RNA–Protein interactions for RNA: ENST00000558211.2

HMGB1P8-201, Transcript of high mobility group box 1 pseudogene 8, humanhuman

BASIC

Gene HMGB1P8, Length 949 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P8-201ENST00000558211 KIAA1755Q5JYT7 1200 aa14.07□□□□□ -0.16
HMGB1P8-201ENST00000558211 RCSD1Q6JBY9 416 aa14.07□□□□□ -0.16
HMGB1P8-201ENST00000558211 NFXL1Q6ZNB6 911 aa14.07□□□□□ -0.16
HMGB1P8-201ENST00000558211 TRIM67Q6ZTA4 783 aa14.07□□□□□ -0.16
HMGB1P8-201ENST00000558211 RUFY3Q7L099 469 aa14.07□□□□□ -0.16
HMGB1P8-201ENST00000558211 PRRT2Q7Z6L0 340 aaPredicted RBP14.07□□□□□ -0.16
HMGB1P8-201ENST00000558211 DGKHQ86XP1 1220 aa14.07□□□□□ -0.16
HMGB1P8-201ENST00000558211 IGDCC4Q8TDY8 1250 aa14.07□□□□□ -0.16
HMGB1P8-201ENST00000558211 BRI3BPQ8WY22 251 aa14.07□□□□□ -0.16
HMGB1P8-201ENST00000558211 GPKOWQ92917 476 aaPredicted RBP eCLIP14.07□□□□□ -0.16
HMGB1P8-201ENST00000558211 MKL1Q969V6 931 aa14.07□□□□□ -0.16
HMGB1P8-201ENST00000558211 TTC14Q96N46 770 aa14.07□□□□□ -0.16
HMGB1P8-201ENST00000558211 KIAA1683Q9H0B3 1180 aa14.07□□□□□ -0.16
HMGB1P8-201ENST00000558211 VCPKMTQ9H867 229 aa14.07□□□□□ -0.16
HMGB1P8-201ENST00000558211 SENP2Q9HC62 589 aa14.07□□□□□ -0.16
HMGB1P8-201ENST00000558211 PKD2L1Q9P0L9 805 aa14.07□□□□□ -0.16
HMGB1P8-201ENST00000558211 F5H6K3 240 aa14.06□□□□□ -0.16
HMGB1P8-201ENST00000558211 GDF9O60383 454 aa14.06□□□□□ -0.16
HMGB1P8-201ENST00000558211 KLRC3Q07444 240 aa14.06□□□□□ -0.16
HMGB1P8-201ENST00000558211 SREBF2Q12772 1141 aa14.06□□□□□ -0.16
HMGB1P8-201ENST00000558211 SEC23AQ15436 765 aa14.06□□□□□ -0.16
HMGB1P8-201ENST00000558211 SLFN13Q68D06 897 aa14.06□□□□□ -0.16
HMGB1P8-201ENST00000558211 Q6ZUG5 572 aa14.06□□□□□ -0.16
HMGB1P8-201ENST00000558211 FASTKD5Q7L8L6 764 aaKnown RBP14.06□□□□□ -0.16
HMGB1P8-201ENST00000558211 TMEM87BQ96K49 555 aa14.06□□□□□ -0.16
HMGB1P8-201ENST00000558211 TM6SF1Q9BZW5 370 aa14.06□□□□□ -0.16
HMGB1P8-201ENST00000558211 NAP1L2Q9ULW6 460 aaPredicted RBP14.06□□□□□ -0.16
HMGB1P8-201ENST00000558211 CCDC69A6NI79 296 aa14.05□□□□□ -0.16
HMGB1P8-201ENST00000558211 BTBD19C9JJ37 291 aa14.05□□□□□ -0.16
HMGB1P8-201ENST00000558211 SH2B2O14492 632 aaPredicted RBP14.05□□□□□ -0.16
HMGB1P8-201ENST00000558211 NDUFB10O96000 172 aa14.05□□□□□ -0.16
HMGB1P8-201ENST00000558211 NOVP48745 357 aa14.05□□□□□ -0.16
HMGB1P8-201ENST00000558211 RBM25P49756 843 aaKnown RBP14.05□□□□□ -0.16
HMGB1P8-201ENST00000558211 TREML2Q5T2D2 321 aa14.05□□□□□ -0.16
HMGB1P8-201ENST00000558211 RASGRP2Q7LDG7 609 aa14.05□□□□□ -0.16
HMGB1P8-201ENST00000558211 RAB11FIP4Q86YS3 637 aa14.05□□□□□ -0.16
HMGB1P8-201ENST00000558211 PNMA1Q8ND90 353 aa14.05□□□□□ -0.16
HMGB1P8-201ENST00000558211 TBC1D32Q96NH3 1257 aa14.05□□□□□ -0.16
HMGB1P8-201ENST00000558211 NUP88Q99567 741 aaPredicted RBP14.05□□□□□ -0.16
HMGB1P8-201ENST00000558211 PTPN18Q99952 460 aa14.05□□□□□ -0.16
HMGB1P8-201ENST00000558211 LY9Q9HBG7 655 aa14.05□□□□□ -0.16
HMGB1P8-201ENST00000558211 PDRG1Q9NUG6 133 aa14.05□□□□□ -0.16
HMGB1P8-201ENST00000558211 IGF2BP3O00425 579 aaKnown RBP eCLIP14.04□□□□□ -0.16
HMGB1P8-201ENST00000558211 WNT7AO00755 349 aa14.04□□□□□ -0.16
HMGB1P8-201ENST00000558211 VCAM1P19320 739 aa14.04□□□□□ -0.16
HMGB1P8-201ENST00000558211 MAP2K2P36507 400 aa14.04□□□□□ -0.16
HMGB1P8-201ENST00000558211 NEK4P51957 841 aa14.04□□□□□ -0.16
HMGB1P8-201ENST00000558211 INHBEP58166 350 aa14.04□□□□□ -0.16
HMGB1P8-201ENST00000558211 MOGSQ13724 837 aa14.04□□□□□ -0.16
HMGB1P8-201ENST00000558211 CCDC96Q2M329 555 aa14.04□□□□□ -0.16
HMGB1P8-201ENST00000558211 FAM83BQ5T0W9 1011 aa14.04□□□□□ -0.16
HMGB1P8-201ENST00000558211 GPAT2Q6NUI2 795 aa14.04□□□□□ -0.16
HMGB1P8-201ENST00000558211 SH3RF1Q7Z6J0 888 aa14.04□□□□□ -0.16
HMGB1P8-201ENST00000558211 FAM43AQ8N2R8 423 aa14.04□□□□□ -0.16
HMGB1P8-201ENST00000558211 NUP133Q8WUM0 1156 aa14.04□□□□□ -0.16
HMGB1P8-201ENST00000558211 ANKS1AQ92625 1134 aa14.04□□□□□ -0.16
HMGB1P8-201ENST00000558211 BRF1Q92994 677 aa14.04□□□□□ -0.16
HMGB1P8-201ENST00000558211 TANGO6Q9C0B7 1094 aa14.04□□□□□ -0.16
HMGB1P8-201ENST00000558211 RPAP3Q9H6T3 665 aaPredicted RBP14.04□□□□□ -0.16
HMGB1P8-201ENST00000558211 PDHXO00330 501 aa14.03□□□□□ -0.16
HMGB1P8-201ENST00000558211 SLC1A4P43007 532 aa14.03□□□□□ -0.16
HMGB1P8-201ENST00000558211 TM4SF4P48230 202 aa14.03□□□□□ -0.16
HMGB1P8-201ENST00000558211 APOBRQ0VD83 1088 aa14.03□□□□□ -0.16
HMGB1P8-201ENST00000558211 OTUD7BQ6GQQ9 843 aa14.03□□□□□ -0.16
HMGB1P8-201ENST00000558211 PDXDC2PQ6P474 469 aa14.03□□□□□ -0.16
HMGB1P8-201ENST00000558211 KCTD1Q719H9 257 aa14.03□□□□□ -0.16
HMGB1P8-201ENST00000558211 NOL8Q76FK4 1167 aaKnown RBP14.03□□□□□ -0.16
HMGB1P8-201ENST00000558211 CATIPQ7Z7H3 387 aa14.03□□□□□ -0.16
HMGB1P8-201ENST00000558211 TMTC2Q8N394 836 aa14.03□□□□□ -0.16
HMGB1P8-201ENST00000558211 DNAJC5GQ8N7S2 189 aa14.03□□□□□ -0.16
HMGB1P8-201ENST00000558211 GMCL1P1Q8NEA9 526 aa14.03□□□□□ -0.16
HMGB1P8-201ENST00000558211 LPAR1Q92633 364 aa14.03□□□□□ -0.16
HMGB1P8-201ENST00000558211 FOXJ1Q92949 421 aa14.03□□□□□ -0.16
HMGB1P8-201ENST00000558211 C12orf42Q96LP6 360 aa14.03□□□□□ -0.16
HMGB1P8-201ENST00000558211 KIF2CQ99661 725 aa14.03□□□□□ -0.16
HMGB1P8-201ENST00000558211 MTA3Q9BTC8 594 aa14.03□□□□□ -0.16
HMGB1P8-201ENST00000558211 MYL10Q9BUA6 226 aa14.03□□□□□ -0.16
HMGB1P8-201ENST00000558211 AGTPBP1Q9UPW5 1226 aa14.03□□□□□ -0.16
HMGB1P8-201ENST00000558211 FRMPD2Q68DX3 1309 aaPredicted RBP14.03□□□□□ -0.16
HMGB1P8-201ENST00000558211 WDR19Q8NEZ3 1342 aa14.03□□□□□ -0.16
HMGB1P8-201ENST00000558211 LOC285556D6RIA3 1793 aa14.02□□□□□ -0.16
HMGB1P8-201ENST00000558211 KLF18A0A0U1RQI7 1052 aa14.02□□□□□ -0.17
HMGB1P8-201ENST00000558211 USP17L15C9J2P7 530 aa14.02□□□□□ -0.17
HMGB1P8-201ENST00000558211 USP17L13C9JLJ4 530 aa14.02□□□□□ -0.17
HMGB1P8-201ENST00000558211 USP17L11C9JVI0 530 aa14.02□□□□□ -0.17
HMGB1P8-201ENST00000558211 USP17L18D6R9N7 530 aa14.02□□□□□ -0.17
HMGB1P8-201ENST00000558211 USP17L22D6RA61 530 aa14.02□□□□□ -0.17
HMGB1P8-201ENST00000558211 USP17L17D6RBQ6 530 aa14.02□□□□□ -0.17
HMGB1P8-201ENST00000558211 USP17L19D6RCP7 530 aa14.02□□□□□ -0.17
HMGB1P8-201ENST00000558211 USP17L20D6RJB6 530 aa14.02□□□□□ -0.17
HMGB1P8-201ENST00000558211 WDR46O15213 610 aaKnown RBP14.02□□□□□ -0.17
HMGB1P8-201ENST00000558211 GOLGA8HP0CJ92 632 aa14.02□□□□□ -0.17
HMGB1P8-201ENST00000558211 BMP3P12645 472 aa14.02□□□□□ -0.17
HMGB1P8-201ENST00000558211 RXRAP19793 462 aa14.02□□□□□ -0.17
HMGB1P8-201ENST00000558211 LIFRP42702 1097 aa14.02□□□□□ -0.17
HMGB1P8-201ENST00000558211 PRR20EP86478 221 aa14.02□□□□□ -0.17
HMGB1P8-201ENST00000558211 PRR20CP86479 221 aa14.02□□□□□ -0.17
HMGB1P8-201ENST00000558211 PRR20DP86480 221 aa14.02□□□□□ -0.17
HMGB1P8-201ENST00000558211 PRR20BP86481 221 aa14.02□□□□□ -0.17
HMGB1P8-201ENST00000558211 PRR20AP86496 221 aa14.02□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms