212ENST00000558347 PPP1R9BQ96SB3 815 aa11.96□□□□□ -0.49
TPM1-212ENST00000558347 ZKSCAN3Q9BRR0 538 aa11.96□□□□□ -0.49
TPM1-212ENST00000558347 PRO3102Q9H379 93 aa11.96□□□□□ -0.49
TPM1-212ENST00000558347 ZSWIM6Q9HCJ5 1215 aa11.96□□□□□ -0.49
TPM1-212ENST00000558347 RBM27Q9P2N5 1060 aaKnown RBP11.96□□□□□ -0.49
TPM1-212ENST00000558347 FBXO40Q9UH90 709 aa11.96□□□□□ -0.49
TPM1-212ENST00000558347 DNM1LO00429 736 aa11.96□□□□□ -0.5
TPM1-212ENST00000558347 ANKRD35Q8N283 1001 aa11.96□□□□□ -0.5
TPM1-212ENST00000558347 ANP32BQ92688 251 aaKnown RBP11.96□□□□□ -0.5
TPM1-212ENST00000558347 ESR2Q92731 530 aa11.96□□□□□ -0.5
TPM1-212ENST00000558347 SENP6Q9GZR1 1112 aaPredicted RBP11.96□□□□□ -0.5
TPM1-212ENST00000558347 ACAD9Q9H845 621 aa11.96□□□□□ -0.5
TPM1-212ENST00000558347 RNF146Q9NTX7 359 aa11.96□□□□□ -0.5
TPM1-212ENST00000558347 NRBP1Q9UHY1 535 aa11.96□□□□□ -0.5
TPM1-212ENST00000558347 ZMYND8Q9ULU4 1186 aaPredicted RBP11.96□□□□□ -0.5
TPM1-212ENST00000558347 FRMPD2Q68DX3 1309 aaPredicted RBP11.96□□□□□ -0.5
TPM1-212ENST00000558347 B4E1Z4 1266 aa11.95□□□□□ -0.5
TPM1-212ENST00000558347 KDM4AO75164 1064 aa11.95□□□□□ -0.5
TPM1-212ENST00000558347 BRD1O95696 1058 aa11.95□□□□□ -0.5
TPM1-212ENST00000558347 SNAI1O95863 264 aaPredicted RBP11.95□□□□□ -0.5
TPM1-212ENST00000558347 MBD3O95983 291 aa11.95□□□□□ -0.5
TPM1-212ENST00000558347 PDHBP11177 359 aa11.95□□□□□ -0.5
TPM1-212ENST00000558347 ALAS1P13196 640 aa11.95□□□□□ -0.5
TPM1-212ENST00000558347 SYN1P17600 705 aa11.95□□□□□ -0.5
TPM1-212ENST00000558347 ADCK5Q3MIX3 580 aa11.95□□□□□ -0.5
TPM1-212ENST00000558347 MAMDC4Q6UXC1 1216 aa11.95□□□□□ -0.5
TPM1-212ENST00000558347 BTNL9Q6UXG8 535 aa11.95□□□□□ -0.5
TPM1-212ENST00000558347 LENG1Q96BZ8 264 aaPredicted RBP11.95□□□□□ -0.5
TPM1-212ENST00000558347 JAKMIP1Q96N16 626 aaKnown RBP11.95□□□□□ -0.5
TPM1-212ENST00000558347 TTC14Q96N46 770 aa11.95□□□□□ -0.5
TPM1-212ENST00000558347 RANBP17Q9H2T7 1088 aaKnown RBP11.95□□□□□ -0.5
TPM1-212ENST00000558347 GPCPD1Q9NPB8 672 aa11.95□□□□□ -0.5
TPM1-212ENST00000558347 A1CFQ9NQ94 594 aaKnown RBP11.95□□□□□ -0.5
TPM1-212ENST00000558347 ZDHHC9Q9Y397 364 aa11.95□□□□□ -0.5
TPM1-212ENST00000558347 TAF6LQ9Y6J9 622 aa11.95□□□□□ -0.5
TPM1-212ENST00000558347 SYNGAP1Q96PV0 1343 aa11.95□□□□□ -0.5
TPM1-212ENST00000558347 MCM3APO60318 1980 aa11.94□□□□□ -0.5
TPM1-212ENST00000558347 HMGB1P09429 215 aaKnown RBP11.94□□□□□ -0.5
TPM1-212ENST00000558347 LCTP09848 1927 aa11.94□□□□□ -0.5
TPM1-212ENST00000558347 SNHG28P0DPA3 235 aa11.94□□□□□ -0.5
TPM1-212ENST00000558347 FXR1P51114 621 aaKnown RBP eCLIP11.94□□□□□ -0.5
TPM1-212ENST00000558347 ATN1P54259 1190 aaPredicted RBP11.94□□□□□ -0.5
TPM1-212ENST00000558347 CNTN2Q02246 1040 aa11.94□□□□□ -0.5
TPM1-212ENST00000558347 LRRC41Q15345 812 aa11.94□□□□□ -0.5
TPM1-212ENST00000558347 MUM1L1Q5H9M0 696 aa11.94□□□□□ -0.5
TPM1-212ENST00000558347 SYDE2Q5VT97 1194 aa11.94□□□□□ -0.5
TPM1-212ENST00000558347 RUFY3Q7L099 469 aa11.94□□□□□ -0.5
TPM1-212ENST00000558347 ZNF467Q7Z7K2 595 aaPredicted RBP11.94□□□□□ -0.5
TPM1-212ENST00000558347 DGKHQ86XP1 1220 aa11.94□□□□□ -0.5
TPM1-212ENST00000558347 MSL3Q8N5Y2 521 aaKnown RBP11.94□□□□□ -0.5
TPM1-212ENST00000558347 ARRDC4Q8NCT1 418 aa11.94□□□□□ -0.5
TPM1-212ENST00000558347 TRIM44Q96DX7 344 aaPredicted RBP11.94□□□□□ -0.5
TPM1-212ENST00000558347 TRERF1Q96PN7 1200 aa11.94□□□□□ -0.5
TPM1-212ENST00000558347 ALDH8A1Q9H2A2 487 aaPredicted RBP11.94□□□□□ -0.5
TPM1-212ENST00000558347 CNPY2Q9Y2B0 182 aa11.94□□□□□ -0.5
TPM1-212ENST00000558347 LAMA3Q16787 3333 aa11.94□□□□□ -0.5
TPM1-212ENST00000558347 TRIOBPQ9H2D6 2365 aa11.93□□□□□ -0.5
TPM1-212ENST00000558347 ASTN1O14525 1302 aa11.93□□□□□ -0.5
TPM1-212ENST00000558347 KBTBD13C9JR72 458 aa11.93□□□□□ -0.5
TPM1-212ENST00000558347 E7EWF7 191 aa11.93□□□□□ -0.5
TPM1-212ENST00000558347 MYCNP04198 464 aaPredicted RBP11.93□□□□□ -0.5
TPM1-212ENST00000558347 ICAM1P05362 532 aa11.93□□□□□ -0.5
TPM1-212ENST00000558347 AKR1A1P14550 325 aa11.93□□□□□ -0.5
TPM1-212ENST00000558347 CASTP20810 708 aaKnown RBP11.93□□□□□ -0.5
TPM1-212ENST00000558347 NASPP49321 788 aaPredicted RBP11.93□□□□□ -0.5
TPM1-212ENST00000558347 ZNF543Q08ER8 600 aa11.93□□□□□ -0.5
TPM1-212ENST00000558347 TKFCQ3LXA3 575 aa11.93□□□□□ -0.5
TPM1-212ENST00000558347 STOX1Q6ZVD7 989 aa11.93□□□□□ -0.5
TPM1-212ENST00000558347 FAM133AQ8N9E0 248 aa11.93□□□□□ -0.5
TPM1-212ENST00000558347 NEK1Q96PY6 1258 aa11.93□□□□□ -0.5
TPM1-212ENST00000558347 UPF3BQ9BZI7 483 aaKnown RBP11.93□□□□□ -0.5
TPM1-212ENST00000558347 ZSWIM5Q9P217 1185 aa11.93□□□□□ -0.5
TPM1-212ENST00000558347 ZHX1Q9UKY1 873 aaPredicted RBP11.93□□□□□ -0.5
TPM1-212ENST00000558347 CCPG1Q9ULG6 757 aa11.93□□□□□ -0.5
TPM1-212ENST00000558347 CYP46A1Q9Y6A2 500 aa11.93□□□□□ -0.5
TPM1-212ENST00000558347 TNKSO95271 1327 aa11.92□□□□□ -0.5
TPM1-212ENST00000558347 SOWAHBA6NEL2 793 aa11.92□□□□□ -0.5
TPM1-212ENST00000558347 ESPNB1AK53 854 aa11.92□□□□□ -0.5
TPM1-212ENST00000558347 POTEB2H3BUK9 544 aa11.92□□□□□ -0.5
TPM1-212ENST00000558347 ADCY6O43306 1168 aa11.92□□□□□ -0.5
TPM1-212ENST00000558347 PGK1P00558 417 aa11.92□□□□□ -0.5
TPM1-212ENST00000558347 GOLGA8HP0CJ92 632 aa11.92□□□□□ -0.5
TPM1-212ENST00000558347 RARBP10826 455 aa11.92□□□□□ -0.5
TPM1-212ENST00000558347 RPS6KB1P23443 525 aa11.92□□□□□ -0.5
TPM1-212ENST00000558347 NT5C2P49902 561 aa11.92□□□□□ -0.5
TPM1-212ENST00000558347 PKP1Q13835 747 aa11.92□□□□□ -0.5
TPM1-212ENST00000558347 ZSCAN23Q3MJ62 389 aa11.92□□□□□ -0.5
TPM1-212ENST00000558347 BLOC1S2Q6QNY1 142 aa11.92□□□□□ -0.5
TPM1-212ENST00000558347 ARMCX2Q7L311 632 aa11.92□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms